CX287063

Overview
NameCX287063
Unique NameCX287063
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length320
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_XANC5 (Chaperone protein dnaK OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=dnaK PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 9.222e-38
Identity = 73/106 (68.87%), Postives = 90/106 (84.91%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   D++EV+LVGG TR+PKVQ+ V++ FGK P K VNPDEAVA+GAAIQGG+L GDVK++LLLDVTPLSLGIET+GG+FT++I +NTTI TK SQ FSTA D
Sbjct:  327 DAGLRASDINEVILVGGQTRMPKVQQAVADFFGKEPRKDVNPDEAVAVGAAIQGGVLAGDVKDVLLLDVTPLSLGIETMGGVFTKIIEKNTTIPTKASQTFSTAED 432
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_XANAC (Chaperone protein dnaK OS=Xanthomonas axonopodis pv. citri GN=dnaK PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 9.222e-38
Identity = 73/106 (68.87%), Postives = 90/106 (84.91%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   D++EV+LVGG TR+PKVQ+ V++ FGK P K VNPDEAVA+GAAIQGG+L GDVK++LLLDVTPLSLGIET+GG+FT++I +NTTI TK SQ FSTA D
Sbjct:  327 DAGLRASDINEVILVGGQTRMPKVQQAVADFFGKEPRKDVNPDEAVAVGAAIQGGVLAGDVKDVLLLDVTPLSLGIETMGGVFTKIIEKNTTIPTKASQTFSTAED 432
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_THEPX (Chaperone protein dnaK OS=Thermoanaerobacter sp. (strain X514) GN=dnaK PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 9.222e-38
Identity = 73/106 (68.87%), Postives = 90/106 (84.91%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   D+D+VLL+GG TRVP VQE V +I GK P KG+NPDEAVA+GAAIQ  +L G+VK++LLLDVTPLSLGIETLGG+FT++I RNTTI T+KSQ+F+TAAD
Sbjct:  297 DAGLKPSDIDKVLLIGGSTRVPLVQETVKKIMGKEPHKGINPDEAVAIGAAIQAAVLSGEVKDILLLDVTPLSLGIETLGGVFTKIIERNTTIPTRKSQIFTTAAD 402
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_LACF3 (Chaperone protein dnaK OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=dnaK PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 9.222e-38
Identity = 74/106 (69.81%), Postives = 91/106 (85.85%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+DEV+L GG TR+P VQE+V  + GK P+  +NPDEAVALGAAIQGG+L GDVK+++LLDVTPLSLGIET+GG+FT+LI+RNTTI T KSQVFSTAAD
Sbjct:  299 DAELSFSDIDEVILNGGSTRIPAVQEMVKSLTGKEPNHSINPDEAVALGAAIQGGVLTGDVKDVVLLDVTPLSLGIETMGGVFTKLIDRNTTIPTSKSQVFSTAAD 404
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_GEOTN (Chaperone protein dnaK OS=Geobacillus thermodenitrificans (strain NG80-2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 9.222e-38
Identity = 72/106 (67.92%), Postives = 90/106 (84.91%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +T+ D+D+V+LVGG TR+P VQE +    GK P KGVNPDE VA+GAAIQGG++ G+VK+++LLDVTPLSLGIET+GG+FT+LI RNTTI T KSQVF+TAAD
Sbjct:  295 DAGLTSADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGGVIAGEVKDIVLLDVTPLSLGIETMGGVFTKLIERNTTIPTSKSQVFTTAAD 400
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_FUSNN (Chaperone protein dnaK OS=Fusobacterium nucleatum subsp. nucleatum GN=dnaK PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 9.222e-38
Identity = 73/106 (68.87%), Postives = 88/106 (83.02%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA++    +DE+LLVGG TR+P VQE V   FGK P+KG+NPDE VA GAAIQGG+L GDVK++LLLDVTPLSLGIETLGG+FT++I +NTTI  KKSQV+STA D
Sbjct:  297 DASLEANQIDEILLVGGSTRIPAVQEWVENFFGKKPNKGINPDEVVAAGAAIQGGVLMGDVKDVLLLDVTPLSLGIETLGGVFTKMIEKNTTIPVKKSQVYSTAVD 402
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_BREBN (Chaperone protein dnaK OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=dnaK PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 9.222e-38
Identity = 74/106 (69.81%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +T  ++D V+LVGG TR+P VQE + +  GK P KGVNPDE VALGAA+Q G+L GDVK+++LLDVTPLSLGIETLGG+FT+LI+RNTTI T KSQVFSTAAD
Sbjct:  296 DAGLTPSELDRVILVGGSTRIPAVQEAIKKFTGKEPHKGVNPDEVVALGAAVQAGVLTGDVKDVVLLDVTPLSLGIETLGGVFTKLIDRNTTIPTSKSQVFSTAAD 401
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_WOLWR (Chaperone protein dnaK OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=dnaK PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.204e-37
Identity = 76/106 (71.70%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++   + EV+LVGGMTR+PKV E V E FGK P +GVNPDE VA+GAAIQ GI++GDV+++LLLDVTPLSLGIETLGG+FT LI RNTTI TKKSQVFSTA D
Sbjct:  320 DAGLSASQIGEVVLVGGMTRMPKVIEKVKEFFGKDPHRGVNPDEVVAIGAAIQAGIIQGDVRDVLLLDVTPLSLGIETLGGVFTPLIERNTTIPTKKSQVFSTAED 425
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_WOLPP (Chaperone protein dnaK OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=dnaK PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.204e-37
Identity = 76/106 (71.70%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++   + EV+LVGGMTR+PKV E V E FGK P +GVNPDE VA+GAAIQ GI++GDV+++LLLDVTPLSLGIETLGG+FT LI RNTTI TKKSQVFSTA D
Sbjct:  320 DAGLSASQIGEVVLVGGMTRMPKVIEKVKEFFGKDPHRGVNPDEVVAIGAAIQAGIIQGDVRDVLLLDVTPLSLGIETLGGVFTPLIERNTTIPTKKSQVFSTAED 425
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_WOLPM (Chaperone protein dnaK OS=Wolbachia pipientis wMel GN=dnaK PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.204e-37
Identity = 76/106 (71.70%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++   + EV+LVGGMTR+PKV E V E FGK P +GVNPDE VA+GAAIQ GI++GDV+++LLLDVTPLSLGIETLGG+FT LI RNTTI TKKSQVFSTA D
Sbjct:  320 DAGLSASQIGEVVLVGGMTRMPKVIEKVKEFFGKDPHRGVNPDEVVAIGAAIQAGIIQGDVRDVLLLDVTPLSLGIETLGGVFTPLIERNTTIPTKKSQVFSTAED 425
The following BLAST results are available for this feature:
BLAST of CX287063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_XANC59.222e-3868.87Chaperone protein dnaK OS=Xanthomonas campestris p... [more]
DNAK_XANAC9.222e-3868.87Chaperone protein dnaK OS=Xanthomonas axonopodis p... [more]
DNAK_THEPX9.222e-3868.87Chaperone protein dnaK OS=Thermoanaerobacter sp. (... [more]
DNAK_LACF39.222e-3869.81Chaperone protein dnaK OS=Lactobacillus fermentum ... [more]
DNAK_GEOTN9.222e-3867.92Chaperone protein dnaK OS=Geobacillus thermodenitr... [more]
DNAK_FUSNN9.222e-3868.87Chaperone protein dnaK OS=Fusobacterium nucleatum ... [more]
DNAK_BREBN9.222e-3869.81Chaperone protein dnaK OS=Brevibacillus brevis (st... [more]
DNAK_WOLWR1.204e-3771.70Chaperone protein dnaK OS=Wolbachia sp. subsp. Dro... [more]
DNAK_WOLPP1.204e-3771.70Chaperone protein dnaK OS=Wolbachia pipientis subs... [more]
DNAK_WOLPM1.204e-3771.70Chaperone protein dnaK OS=Wolbachia pipientis wMel... [more]

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Properties
Property NameValue
Genbank descriptionC01004C06SK Veg1 Citrus clementina cDNA clone C01004C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287063 ID=CX287063; Name=CX287063; organism=Citrus clementina; type=EST; length=320bp
GATGCCAACATTACCACAAAGGATGTGGATGAGGTGCTTTTGGTTGGAGG
AATGACCCGTGTGCCAAAGGTGCAGGAAGTGGTCTCAGAAATCTTTGGTA
AGAGTCCAAGCAAGGGAGTAAATCCTGATGAGGCAGTTGCCCTTGGTGCT
GCTATTCAAGGTGGTATTCTTCGTGGCGACGTCAAAGAGTTGCTTCTCTT
GGATGTTACACCTCTGTCACTGGGTATTGAGACACTAGGTGGTATCTTTA
CCAGGTTGATCAATCGCAACACAACTATTTCAACAAAAAAGAGTCAGGTC
TTCTCAACAGCAGCTGATAA
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