CX287063

Overview
NameCX287063
Unique NameCX287063
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length320
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10231 contig Ccv1_Contig10231:1189..1508. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: HSP7Q_YEAST (Heat shock protein SSQ1, mitochondrial OS=Saccharomyces cerevisiae GN=SSQ1 PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 3.875e-36
Identity = 70/106 (66.04%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA+I  +D+DEV+LVGGMTR+PK++ VV ++FGKSP+  VNPDE VALGAAIQGGIL G++K +LLLDVTPL+LGIET GG F+ LI RNTT+  KK+++FST  D
Sbjct:  362 DADIEPEDIDEVILVGGMTRMPKIRSVVKDLFGKSPNSSVNPDETVALGAAIQGGILSGEIKNVLLLDVTPLTLGIETFGGAFSPLIPRNTTVPVKKTEIFSTGVD 467
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_STRMU (Chaperone protein dnaK OS=Streptococcus mutans GN=dnaK PE=2 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 3.875e-36
Identity = 71/106 (66.98%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  ++DEV+LVGG TR+P V + V    GK P+K VNPDE VA+GAAIQGG++ GDVK+++LLDVTPLSLGIET+GG+FT+LI+RNTTI T KSQVFSTAAD
Sbjct:  296 DAGLSLSEIDEVILVGGSTRIPAVVDAVKAETGKEPNKSVNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIETMGGVFTKLIDRNTTIPTSKSQVFSTAAD 401
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_SHEB9 (Chaperone protein dnaK OS=Shewanella baltica (strain OS195) GN=dnaK PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 3.875e-36
Identity = 72/106 (67.92%), Postives = 88/106 (83.02%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA+++  D++EV+LVGG TR+PKVQE V+  FGK P K VNPDEAVA+GAAIQ G+L GDVK++LLLDVTPLSLGIET+G + T+LI +NTTI TK  QVFSTA D
Sbjct:  325 DADLSVTDINEVILVGGQTRMPKVQEAVTNFFGKEPRKDVNPDEAVAVGAAIQAGVLSGDVKDVLLLDVTPLSLGIETMGSVMTKLIEKNTTIPTKAQQVFSTADD 430
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_SHEB8 (Chaperone protein dnaK OS=Shewanella baltica (strain OS185) GN=dnaK PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 3.875e-36
Identity = 72/106 (67.92%), Postives = 88/106 (83.02%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA+++  D++EV+LVGG TR+PKVQE V+  FGK P K VNPDEAVA+GAAIQ G+L GDVK++LLLDVTPLSLGIET+G + T+LI +NTTI TK  QVFSTA D
Sbjct:  325 DADLSVTDINEVILVGGQTRMPKVQEAVTNFFGKEPRKDVNPDEAVAVGAAIQAGVLSGDVKDVLLLDVTPLSLGIETMGSVMTKLIEKNTTIPTKAQQVFSTADD 430
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_SHEB5 (Chaperone protein dnaK OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=dnaK PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 3.875e-36
Identity = 72/106 (67.92%), Postives = 88/106 (83.02%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA+++  D++EV+LVGG TR+PKVQE V+  FGK P K VNPDEAVA+GAAIQ G+L GDVK++LLLDVTPLSLGIET+G + T+LI +NTTI TK  QVFSTA D
Sbjct:  325 DADLSVTDINEVILVGGQTRMPKVQEAVTNFFGKEPRKDVNPDEAVAVGAAIQAGVLSGDVKDVLLLDVTPLSLGIETMGSVMTKLIEKNTTIPTKAQQVFSTADD 430
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_SHEB2 (Chaperone protein dnaK OS=Shewanella baltica (strain OS223) GN=dnaK PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 3.875e-36
Identity = 72/106 (67.92%), Postives = 88/106 (83.02%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA+++  D++EV+LVGG TR+PKVQE V+  FGK P K VNPDEAVA+GAAIQ G+L GDVK++LLLDVTPLSLGIET+G + T+LI +NTTI TK  QVFSTA D
Sbjct:  325 DADLSVTDINEVILVGGQTRMPKVQEAVTNFFGKEPRKDVNPDEAVAVGAAIQAGVLSGDVKDVLLLDVTPLSLGIETMGSVMTKLIEKNTTIPTKAQQVFSTADD 430
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_RUBXD (Chaperone protein dnaK OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=dnaK PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 3.875e-36
Identity = 71/106 (66.98%), Postives = 88/106 (83.02%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   DVD+V+LVGG TR+P VQE V E+ GK P KG+NPDE VA+GAAIQ G+L G+VK++LLLDVTPLSLGIET GG+FT+LI RNTTI T+KS++F+TA D
Sbjct:  320 DAGLKPGDVDQVILVGGSTRIPAVQEKVKELTGKEPHKGINPDEVVAIGAAIQAGVLAGEVKDVLLLDVTPLSLGIETKGGVFTKLIERNTTIPTRKSEIFTTAED 425
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_ENT38 (Chaperone protein dnaK OS=Enterobacter sp. (strain 638) GN=dnaK PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 3.875e-36
Identity = 71/106 (66.98%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+ +V+LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAA+QGG+L G+VK++LLLDVTPLSLGIET+GG+ T LI++NTTI TK SQVFSTA D
Sbjct:  326 DAGLSVSDIQDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGEVKDVLLLDVTPLSLGIETMGGVMTALISKNTTIPTKHSQVFSTAED 431
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_CUPTR (Chaperone protein dnaK OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=dnaK PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 3.875e-36
Identity = 73/106 (68.87%), Postives = 87/106 (82.08%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   D+D+V+LVGGMTR+PKVQE V E FGK   K VNPDEAVA+GAAIQG +L GD K++LLLDVTPLSLGIETLGG+ T++I +NTTI TK +QVFSTA D
Sbjct:  327 DAGVKVSDIDDVILVGGMTRMPKVQEQVKEFFGKEARKDVNPDEAVAVGAAIQGSVLSGDRKDVLLLDVTPLSLGIETLGGVMTKMITKNTTIPTKHAQVFSTADD 432
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_BURPP (Chaperone protein dnaK OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=dnaK PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 3.875e-36
Identity = 72/106 (67.92%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   ++D+V+LVGGMTR+PKVQE V E FGK P + VNPDEAVA+GAAIQG +L GD K++LLLDVTPLSLGIETLGG+ T++IN+NTTI TK +QV+STA D
Sbjct:  327 DAGVKVGEIDDVILVGGMTRMPKVQEKVKEFFGKDPRRDVNPDEAVAVGAAIQGQVLSGDRKDVLLLDVTPLSLGIETLGGVMTKMINKNTTIPTKHAQVYSTADD 432
The following BLAST results are available for this feature:
BLAST of CX287063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7Q_YEAST3.875e-3666.04Heat shock protein SSQ1, mitochondrial OS=Saccharo... [more]
DNAK_STRMU3.875e-3666.98Chaperone protein dnaK OS=Streptococcus mutans GN=... [more]
DNAK_SHEB93.875e-3667.92Chaperone protein dnaK OS=Shewanella baltica (stra... [more]
DNAK_SHEB83.875e-3667.92Chaperone protein dnaK OS=Shewanella baltica (stra... [more]
DNAK_SHEB53.875e-3667.92Chaperone protein dnaK OS=Shewanella baltica (stra... [more]
DNAK_SHEB23.875e-3667.92Chaperone protein dnaK OS=Shewanella baltica (stra... [more]
DNAK_RUBXD3.875e-3666.98Chaperone protein dnaK OS=Rubrobacter xylanophilus... [more]
DNAK_ENT383.875e-3666.98Chaperone protein dnaK OS=Enterobacter sp. (strain... [more]
DNAK_CUPTR3.875e-3668.87Chaperone protein dnaK OS=Cupriavidus taiwanensis ... [more]
DNAK_BURPP3.875e-3667.92Chaperone protein dnaK OS=Burkholderia phytofirman... [more]

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Properties
Property NameValue
Genbank descriptionC01004C06SK Veg1 Citrus clementina cDNA clone C01004C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287063 ID=CX287063; Name=CX287063; organism=Citrus clementina; type=EST; length=320bp
GATGCCAACATTACCACAAAGGATGTGGATGAGGTGCTTTTGGTTGGAGG
AATGACCCGTGTGCCAAAGGTGCAGGAAGTGGTCTCAGAAATCTTTGGTA
AGAGTCCAAGCAAGGGAGTAAATCCTGATGAGGCAGTTGCCCTTGGTGCT
GCTATTCAAGGTGGTATTCTTCGTGGCGACGTCAAAGAGTTGCTTCTCTT
GGATGTTACACCTCTGTCACTGGGTATTGAGACACTAGGTGGTATCTTTA
CCAGGTTGATCAATCGCAACACAACTATTTCAACAAAAAAGAGTCAGGTC
TTCTCAACAGCAGCTGATAA
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