CX287063

Overview
NameCX287063
Unique NameCX287063
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length320
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_LEUCK (Chaperone protein dnaK OS=Leuconostoc citreum (strain KM20) GN=dnaK PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 3.505e-37
Identity = 72/106 (67.92%), Postives = 91/106 (85.85%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+DEV+L GG TR+P VQE V ++ GK P+  +NPDEAVALGAA+QGG++ GDVK+++LLDVTPLSLGIET+GG+FT+LI+RNTTI T KSQVFSTAAD
Sbjct:  297 DAGLSFSDIDEVILNGGSTRIPAVQESVKKLTGKEPNHSINPDEAVALGAAVQGGVITGDVKDVVLLDVTPLSLGIETMGGVFTKLIDRNTTIPTSKSQVFSTAAD 402          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_DESRM (Chaperone protein dnaK OS=Desulfotomaculum reducens (strain MI-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 3.505e-37
Identity = 72/106 (67.92%), Postives = 90/106 (84.91%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            D+ + T ++++VL+VGG TR+P VQE V +  GK P KG+NPDE VALGAAIQ G+L G+VK++LLLDVTPLSLGIETLGG+FT+LI+RNTTI T KSQ+FSTAAD
Sbjct:  297 DSGLETNEINKVLMVGGSTRIPAVQEAVRKFLGKEPHKGINPDECVALGAAIQAGVLAGEVKDVLLLDVTPLSLGIETLGGVFTKLIDRNTTIPTSKSQIFSTAAD 402          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_CHLCH (Chaperone protein dnaK OS=Chlorobium chlorochromatii (strain CaD3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 3.505e-37
Identity = 72/106 (67.92%), Postives = 90/106 (84.91%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            +A I  +++DEV+LVGG TR+PK+Q +V E FGK P+K VNPDE VA+GAAIQGG+L+GDV ++LLLDVTPLSLGIETLGG+ T+LI  NTTI TKK +VFSTA+D
Sbjct:  319 NAKIEMREIDEVVLVGGSTRIPKIQALVKEFFGKEPNKSVNPDEVVAIGAAIQGGVLKGDVTDVLLLDVTPLSLGIETLGGVMTKLIEANTTIPTKKQEVFSTASD 424          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_BACCN (Chaperone protein dnaK OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=dnaK PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 3.505e-37
Identity = 74/106 (69.81%), Postives = 88/106 (83.02%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+D+V+LVGG TR+P VQE +    GK P KGVNPDE VALGAA+QGG+L GDV+ +LLLDVTPLSLGIET+GG+FT+LI RNTTI T KSQVFSTAAD
Sbjct:  296 DAGLSASDLDKVILVGGSTRIPAVQEAIKRETGKEPYKGVNPDEVVALGAAVQGGVLTGDVEGVLLLDVTPLSLGIETMGGVFTKLIERNTTIPTSKSQVFSTAAD 401          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_MESFL (Chaperone protein dnaK OS=Mesoplasma florum GN=dnaK PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 4.577e-37
Identity = 70/105 (66.67%), Postives = 90/105 (85.71%), Query Frame = 1
Query:    4 ANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            A ++  D+DEVLLVGG TR+P VQ++V E+ GK P++ +NPDE VA+GAAIQGG+L GDV ++LLLDVTPLSLGIET+GG+ T+LI+RNTTI T+KSQ+FSTA D
Sbjct:  299 AKLSASDIDEVLLVGGSTRIPAVQKIVKELLGKEPNRSINPDEVVAMGAAIQGGVLAGDVTDVLLLDVTPLSLGIETMGGVMTKLIDRNTTIPTEKSQIFSTAVD 403          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_MARMS (Chaperone protein dnaK OS=Marinomonas sp. (strain MWYL1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 4.577e-37
Identity = 74/106 (69.81%), Postives = 88/106 (83.02%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA++T  D+DEV+LVGG TR+P VQ  V+E FGK P K VNPDEAVA+GA+IQG +L GDVK++LLLDVTPLSLGIET+GG+ T LI +NTTI TKKSQ FSTA D
Sbjct:  326 DADLTASDIDEVILVGGQTRMPLVQAKVTEFFGKEPRKDVNPDEAVAIGASIQGAVLSGDVKDVLLLDVTPLSLGIETMGGVMTTLIEKNTTIPTKKSQTFSTAED 431          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_LACH4 (Chaperone protein dnaK OS=Lactobacillus helveticus (strain DPC 4571) GN=dnaK PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 4.577e-37
Identity = 72/106 (67.92%), Postives = 89/106 (83.96%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +T  D+D+V+L GG TR+P VQ+ V E  GK P   +NPDEAVALGAAIQGG++ GDVK+++LLDVTPLSLGIET+GG+FT+LI+RNTTI T KSQ+FSTAAD
Sbjct:  296 DAGLTVNDIDKVILNGGSTRIPAVQKAVKEWAGKEPDHSINPDEAVALGAAIQGGVISGDVKDIVLLDVTPLSLGIETMGGVFTKLIDRNTTIPTSKSQIFSTAAD 401          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_LACAC (Chaperone protein dnaK OS=Lactobacillus acidophilus GN=dnaK PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 4.577e-37
Identity = 72/106 (67.92%), Postives = 89/106 (83.96%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +T  D+D+V+L GG TR+P VQ+ V E  GK P   +NPDEAVALGAAIQGG++ GDVK+++LLDVTPLSLGIET+GG+FT+LI+RNTTI T KSQ+FSTAAD
Sbjct:  297 DAGLTVNDIDKVILNGGSTRIPAVQKAVKEWAGKEPDHSINPDEAVALGAAIQGGVISGDVKDIVLLDVTPLSLGIETMGGVFTKLIDRNTTIPTSKSQIFSTAAD 402          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_SHISS (Chaperone protein dnaK OS=Shigella sonnei (strain Ss046) GN=dnaK PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 5.978e-37
Identity = 73/106 (68.87%), Postives = 89/106 (83.96%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+D+V+LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAA+QGG+L GDVK++LLLDVTPLSLGIET+GG+ T LI +NTTI TK SQVFSTA D
Sbjct:  326 DAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAED 431          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_SHIFL (Chaperone protein dnaK OS=Shigella flexneri GN=dnaK PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 5.978e-37
Identity = 73/106 (68.87%), Postives = 89/106 (83.96%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+D+V+LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAA+QGG+L GDVK++LLLDVTPLSLGIET+GG+ T LI +NTTI TK SQVFSTA D
Sbjct:  326 DAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAED 431          
The following BLAST results are available for this feature:
BLAST of CX287063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_LEUCK3.505e-3767.92Chaperone protein dnaK OS=Leuconostoc citreum (str... [more]
DNAK_DESRM3.505e-3767.92Chaperone protein dnaK OS=Desulfotomaculum reducen... [more]
DNAK_CHLCH3.505e-3767.92Chaperone protein dnaK OS=Chlorobium chlorochromat... [more]
DNAK_BACCN3.505e-3769.81Chaperone protein dnaK OS=Bacillus cereus subsp. c... [more]
DNAK_MESFL4.577e-3766.67Chaperone protein dnaK OS=Mesoplasma florum GN=dna... [more]
DNAK_MARMS4.577e-3769.81Chaperone protein dnaK OS=Marinomonas sp. (strain ... [more]
DNAK_LACH44.577e-3767.92Chaperone protein dnaK OS=Lactobacillus helveticus... [more]
DNAK_LACAC4.577e-3767.92Chaperone protein dnaK OS=Lactobacillus acidophilu... [more]
DNAK_SHISS5.978e-3768.87Chaperone protein dnaK OS=Shigella sonnei (strain ... [more]
DNAK_SHIFL5.978e-3768.87Chaperone protein dnaK OS=Shigella flexneri GN=dna... [more]

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Properties
Property NameValue
Genbank descriptionC01004C06SK Veg1 Citrus clementina cDNA clone C01004C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287063 ID=CX287063; Name=CX287063; organism=Citrus clementina; type=EST; length=320bp
GATGCCAACATTACCACAAAGGATGTGGATGAGGTGCTTTTGGTTGGAGG
AATGACCCGTGTGCCAAAGGTGCAGGAAGTGGTCTCAGAAATCTTTGGTA
AGAGTCCAAGCAAGGGAGTAAATCCTGATGAGGCAGTTGCCCTTGGTGCT
GCTATTCAAGGTGGTATTCTTCGTGGCGACGTCAAAGAGTTGCTTCTCTT
GGATGTTACACCTCTGTCACTGGGTATTGAGACACTAGGTGGTATCTTTA
CCAGGTTGATCAATCGCAACACAACTATTTCAACAAAAAAGAGTCAGGTC
TTCTCAACAGCAGCTGATAA
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