CX287063

Overview
NameCX287063
Unique NameCX287063
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length320
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_BDEBA (Chaperone protein dnaK OS=Bdellovibrio bacteriovorus GN=dnaK PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.739e-36
Identity = 70/106 (66.04%), Postives = 88/106 (83.02%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            D+ +   ++DEV+LVGG TR+P +Q+ V + FGK P++ VNPDE VA+GAA+QGG+L GDVK++LLLDVTPLSLGIETLGG+ T LI RNT I +KKSQVFSTAAD
Sbjct:  318 DSGLKASEIDEVVLVGGSTRIPAIQKAVKDFFGKEPNRSVNPDEVVAIGAAVQGGVLAGDVKDVLLLDVTPLSLGIETLGGVMTTLIERNTAIPSKKSQVFSTAAD 423          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_ANATD (Chaperone protein dnaK OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=dnaK PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.739e-36
Identity = 70/106 (66.04%), Postives = 89/106 (83.96%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +T + +D+V+LVGG TR+P VQE V ++ GK P KG+NPDE VA+GAAIQ G+L G VK++LLLDVTPLSLGIETLGG+FT++I RNTTI T+KSQ+F+TA D
Sbjct:  297 DAKLTPEQIDKVILVGGSTRIPYVQEFVKKLTGKEPFKGINPDECVAIGAAIQAGVLAGQVKDILLLDVTPLSLGIETLGGVFTKIIERNTTIPTRKSQIFTTAVD 402          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_THISH (Chaperone protein dnaK OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=dnaK PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 2.272e-36
Identity = 72/106 (67.92%), Postives = 88/106 (83.02%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+D+V+LVGG TR+PKVQ+ V   FGK P K VNPDEAVA+GAAIQ G+L G+VK++LLLDVTPLSLGIETLGG+ T+LI +NTTI TK +QVFSTA D
Sbjct:  326 DAGLSVSDIDDVILVGGQTRMPKVQDAVKNFFGKEPRKDVNPDEAVAVGAAIQAGVLGGEVKDVLLLDVTPLSLGIETLGGVMTKLIEKNTTIPTKATQVFSTADD 431          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_STRU0 (Chaperone protein dnaK OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=dnaK PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 2.272e-36
Identity = 72/106 (67.92%), Postives = 88/106 (83.02%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  ++DEV+LVGG TR+P V E V    GK P+K VNPDE VA+GAAIQGG++ GDVK+++LLDVTPLSLGIET+GG+FT+LI RNTTI T KSQVFSTAAD
Sbjct:  296 DAGLSLSEIDEVILVGGSTRIPAVVEAVKAETGKEPNKSVNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIETMGGVFTKLIERNTTIPTSKSQVFSTAAD 401          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_SHESW (Chaperone protein dnaK OS=Shewanella sp. (strain W3-18-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 2.272e-36
Identity = 73/106 (68.87%), Postives = 88/106 (83.02%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA+++  DV+EV+LVGG TR+PKVQE V+  FGK P K VNPDEAVA+GAAIQ G+L GDVK++LLLDVTPLSLGIET+G + T+LI +NTTI TK  QVFSTA D
Sbjct:  325 DADLSVSDVNEVILVGGQTRMPKVQEAVTNFFGKEPRKDVNPDEAVAVGAAIQAGVLSGDVKDVLLLDVTPLSLGIETMGSVMTKLIEKNTTIPTKAQQVFSTADD 430          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_SHEPC (Chaperone protein dnaK OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=dnaK PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 2.272e-36
Identity = 73/106 (68.87%), Postives = 88/106 (83.02%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA+++  DV+EV+LVGG TR+PKVQE V+  FGK P K VNPDEAVA+GAAIQ G+L GDVK++LLLDVTPLSLGIET+G + T+LI +NTTI TK  QVFSTA D
Sbjct:  325 DADLSVSDVNEVILVGGQTRMPKVQEAVTNFFGKEPRKDVNPDEAVAVGAAIQAGVLSGDVKDVLLLDVTPLSLGIETMGSVMTKLIEKNTTIPTKAQQVFSTADD 430          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_PELPB (Chaperone protein dnaK OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 2.272e-36
Identity = 70/106 (66.04%), Postives = 90/106 (84.91%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            ++ +  K++DEV+LVGG TR+PKVQ +V + FGK P+K VNPDE VA+GAAIQGG+L+GDV ++LLLDVTPLSLGIETLGG+ T+LI+ NTTI T+K +VFSTA D
Sbjct:  319 NSKLEMKEIDEVVLVGGSTRIPKVQALVKDFFGKEPNKSVNPDEVVAIGAAIQGGVLKGDVTDVLLLDVTPLSLGIETLGGVMTKLIDANTTIPTRKQEVFSTAGD 424          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_ACIBL (Chaperone protein dnaK OS=Acidobacteria bacterium (strain Ellin345) GN=dnaK PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 2.272e-36
Identity = 71/106 (66.98%), Postives = 89/106 (83.96%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA I    +DEV+LVGG TR+P++Q+VV E FG+ P +GVNPDE VA+GAAIQGG+L+G+VK+LLLLDVTPL+L IETLGG+ T +I RNTTI TKK++ FSTAAD
Sbjct:  320 DAGIDASKIDEVVLVGGQTRMPRIQQVVKEFFGREPHRGVNPDEVVAIGAAIQGGVLKGEVKDLLLLDVTPLTLSIETLGGVATPMIPRNTTIPTKKTETFSTAAD 425          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_TERTT (Chaperone protein dnaK OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=dnaK PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 2.967e-36
Identity = 72/106 (67.92%), Postives = 90/106 (84.91%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA+++  ++D+V+LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAAIQG +L GDVK++LLLDVTPL+LGIET+GG+ T LI +NTTI TKKSQVFSTA D
Sbjct:  326 DADLSVSEIDDVILVGGQTRMPLVQQKVAEFFGKEPRKDVNPDEAVAMGAAIQGAVLSGDVKDVLLLDVTPLTLGIETMGGVATPLIEKNTTIPTKKSQVFSTAED 431          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_SHESM (Chaperone protein dnaK OS=Shewanella sp. (strain MR-4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 2.967e-36
Identity = 72/106 (67.92%), Postives = 88/106 (83.02%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA+++  D++EV+LVGG TR+PKVQE V+  FGK P K VNPDEAVA+GAAIQ G+L GDVK++LLLDVTPLSLGIET+G + T+LI +NTTI TK  QVFSTA D
Sbjct:  325 DADLSVSDINEVILVGGQTRMPKVQEAVTNFFGKEPRKDVNPDEAVAVGAAIQAGVLSGDVKDVLLLDVTPLSLGIETMGSVMTKLIEKNTTIPTKAQQVFSTADD 430          
The following BLAST results are available for this feature:
BLAST of CX287063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_BDEBA1.739e-3666.04Chaperone protein dnaK OS=Bdellovibrio bacteriovor... [more]
DNAK_ANATD1.739e-3666.04Chaperone protein dnaK OS=Anaerocellum thermophilu... [more]
DNAK_THISH2.272e-3667.92Chaperone protein dnaK OS=Thioalkalivibrio sp. (st... [more]
DNAK_STRU02.272e-3667.92Chaperone protein dnaK OS=Streptococcus uberis (st... [more]
DNAK_SHESW2.272e-3668.87Chaperone protein dnaK OS=Shewanella sp. (strain W... [more]
DNAK_SHEPC2.272e-3668.87Chaperone protein dnaK OS=Shewanella putrefaciens ... [more]
DNAK_PELPB2.272e-3666.04Chaperone protein dnaK OS=Pelodictyon phaeoclathra... [more]
DNAK_ACIBL2.272e-3666.98Chaperone protein dnaK OS=Acidobacteria bacterium ... [more]
DNAK_TERTT2.967e-3667.92Chaperone protein dnaK OS=Teredinibacter turnerae ... [more]
DNAK_SHESM2.967e-3667.92Chaperone protein dnaK OS=Shewanella sp. (strain M... [more]

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Properties
Property NameValue
Genbank descriptionC01004C06SK Veg1 Citrus clementina cDNA clone C01004C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287063 ID=CX287063; Name=CX287063; organism=Citrus clementina; type=EST; length=320bp
GATGCCAACATTACCACAAAGGATGTGGATGAGGTGCTTTTGGTTGGAGG
AATGACCCGTGTGCCAAAGGTGCAGGAAGTGGTCTCAGAAATCTTTGGTA
AGAGTCCAAGCAAGGGAGTAAATCCTGATGAGGCAGTTGCCCTTGGTGCT
GCTATTCAAGGTGGTATTCTTCGTGGCGACGTCAAAGAGTTGCTTCTCTT
GGATGTTACACCTCTGTCACTGGGTATTGAGACACTAGGTGGTATCTTTA
CCAGGTTGATCAATCGCAACACAACTATTTCAACAAAAAAGAGTCAGGTC
TTCTCAACAGCAGCTGATAA
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