CX287063

Overview
NameCX287063
Unique NameCX287063
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length320
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_RICTY (Chaperone protein dnaK OS=Rickettsia typhi GN=dnaK PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 4.140e-38
Identity = 77/106 (72.64%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA     D+ EV+LVGGMTR+PKVQE V + FG+ P KGVNPDE VALGAAIQGG+L  +V ++LLLDVTPLSLGIETLGG+FTRLI+RNTTI +KKSQVFSTA D
Sbjct:  320 DAGFKPTDIQEVVLVGGMTRMPKVQEAVKKFFGREPHKGVNPDEVVALGAAIQGGVLNKEVTDILLLDVTPLSLGIETLGGVFTRLIDRNTTIPSKKSQVFSTADD 425
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_RICFE (Chaperone protein dnaK OS=Rickettsia felis GN=dnaK PE=2 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 4.140e-38
Identity = 77/106 (72.64%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA     D+ EV+LVGGMTR+PKVQE V + FG+ P KGVNPDE VALGAAIQGG+L  +V ++LLLDVTPLSLGIETLGG+FTRLI+RNTTI +KKSQVFSTA D
Sbjct:  320 DAGFKPTDIQEVVLVGGMTRMPKVQEAVKKFFGREPHKGVNPDEVVALGAAIQGGVLNKEVTDILLLDVTPLSLGIETLGGVFTRLIDRNTTIPSKKSQVFSTADD 425
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_METSS (Chaperone protein dnaK OS=Methylovorus sp. (strain SS1 / DSM 11726) GN=dnaK PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 4.140e-38
Identity = 76/106 (71.70%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   D+ +V+LVGG TR+PKVQE V E FGK P K VNPDEAVA+GAAIQGG+L+GDVK++LLLDVTPLSLGIETLGG+ T+LI +NTTI TK SQVFSTA D
Sbjct:  326 DAGVKPSDIQDVILVGGQTRMPKVQEKVKEFFGKEPRKDVNPDEAVAVGAAIQGGVLQGDVKDVLLLDVTPLSLGIETLGGVMTKLIKKNTTIPTKASQVFSTAED 431
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_FRATM (Chaperone protein dnaK OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=dnaK PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 4.140e-38
Identity = 77/106 (72.64%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+ EVLLVGG TR+P VQE V E FGK P K +NPDEAVA+GAAIQGG+L GDVK++LLLDVTPLSLGIET+GG+ T+LI RNTTI TKKSQVFSTA D
Sbjct:  328 DAGLSKSDITEVLLVGGQTRMPLVQEKVKEFFGKEPRKDMNPDEAVAVGAAIQGGVLAGDVKDVLLLDVTPLSLGIETMGGVMTKLIERNTTIPTKKSQVFSTAED 433
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_BRECH (Chaperone protein dnaK OS=Brevibacillus choshinensis GN=dnaK PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 4.140e-38
Identity = 74/106 (69.81%), Postives = 90/106 (84.91%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +T  ++D+V+LVGG TR+P VQE + +  GK P KGVNPDE VALGAA+Q G+L GDVK+++LLDVTPLSLGIETLGG+FT+LI+RNTTI T KSQVFSTAAD
Sbjct:  296 DAGLTPNEIDKVILVGGSTRIPAVQEAIKKFTGKEPHKGVNPDEVVALGAAVQAGVLTGDVKDVVLLDVTPLSLGIETLGGVFTKLIDRNTTIPTSKSQVFSTAAD 401
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_NITOC (Chaperone protein dnaK OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=dnaK PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 5.407e-38
Identity = 75/106 (70.75%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+DEV+LVGG TR+PKVQE   E FGK P K VNPDEAVA+GAAIQ G+L G+VKE+LLLDVTPLSLGIETLGG+ T+LI +NTTI T+K+QVFSTA D
Sbjct:  326 DAKLSASDIDEVILVGGQTRMPKVQEAAKEFFGKEPRKDVNPDEAVAVGAAIQAGVLGGEVKEVLLLDVTPLSLGIETLGGVMTKLIEKNTTIPTRKTQVFSTAED 431
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_LEPIN (Chaperone protein dnaK OS=Leptospira interrogans GN=dnaK PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 5.407e-38
Identity = 74/106 (69.81%), Postives = 90/106 (84.91%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   D++EV+LVGG  R+P VQE+V ++FGK P+K VNPDE VA+GAAIQGG+L G+V ++LLLDVTPLSLGIETLGG+ T+LI RNTTI TKKSQVFSTAAD
Sbjct:  322 DAGLKASDINEVILVGGSIRIPAVQELVKQVFGKEPNKSVNPDEVVAIGAAIQGGVLAGEVSDVLLLDVTPLSLGIETLGGVMTKLIERNTTIPTKKSQVFSTAAD 427
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_LEPIC (Chaperone protein dnaK OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=dnaK PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 5.407e-38
Identity = 74/106 (69.81%), Postives = 90/106 (84.91%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   D++EV+LVGG  R+P VQE+V ++FGK P+K VNPDE VA+GAAIQGG+L G+V ++LLLDVTPLSLGIETLGG+ T+LI RNTTI TKKSQVFSTAAD
Sbjct:  322 DAGLKASDINEVILVGGSIRIPAVQELVKQVFGKEPNKSVNPDEVVAIGAAIQGGVLAGEVSDVLLLDVTPLSLGIETLGGVMTKLIERNTTIPTKKSQVFSTAAD 427
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_LEPBP (Chaperone protein dnaK OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=dnaK PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 5.407e-38
Identity = 75/106 (70.75%), Postives = 90/106 (84.91%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  ++DEV+LVGG  R+P VQ +V EIFGK P+K VNPDE VA+GAAIQGG+L GDV ++LLLDVTPLSLGIETLGG+ T+LI RNTTI T+KSQVFSTAAD
Sbjct:  322 DAGLSASEIDEVILVGGSIRIPAVQALVKEIFGKEPNKSVNPDEVVAVGAAIQGGVLAGDVTDVLLLDVTPLSLGIETLGGVMTKLIERNTTIPTRKSQVFSTAAD 427
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_LEPBL (Chaperone protein dnaK OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=dnaK PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 5.407e-38
Identity = 75/106 (70.75%), Postives = 90/106 (84.91%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   D++EV+LVGG  R+P VQE+V +IFGK P+K VNPDE VA+GAAIQGG+L G+V ++LLLDVTPLSLGIETLGG+ T+LI RNTTI TKKSQVFSTAAD
Sbjct:  322 DAGLKASDINEVILVGGSIRIPAVQELVKQIFGKEPNKSVNPDEVVAVGAAIQGGVLAGEVSDVLLLDVTPLSLGIETLGGVMTKLIERNTTIPTKKSQVFSTAAD 427
The following BLAST results are available for this feature:
BLAST of CX287063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_RICTY4.140e-3872.64Chaperone protein dnaK OS=Rickettsia typhi GN=dnaK... [more]
DNAK_RICFE4.140e-3872.64Chaperone protein dnaK OS=Rickettsia felis GN=dnaK... [more]
DNAK_METSS4.140e-3871.70Chaperone protein dnaK OS=Methylovorus sp. (strain... [more]
DNAK_FRATM4.140e-3872.64Chaperone protein dnaK OS=Francisella tularensis s... [more]
DNAK_BRECH4.140e-3869.81Chaperone protein dnaK OS=Brevibacillus choshinens... [more]
DNAK_NITOC5.407e-3870.75Chaperone protein dnaK OS=Nitrosococcus oceani (st... [more]
DNAK_LEPIN5.407e-3869.81Chaperone protein dnaK OS=Leptospira interrogans G... [more]
DNAK_LEPIC5.407e-3869.81Chaperone protein dnaK OS=Leptospira interrogans s... [more]
DNAK_LEPBP5.407e-3870.75Chaperone protein dnaK OS=Leptospira biflexa serov... [more]
DNAK_LEPBL5.407e-3870.75Chaperone protein dnaK OS=Leptospira borgpeterseni... [more]

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Properties
Property NameValue
Genbank descriptionC01004C06SK Veg1 Citrus clementina cDNA clone C01004C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287063 ID=CX287063; Name=CX287063; organism=Citrus clementina; type=EST; length=320bp
GATGCCAACATTACCACAAAGGATGTGGATGAGGTGCTTTTGGTTGGAGG
AATGACCCGTGTGCCAAAGGTGCAGGAAGTGGTCTCAGAAATCTTTGGTA
AGAGTCCAAGCAAGGGAGTAAATCCTGATGAGGCAGTTGCCCTTGGTGCT
GCTATTCAAGGTGGTATTCTTCGTGGCGACGTCAAAGAGTTGCTTCTCTT
GGATGTTACACCTCTGTCACTGGGTATTGAGACACTAGGTGGTATCTTTA
CCAGGTTGATCAATCGCAACACAACTATTTCAACAAAAAAGAGTCAGGTC
TTCTCAACAGCAGCTGATAA
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