CX287063

Overview
NameCX287063
Unique NameCX287063
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length320
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_LEPBJ (Chaperone protein dnaK OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=dnaK PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 5.407e-38
Identity = 75/106 (70.75%), Postives = 90/106 (84.91%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   D++EV+LVGG  R+P VQE+V +IFGK P+K VNPDE VA+GAAIQGG+L G+V ++LLLDVTPLSLGIETLGG+ T+LI RNTTI TKKSQVFSTAAD
Sbjct:  322 DAGLKASDINEVILVGGSIRIPAVQELVKQIFGKEPNKSVNPDEVVAVGAAIQGGVLAGEVSDVLLLDVTPLSLGIETLGGVMTKLIERNTTIPTKKSQVFSTAAD 427
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_LEPBA (Chaperone protein dnaK OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=dnaK PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 5.407e-38
Identity = 75/106 (70.75%), Postives = 90/106 (84.91%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  ++DEV+LVGG  R+P VQ +V EIFGK P+K VNPDE VA+GAAIQGG+L GDV ++LLLDVTPLSLGIETLGG+ T+LI RNTTI T+KSQVFSTAAD
Sbjct:  322 DAGLSASEIDEVILVGGSIRIPAVQALVKEIFGKEPNKSVNPDEVVAVGAAIQGGVLAGDVTDVLLLDVTPLSLGIETLGGVMTKLIERNTTIPTRKSQVFSTAAD 427
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_BACSK (Chaperone protein dnaK OS=Bacillus clausii (strain KSM-K16) GN=dnaK PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 5.407e-38
Identity = 73/106 (68.87%), Postives = 90/106 (84.91%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+D+V+LVGG TR+P VQE + ++ GK P KGVNPDE VALGAA+Q G+L GDVK+++LLDVTPLSLGIET+GG+FT+LI RNTTI T KSQVFSTAAD
Sbjct:  295 DAGLSASDIDKVVLVGGSTRIPAVQEAIKKLTGKDPHKGVNPDEVVALGAAVQAGVLTGDVKDVVLLDVTPLSLGIETMGGVFTKLIERNTTIPTSKSQVFSTAAD 400
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_ANOFW (Chaperone protein dnaK OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 7.061e-38
Identity = 72/106 (67.92%), Postives = 90/106 (84.91%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +T  D+D+V+LVGG TR+P VQE + +  GK P KGVNPDE VA+GAAIQGG++ GDVK+++LLDVTPLSLGIET+GG+FT+LI RNTTI T KSQ+F+TAAD
Sbjct:  296 DAGLTPADIDKVILVGGSTRIPAVQEAIKKEIGKEPHKGVNPDEVVAIGAAIQGGVIAGDVKDVVLLDVTPLSLGIETMGGVFTKLIERNTTIPTSKSQIFTTAAD 401
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_XANOR (Chaperone protein dnaK OS=Xanthomonas oryzae pv. oryzae GN=dnaK PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 9.222e-38
Identity = 73/106 (68.87%), Postives = 90/106 (84.91%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   D++EV+LVGG TR+PKVQ+ V++ FGK P K VNPDEAVA+GAAIQGG+L GDVK++LLLDVTPLSLGIET+GG+FT++I +NTTI TK SQ FSTA D
Sbjct:  327 DAGLRASDINEVILVGGQTRMPKVQQAVADFFGKEPRKDVNPDEAVAVGAAIQGGVLAGDVKDVLLLDVTPLSLGIETMGGVFTKIIEKNTTIPTKASQTFSTAED 432
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_XANOP (Chaperone protein dnaK OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=dnaK PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 9.222e-38
Identity = 73/106 (68.87%), Postives = 90/106 (84.91%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   D++EV+LVGG TR+PKVQ+ V++ FGK P K VNPDEAVA+GAAIQGG+L GDVK++LLLDVTPLSLGIET+GG+FT++I +NTTI TK SQ FSTA D
Sbjct:  327 DAGLRASDINEVILVGGQTRMPKVQQAVADFFGKEPRKDVNPDEAVAVGAAIQGGVLAGDVKDVLLLDVTPLSLGIETMGGVFTKIIEKNTTIPTKASQTFSTAED 432
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_XANOM (Chaperone protein dnaK OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=dnaK PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 9.222e-38
Identity = 73/106 (68.87%), Postives = 90/106 (84.91%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   D++EV+LVGG TR+PKVQ+ V++ FGK P K VNPDEAVA+GAAIQGG+L GDVK++LLLDVTPLSLGIET+GG+FT++I +NTTI TK SQ FSTA D
Sbjct:  327 DAGLRASDINEVILVGGQTRMPKVQQAVADFFGKEPRKDVNPDEAVAVGAAIQGGVLAGDVKDVLLLDVTPLSLGIETMGGVFTKIIEKNTTIPTKASQTFSTAED 432
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_XANCP (Chaperone protein dnaK OS=Xanthomonas campestris pv. campestris GN=dnaK PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 9.222e-38
Identity = 73/106 (68.87%), Postives = 90/106 (84.91%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   D++EV+LVGG TR+PKVQ+ V++ FGK P K VNPDEAVA+GAAIQGG+L GDVK++LLLDVTPLSLGIET+GG+FT++I +NTTI TK SQ FSTA D
Sbjct:  327 DAGLRASDINEVILVGGQTRMPKVQQAVADFFGKEPRKDVNPDEAVAVGAAIQGGVLAGDVKDVLLLDVTPLSLGIETMGGVFTKIIEKNTTIPTKASQTFSTAED 432
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_XANCB (Chaperone protein dnaK OS=Xanthomonas campestris pv. campestris (strain B100) GN=dnaK PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 9.222e-38
Identity = 73/106 (68.87%), Postives = 90/106 (84.91%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   D++EV+LVGG TR+PKVQ+ V++ FGK P K VNPDEAVA+GAAIQGG+L GDVK++LLLDVTPLSLGIET+GG+FT++I +NTTI TK SQ FSTA D
Sbjct:  327 DAGLRASDINEVILVGGQTRMPKVQQAVADFFGKEPRKDVNPDEAVAVGAAIQGGVLAGDVKDVLLLDVTPLSLGIETMGGVFTKIIEKNTTIPTKASQTFSTAED 432
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_XANC8 (Chaperone protein dnaK OS=Xanthomonas campestris pv. campestris (strain 8004) GN=dnaK PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 9.222e-38
Identity = 73/106 (68.87%), Postives = 90/106 (84.91%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   D++EV+LVGG TR+PKVQ+ V++ FGK P K VNPDEAVA+GAAIQGG+L GDVK++LLLDVTPLSLGIET+GG+FT++I +NTTI TK SQ FSTA D
Sbjct:  327 DAGLRASDINEVILVGGQTRMPKVQQAVADFFGKEPRKDVNPDEAVAVGAAIQGGVLAGDVKDVLLLDVTPLSLGIETMGGVFTKIIEKNTTIPTKASQTFSTAED 432
The following BLAST results are available for this feature:
BLAST of CX287063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_LEPBJ5.407e-3870.75Chaperone protein dnaK OS=Leptospira borgpeterseni... [more]
DNAK_LEPBA5.407e-3870.75Chaperone protein dnaK OS=Leptospira biflexa serov... [more]
DNAK_BACSK5.407e-3868.87Chaperone protein dnaK OS=Bacillus clausii (strain... [more]
DNAK_ANOFW7.061e-3867.92Chaperone protein dnaK OS=Anoxybacillus flavitherm... [more]
DNAK_XANOR9.222e-3868.87Chaperone protein dnaK OS=Xanthomonas oryzae pv. o... [more]
DNAK_XANOP9.222e-3868.87Chaperone protein dnaK OS=Xanthomonas oryzae pv. o... [more]
DNAK_XANOM9.222e-3868.87Chaperone protein dnaK OS=Xanthomonas oryzae pv. o... [more]
DNAK_XANCP9.222e-3868.87Chaperone protein dnaK OS=Xanthomonas campestris p... [more]
DNAK_XANCB9.222e-3868.87Chaperone protein dnaK OS=Xanthomonas campestris p... [more]
DNAK_XANC89.222e-3868.87Chaperone protein dnaK OS=Xanthomonas campestris p... [more]

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Properties
Property NameValue
Genbank descriptionC01004C06SK Veg1 Citrus clementina cDNA clone C01004C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287063 ID=CX287063; Name=CX287063; organism=Citrus clementina; type=EST; length=320bp
GATGCCAACATTACCACAAAGGATGTGGATGAGGTGCTTTTGGTTGGAGG
AATGACCCGTGTGCCAAAGGTGCAGGAAGTGGTCTCAGAAATCTTTGGTA
AGAGTCCAAGCAAGGGAGTAAATCCTGATGAGGCAGTTGCCCTTGGTGCT
GCTATTCAAGGTGGTATTCTTCGTGGCGACGTCAAAGAGTTGCTTCTCTT
GGATGTTACACCTCTGTCACTGGGTATTGAGACACTAGGTGGTATCTTTA
CCAGGTTGATCAATCGCAACACAACTATTTCAACAAAAAAGAGTCAGGTC
TTCTCAACAGCAGCTGATAA
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