CX287063

Overview
NameCX287063
Unique NameCX287063
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length320
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_SHIF8 (Chaperone protein dnaK OS=Shigella flexneri serotype 5b (strain 8401) GN=dnaK PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 5.978e-37
Identity = 73/106 (68.87%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+D+V+LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAA+QGG+L GDVK++LLLDVTPLSLGIET+GG+ T LI +NTTI TK SQVFSTA D
Sbjct:  326 DAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAED 431
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_SHIDS (Chaperone protein dnaK OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=dnaK PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 5.978e-37
Identity = 73/106 (68.87%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+D+V+LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAA+QGG+L GDVK++LLLDVTPLSLGIET+GG+ T LI +NTTI TK SQVFSTA D
Sbjct:  326 DAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAED 431
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_SHIBS (Chaperone protein dnaK OS=Shigella boydii serotype 4 (strain Sb227) GN=dnaK PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 5.978e-37
Identity = 73/106 (68.87%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+D+V+LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAA+QGG+L GDVK++LLLDVTPLSLGIET+GG+ T LI +NTTI TK SQVFSTA D
Sbjct:  326 DAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAED 431
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_PARL1 (Chaperone protein dnaK OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=dnaK PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 5.978e-37
Identity = 71/106 (66.98%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +T   ++E++LVGG +R+PK++E V + FGK P+  VNPDE VA+GAAIQ G+L+GDVK++LLLDVTPLSLGIETLGG+FTRLI RNTTI TKK+Q FSTA D
Sbjct:  321 DAGVTAGQINEIVLVGGQSRMPKIREAVKQFFGKEPNMSVNPDEVVAMGAAIQAGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIERNTTIPTKKAQTFSTAED 426
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_MEGEL (Chaperone protein dnaK (Fragment) OS=Megasphaera elsdenii GN=dnaK PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 5.978e-37
Identity = 71/106 (66.98%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            D+  T  ++D+++LVGG +R+P VQE +  I GK PSKGVNPDE VA+GAAIQ G+L GDVK++LLLDVTPLSLGIETLGG+FT++I+RNTTI T +SQVFSTA D
Sbjct:  297 DSGFTIDEIDKIILVGGSSRIPAVQEAIKSILGKEPSKGVNPDECVAIGAAIQAGVLVGDVKDVLLLDVTPLSLGIETLGGVFTKIIDRNTTIPTSRSQVFSTAVD 402
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_LEUMM (Chaperone protein dnaK OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=dnaK PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 5.978e-37
Identity = 72/106 (67.92%), Postives = 90/106 (84.91%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+DEV+L GG TR+P VQE V ++ GK P+  +NPDEAVALGAA+QGG++ GDVK+++LLDVTPLSLGIET+GG+FT+LI RNTTI T KSQVFSTAAD
Sbjct:  297 DAGLSFSDIDEVILNGGSTRIPAVQESVKKMTGKEPNHSINPDEAVALGAAVQGGVITGDVKDVVLLDVTPLSLGIETMGGVFTKLIERNTTIPTSKSQVFSTAAD 402
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_EDWI9 (Chaperone protein dnaK OS=Edwardsiella ictaluri (strain 93-146) GN=dnaK PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 5.978e-37
Identity = 72/106 (67.92%), Postives = 90/106 (84.91%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+D+V+LVGG TR+P VQ+ V++ FGK P K VNPDEAVA+GAA+QGG+L GDVK++LLLDVTPLSLGIET+GG+ T LI++NTTI TK SQVFSTA D
Sbjct:  326 DAGLSVSDIDDVILVGGQTRMPMVQKQVADFFGKEPRKDVNPDEAVAIGAAVQGGVLAGDVKDVLLLDVTPLSLGIETMGGVMTALISKNTTIPTKHSQVFSTAED 431
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_ECOUT (Chaperone protein dnaK OS=Escherichia coli (strain UTI89 / UPEC) GN=dnaK PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 5.978e-37
Identity = 73/106 (68.87%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+D+V+LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAA+QGG+L GDVK++LLLDVTPLSLGIET+GG+ T LI +NTTI TK SQVFSTA D
Sbjct:  326 DAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAED 431
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_ECOLI (Chaperone protein dnaK OS=Escherichia coli (strain K12) GN=dnaK PE=1 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 5.978e-37
Identity = 73/106 (68.87%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+D+V+LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAA+QGG+L GDVK++LLLDVTPLSLGIET+GG+ T LI +NTTI TK SQVFSTA D
Sbjct:  326 DAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAED 431
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_ECOLC (Chaperone protein dnaK OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=dnaK PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 5.978e-37
Identity = 73/106 (68.87%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+D+V+LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAA+QGG+L GDVK++LLLDVTPLSLGIET+GG+ T LI +NTTI TK SQVFSTA D
Sbjct:  326 DAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAED 431
The following BLAST results are available for this feature:
BLAST of CX287063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_SHIF85.978e-3768.87Chaperone protein dnaK OS=Shigella flexneri seroty... [more]
DNAK_SHIDS5.978e-3768.87Chaperone protein dnaK OS=Shigella dysenteriae ser... [more]
DNAK_SHIBS5.978e-3768.87Chaperone protein dnaK OS=Shigella boydii serotype... [more]
DNAK_PARL15.978e-3766.98Chaperone protein dnaK OS=Parvibaculum lavamentivo... [more]
DNAK_MEGEL5.978e-3766.98Chaperone protein dnaK (Fragment) OS=Megasphaera e... [more]
DNAK_LEUMM5.978e-3767.92Chaperone protein dnaK OS=Leuconostoc mesenteroide... [more]
DNAK_EDWI95.978e-3767.92Chaperone protein dnaK OS=Edwardsiella ictaluri (s... [more]
DNAK_ECOUT5.978e-3768.87Chaperone protein dnaK OS=Escherichia coli (strain... [more]
DNAK_ECOLI5.978e-3768.87Chaperone protein dnaK OS=Escherichia coli (strain... [more]
DNAK_ECOLC5.978e-3768.87Chaperone protein dnaK OS=Escherichia coli (strain... [more]

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Properties
Property NameValue
Genbank descriptionC01004C06SK Veg1 Citrus clementina cDNA clone C01004C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287063 ID=CX287063; Name=CX287063; organism=Citrus clementina; type=EST; length=320bp
GATGCCAACATTACCACAAAGGATGTGGATGAGGTGCTTTTGGTTGGAGG
AATGACCCGTGTGCCAAAGGTGCAGGAAGTGGTCTCAGAAATCTTTGGTA
AGAGTCCAAGCAAGGGAGTAAATCCTGATGAGGCAGTTGCCCTTGGTGCT
GCTATTCAAGGTGGTATTCTTCGTGGCGACGTCAAAGAGTTGCTTCTCTT
GGATGTTACACCTCTGTCACTGGGTATTGAGACACTAGGTGGTATCTTTA
CCAGGTTGATCAATCGCAACACAACTATTTCAACAAAAAAGAGTCAGGTC
TTCTCAACAGCAGCTGATAA
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