CX287063

Overview
NameCX287063
Unique NameCX287063
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length320
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_SYMTH (Chaperone protein dnaK OS=Symbiobacterium thermophilum GN=dnaK PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.204e-37
Identity = 73/106 (68.87%), Postives = 89/106 (83.96%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   ++D+VLLVGG TR+P VQE V   FGK P KG+NPDE VA+GAAIQ  +++GDVK++LLLDVTPLSLGIETLGG+FT+LI RNTTI T+KSQ+FSTAAD
Sbjct:  297 DAGLEPGEIDKVLLVGGSTRIPAVQEAVRRFFGKEPYKGINPDEVVAMGAAIQAAVIKGDVKDVLLLDVTPLSLGIETLGGVFTKLIERNTTIPTRKSQIFSTAAD 402          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_DESOH (Chaperone protein dnaK OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.204e-37
Identity = 74/106 (69.81%), Postives = 91/106 (85.85%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            D+  +   +DEV+LVGGMTR+P VQ+ V +IFGK+P+K VNPDE VA+GAAIQ G+L+GDV ++LLLDVTPLSLGIETLGG+ T+LI +NTTI TKKSQVFSTAAD
Sbjct:  321 DSGFSASQIDEVILVGGMTRMPAVQDRVKKIFGKAPNKSVNPDEVVAIGAAIQAGVLQGDVNDVLLLDVTPLSLGIETLGGVMTKLIEKNTTIPTKKSQVFSTAAD 426          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_BACP2 (Chaperone protein dnaK OS=Bacillus pumilus (strain SAFR-032) GN=dnaK PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.204e-37
Identity = 73/106 (68.87%), Postives = 90/106 (84.91%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  ++D+V+LVGG TR+P VQE + +  GK P KGVNPDE VALGAAIQGG++ GDVK+++LLDVTPLSLGIET+GG+FT+LI RNTTI T KSQVFSTAAD
Sbjct:  296 DAGLSASEIDKVILVGGSTRIPAVQEAIKKETGKEPHKGVNPDEVVALGAAIQGGVITGDVKDVVLLDVTPLSLGIETMGGVFTKLIERNTTIPTSKSQVFSTAAD 401          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_RICBR (Chaperone protein dnaK OS=Rickettsia bellii (strain RML369-C) GN=dnaK PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 1.573e-37
Identity = 76/106 (71.70%), Postives = 90/106 (84.91%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   D+ EV+LVGGMTR+PKVQE V + FG++  KGVNPDE VALGAAIQGG+L  +V ++LLLDVTPLSLGIETLGG+FTRLI+RNTTI +KKSQVFSTA D
Sbjct:  320 DAGLKASDIQEVVLVGGMTRMPKVQEAVEKFFGRALHKGVNPDEVVALGAAIQGGVLNKEVTDILLLDVTPLSLGIETLGGVFTRLIDRNTTIPSKKSQVFSTADD 425          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_MYXXD (Chaperone protein dnaK OS=Myxococcus xanthus (strain DK 1622) GN=dnaK PE=2 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 1.573e-37
Identity = 71/106 (66.98%), Postives = 92/106 (86.79%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA I  + +++VLLVGGMTR+P+VQ+ V E FG+ P KG+NPDE VA+GAAIQGG+L+G+VK++LLLDVTPLSLG+ET GG+FT++I++NTTI  KKSQVFSTA D
Sbjct:  325 DAGIPAQQINQVLLVGGMTRMPRVQQKVKEFFGREPHKGINPDEVVAVGAAIQGGVLKGEVKDVLLLDVTPLSLGVETAGGVFTKIIDKNTTIPCKKSQVFSTAVD 430          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_DESHD (Chaperone protein dnaK OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=dnaK PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 1.573e-37
Identity = 72/106 (67.92%), Postives = 92/106 (86.79%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  +V++V+LVGG TR+P VQE + ++ GK P KGVNPDE VALGAAIQGG+L G+VK+++L+DVTPLSLGIETLGG+FTR+I+RNTT+ T KSQVFSTAAD
Sbjct:  297 DAKLSWNEVNQVILVGGSTRIPAVQEAIKKLSGKEPHKGVNPDEVVALGAAIQGGVLAGEVKDIILVDVTPLSLGIETLGGVFTRIIDRNTTVPTTKSQVFSTAAD 402          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_CLOK5 (Chaperone protein dnaK OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=dnaK PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 1.573e-37
Identity = 76/106 (71.70%), Postives = 88/106 (83.02%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +T  D+++V+LVGG TR+P VQE V    GK PSKGVNPDE VA+GAAIQ G+L GDVK++LLLDVTPL+LGIETLGG+ T LI RNTTI TKKSQVFSTAAD
Sbjct:  298 DAGLTINDINKVILVGGSTRIPAVQEAVKSFTGKEPSKGVNPDECVAMGAAIQAGVLTGDVKDVLLLDVTPLTLGIETLGGVATPLIERNTTIPTKKSQVFSTAAD 403          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_CLOK1 (Chaperone protein dnaK OS=Clostridium kluyveri (strain NBRC 12016) GN=dnaK PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 1.573e-37
Identity = 76/106 (71.70%), Postives = 88/106 (83.02%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +T  D+++V+LVGG TR+P VQE V    GK PSKGVNPDE VA+GAAIQ G+L GDVK++LLLDVTPL+LGIETLGG+ T LI RNTTI TKKSQVFSTAAD
Sbjct:  298 DAGLTINDINKVILVGGSTRIPAVQEAVKSFTGKEPSKGVNPDECVAMGAAIQAGVLTGDVKDVLLLDVTPLTLGIETLGGVATPLIERNTTIPTKKSQVFSTAAD 403          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_CLOD6 (Chaperone protein dnaK OS=Clostridium difficile (strain 630) GN=dnaK PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 1.573e-37
Identity = 73/106 (68.87%), Postives = 88/106 (83.02%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++T D+D+VLLVGG TR+P VQE V +  GK P KG+NPDE VA GA+IQ G+L GDVK+LLLLDVTPLSLGIET+G + T++I RNTTI TKKSQ+FSTAAD
Sbjct:  298 DAGLSTGDIDDVLLVGGSTRIPAVQEAVKKFIGKEPHKGINPDECVAAGASIQAGVLAGDVKDLLLLDVTPLSLGIETMGNVMTKIIERNTTIPTKKSQIFSTAAD 403          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_THEP3 (Chaperone protein dnaK OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=dnaK PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 2.055e-37
Identity = 72/106 (67.92%), Postives = 89/106 (83.96%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   D+D+V+L+GG TRVP VQE V  I GK P KG+NPDEAVA+GAAIQ  +L G+VK++LLLDVTPLSLGIETLGG+FT++I RNTTI T+KSQ+F+TAAD
Sbjct:  297 DAGLKPSDIDKVILIGGSTRVPLVQETVKRIMGKEPHKGINPDEAVAIGAAIQAAVLAGEVKDILLLDVTPLSLGIETLGGVFTKIIERNTTIPTRKSQIFTTAAD 402          
The following BLAST results are available for this feature:
BLAST of CX287063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_SYMTH1.204e-3768.87Chaperone protein dnaK OS=Symbiobacterium thermoph... [more]
DNAK_DESOH1.204e-3769.81Chaperone protein dnaK OS=Desulfococcus oleovorans... [more]
DNAK_BACP21.204e-3768.87Chaperone protein dnaK OS=Bacillus pumilus (strain... [more]
DNAK_RICBR1.573e-3771.70Chaperone protein dnaK OS=Rickettsia bellii (strai... [more]
DNAK_MYXXD1.573e-3766.98Chaperone protein dnaK OS=Myxococcus xanthus (stra... [more]
DNAK_DESHD1.573e-3767.92Chaperone protein dnaK OS=Desulfitobacterium hafni... [more]
DNAK_CLOK51.573e-3771.70Chaperone protein dnaK OS=Clostridium kluyveri (st... [more]
DNAK_CLOK11.573e-3771.70Chaperone protein dnaK OS=Clostridium kluyveri (st... [more]
DNAK_CLOD61.573e-3768.87Chaperone protein dnaK OS=Clostridium difficile (s... [more]
DNAK_THEP32.055e-3767.92Chaperone protein dnaK OS=Thermoanaerobacter pseud... [more]

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Properties
Property NameValue
Genbank descriptionC01004C06SK Veg1 Citrus clementina cDNA clone C01004C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287063 ID=CX287063; Name=CX287063; organism=Citrus clementina; type=EST; length=320bp
GATGCCAACATTACCACAAAGGATGTGGATGAGGTGCTTTTGGTTGGAGG
AATGACCCGTGTGCCAAAGGTGCAGGAAGTGGTCTCAGAAATCTTTGGTA
AGAGTCCAAGCAAGGGAGTAAATCCTGATGAGGCAGTTGCCCTTGGTGCT
GCTATTCAAGGTGGTATTCTTCGTGGCGACGTCAAAGAGTTGCTTCTCTT
GGATGTTACACCTCTGTCACTGGGTATTGAGACACTAGGTGGTATCTTTA
CCAGGTTGATCAATCGCAACACAACTATTTCAACAAAAAAGAGTCAGGTC
TTCTCAACAGCAGCTGATAA
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