CX287063

Overview
NameCX287063
Unique NameCX287063
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length320
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10231 contig Ccv1_Contig10231:1189..1508. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_STAAR (Chaperone protein dnaK OS=Staphylococcus aureus (strain MRSA252) GN=dnaK PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.127e-35
Identity = 71/106 (66.98%), Postives = 85/106 (80.19%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +T  D+DEV+LVGG TR+P VQE V +  GK P+KGVNPDE VA+GAAIQGG++ GDVK+++LLDVTPLSLGIE LGG    LI RNTTI T KSQ++STA D
Sbjct:  296 DAGLTNSDIDEVILVGGSTRIPAVQEAVKKEIGKEPNKGVNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIEILGGRMNTLIERNTTIPTSKSQIYSTAVD 401
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_STAAN (Chaperone protein dnaK OS=Staphylococcus aureus (strain N315) GN=dnaK PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.127e-35
Identity = 71/106 (66.98%), Postives = 85/106 (80.19%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +T  D+DEV+LVGG TR+P VQE V +  GK P+KGVNPDE VA+GAAIQGG++ GDVK+++LLDVTPLSLGIE LGG    LI RNTTI T KSQ++STA D
Sbjct:  296 DAGLTNSDIDEVILVGGSTRIPAVQEAVKKEIGKEPNKGVNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIEILGGRMNTLIERNTTIPTSKSQIYSTAVD 401
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_STAAM (Chaperone protein dnaK OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=dnaK PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.127e-35
Identity = 71/106 (66.98%), Postives = 85/106 (80.19%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +T  D+DEV+LVGG TR+P VQE V +  GK P+KGVNPDE VA+GAAIQGG++ GDVK+++LLDVTPLSLGIE LGG    LI RNTTI T KSQ++STA D
Sbjct:  296 DAGLTNSDIDEVILVGGSTRIPAVQEAVKKEIGKEPNKGVNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIEILGGRMNTLIERNTTIPTSKSQIYSTAVD 401
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_STAAE (Chaperone protein dnaK OS=Staphylococcus aureus (strain Newman) GN=dnaK PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.127e-35
Identity = 71/106 (66.98%), Postives = 85/106 (80.19%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +T  D+DEV+LVGG TR+P VQE V +  GK P+KGVNPDE VA+GAAIQGG++ GDVK+++LLDVTPLSLGIE LGG    LI RNTTI T KSQ++STA D
Sbjct:  296 DAGLTNSDIDEVILVGGSTRIPAVQEAVKKEIGKEPNKGVNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIEILGGRMNTLIERNTTIPTSKSQIYSTAVD 401
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_STAAC (Chaperone protein dnaK OS=Staphylococcus aureus (strain COL) GN=dnaK PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.127e-35
Identity = 71/106 (66.98%), Postives = 85/106 (80.19%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +T  D+DEV+LVGG TR+P VQE V +  GK P+KGVNPDE VA+GAAIQGG++ GDVK+++LLDVTPLSLGIE LGG    LI RNTTI T KSQ++STA D
Sbjct:  296 DAGLTNSDIDEVILVGGSTRIPAVQEAVKKEIGKEPNKGVNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIEILGGRMNTLIERNTTIPTSKSQIYSTAVD 401
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_STAA9 (Chaperone protein dnaK OS=Staphylococcus aureus (strain JH9) GN=dnaK PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.127e-35
Identity = 71/106 (66.98%), Postives = 85/106 (80.19%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +T  D+DEV+LVGG TR+P VQE V +  GK P+KGVNPDE VA+GAAIQGG++ GDVK+++LLDVTPLSLGIE LGG    LI RNTTI T KSQ++STA D
Sbjct:  296 DAGLTNSDIDEVILVGGSTRIPAVQEAVKKEIGKEPNKGVNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIEILGGRMNTLIERNTTIPTSKSQIYSTAVD 401
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_STAA8 (Chaperone protein dnaK OS=Staphylococcus aureus (strain NCTC 8325) GN=dnaK PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.127e-35
Identity = 71/106 (66.98%), Postives = 85/106 (80.19%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +T  D+DEV+LVGG TR+P VQE V +  GK P+KGVNPDE VA+GAAIQGG++ GDVK+++LLDVTPLSLGIE LGG    LI RNTTI T KSQ++STA D
Sbjct:  296 DAGLTNSDIDEVILVGGSTRIPAVQEAVKKEIGKEPNKGVNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIEILGGRMNTLIERNTTIPTSKSQIYSTAVD 401
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_STAA3 (Chaperone protein dnaK OS=Staphylococcus aureus (strain USA300) GN=dnaK PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.127e-35
Identity = 71/106 (66.98%), Postives = 85/106 (80.19%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +T  D+DEV+LVGG TR+P VQE V +  GK P+KGVNPDE VA+GAAIQGG++ GDVK+++LLDVTPLSLGIE LGG    LI RNTTI T KSQ++STA D
Sbjct:  296 DAGLTNSDIDEVILVGGSTRIPAVQEAVKKEIGKEPNKGVNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIEILGGRMNTLIERNTTIPTSKSQIYSTAVD 401
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_STAA2 (Chaperone protein dnaK OS=Staphylococcus aureus (strain JH1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.127e-35
Identity = 71/106 (66.98%), Postives = 85/106 (80.19%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +T  D+DEV+LVGG TR+P VQE V +  GK P+KGVNPDE VA+GAAIQGG++ GDVK+++LLDVTPLSLGIE LGG    LI RNTTI T KSQ++STA D
Sbjct:  296 DAGLTNSDIDEVILVGGSTRIPAVQEAVKKEIGKEPNKGVNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIEILGGRMNTLIERNTTIPTSKSQIYSTAVD 401
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_STAA1 (Chaperone protein dnaK OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=dnaK PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.127e-35
Identity = 71/106 (66.98%), Postives = 85/106 (80.19%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +T  D+DEV+LVGG TR+P VQE V +  GK P+KGVNPDE VA+GAAIQGG++ GDVK+++LLDVTPLSLGIE LGG    LI RNTTI T KSQ++STA D
Sbjct:  296 DAGLTNSDIDEVILVGGSTRIPAVQEAVKKEIGKEPNKGVNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIEILGGRMNTLIERNTTIPTSKSQIYSTAVD 401
The following BLAST results are available for this feature:
BLAST of CX287063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_STAAR1.127e-3566.98Chaperone protein dnaK OS=Staphylococcus aureus (s... [more]
DNAK_STAAN1.127e-3566.98Chaperone protein dnaK OS=Staphylococcus aureus (s... [more]
DNAK_STAAM1.127e-3566.98Chaperone protein dnaK OS=Staphylococcus aureus (s... [more]
DNAK_STAAE1.127e-3566.98Chaperone protein dnaK OS=Staphylococcus aureus (s... [more]
DNAK_STAAC1.127e-3566.98Chaperone protein dnaK OS=Staphylococcus aureus (s... [more]
DNAK_STAA91.127e-3566.98Chaperone protein dnaK OS=Staphylococcus aureus (s... [more]
DNAK_STAA81.127e-3566.98Chaperone protein dnaK OS=Staphylococcus aureus (s... [more]
DNAK_STAA31.127e-3566.98Chaperone protein dnaK OS=Staphylococcus aureus (s... [more]
DNAK_STAA21.127e-3566.98Chaperone protein dnaK OS=Staphylococcus aureus (s... [more]
DNAK_STAA11.127e-3566.98Chaperone protein dnaK OS=Staphylococcus aureus (s... [more]

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Properties
Property NameValue
Genbank descriptionC01004C06SK Veg1 Citrus clementina cDNA clone C01004C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287063 ID=CX287063; Name=CX287063; organism=Citrus clementina; type=EST; length=320bp
GATGCCAACATTACCACAAAGGATGTGGATGAGGTGCTTTTGGTTGGAGG
AATGACCCGTGTGCCAAAGGTGCAGGAAGTGGTCTCAGAAATCTTTGGTA
AGAGTCCAAGCAAGGGAGTAAATCCTGATGAGGCAGTTGCCCTTGGTGCT
GCTATTCAAGGTGGTATTCTTCGTGGCGACGTCAAAGAGTTGCTTCTCTT
GGATGTTACACCTCTGTCACTGGGTATTGAGACACTAGGTGGTATCTTTA
CCAGGTTGATCAATCGCAACACAACTATTTCAACAAAAAAGAGTCAGGTC
TTCTCAACAGCAGCTGATAA
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