CX287063

Overview
NameCX287063
Unique NameCX287063
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length320
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10231 contig Ccv1_Contig10231:1189..1508. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_YERPG (Chaperone protein dnaK OS=Yersinia pestis bv. Antiqua (strain Angola) GN=dnaK PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.472e-35
Identity = 70/106 (66.04%), Postives = 88/106 (83.02%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+ +V+LVGG TR+P VQ+ V++ FGK P K VNPDEAVA+GAA+QGG+L G+VK++LLLDVTPLSLGIET+GG+ T LI +NTTI TK SQVFSTA D
Sbjct:  326 DAGLSVSDIQDVILVGGQTRMPMVQKKVADFFGKEPRKDVNPDEAVAIGAAVQGGVLSGEVKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAED 431
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_YERPE (Chaperone protein dnaK OS=Yersinia pestis GN=dnaK PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.472e-35
Identity = 70/106 (66.04%), Postives = 88/106 (83.02%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+ +V+LVGG TR+P VQ+ V++ FGK P K VNPDEAVA+GAA+QGG+L G+VK++LLLDVTPLSLGIET+GG+ T LI +NTTI TK SQVFSTA D
Sbjct:  326 DAGLSVSDIQDVILVGGQTRMPMVQKKVADFFGKEPRKDVNPDEAVAIGAAVQGGVLSGEVKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAED 431
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_YERPB (Chaperone protein dnaK OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=dnaK PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.472e-35
Identity = 70/106 (66.04%), Postives = 88/106 (83.02%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+ +V+LVGG TR+P VQ+ V++ FGK P K VNPDEAVA+GAA+QGG+L G+VK++LLLDVTPLSLGIET+GG+ T LI +NTTI TK SQVFSTA D
Sbjct:  326 DAGLSVSDIQDVILVGGQTRMPMVQKKVADFFGKEPRKDVNPDEAVAIGAAVQGGVLSGEVKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAED 431
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_YERPA (Chaperone protein dnaK OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=dnaK PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.472e-35
Identity = 70/106 (66.04%), Postives = 88/106 (83.02%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+ +V+LVGG TR+P VQ+ V++ FGK P K VNPDEAVA+GAA+QGG+L G+VK++LLLDVTPLSLGIET+GG+ T LI +NTTI TK SQVFSTA D
Sbjct:  326 DAGLSVSDIQDVILVGGQTRMPMVQKKVADFFGKEPRKDVNPDEAVAIGAAVQGGVLSGEVKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAED 431
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_YERP3 (Chaperone protein dnaK OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=dnaK PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.472e-35
Identity = 70/106 (66.04%), Postives = 88/106 (83.02%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+ +V+LVGG TR+P VQ+ V++ FGK P K VNPDEAVA+GAA+QGG+L G+VK++LLLDVTPLSLGIET+GG+ T LI +NTTI TK SQVFSTA D
Sbjct:  326 DAGLSVSDIQDVILVGGQTRMPMVQKKVADFFGKEPRKDVNPDEAVAIGAAVQGGVLSGEVKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAED 431
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_YERE8 (Chaperone protein dnaK OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=dnaK PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.472e-35
Identity = 70/106 (66.04%), Postives = 88/106 (83.02%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+ +V+LVGG TR+P VQ+ V++ FGK P K VNPDEAVA+GAA+QGG+L G+VK++LLLDVTPLSLGIET+GG+ T LI +NTTI TK SQVFSTA D
Sbjct:  326 DAGLSVSDIQDVILVGGQTRMPMVQKKVADFFGKEPRKDVNPDEAVAIGAAVQGGVLSGEVKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAED 431
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_WIGBR (Chaperone protein dnaK OS=Wigglesworthia glossinidia brevipalpis GN=dnaK PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.472e-35
Identity = 71/106 (66.98%), Postives = 88/106 (83.02%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   D+ +V+LVGG TR+P VQ+ VS+ FGK P K VNPDEAVA+GAA+QGG+L GDVK++LLLDVTPLSLGIET+GG+ T LI++NTTI TK SQ+FSTA D
Sbjct:  330 DAKLKIIDIKDVILVGGQTRMPLVQKKVSDFFGKEPRKDVNPDEAVAIGAAVQGGVLAGDVKDVLLLDVTPLSLGIETMGGVMTTLISKNTTIPTKHSQIFSTAED 435
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_THERP (Chaperone protein dnaK OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=dnaK PE=2 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 1.472e-35
Identity = 70/106 (66.04%), Postives = 88/106 (83.02%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++ +DVDEV+LVGG TR+P +Q  V E FGK P KG+NPDE VA+GAAIQ G+L G+VKE+LLLDVTPL+L IETLGG+ T +I RNTTI T+KSQ+F+TA+D
Sbjct:  321 DAGLSPRDVDEVVLVGGQTRMPLIQRKVQEFFGKEPHKGINPDEVVAIGAAIQAGVLAGEVKEVLLLDVTPLTLAIETLGGVATPIIPRNTTIPTRKSQIFTTASD 426
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_SODGM (Chaperone protein dnaK OS=Sodalis glossinidius (strain morsitans) GN=dnaK PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.472e-35
Identity = 71/106 (66.98%), Postives = 88/106 (83.02%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+ +V+LVGG TR+P VQ+ V++ FGK P K VNPDEAVA+GAA+QGG+L GDVK++LLLDVTPLSLGIET+GG+ T LI +NTTI TK SQVFSTA D
Sbjct:  326 DAGLSVSDIKDVILVGGQTRMPLVQKKVTDFFGKEPRKDVNPDEAVAIGAAVQGGVLAGDVKDVLLLDVTPLSLGIETMGGVMTPLIAKNTTIPTKHSQVFSTAED 431
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_LACDB (Chaperone protein dnaK OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=dnaK PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.472e-35
Identity = 70/106 (66.04%), Postives = 87/106 (82.08%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+D+V+L GG TR+P VQE V +  GK P   +NPDEAVALGAAIQGG++ GDVK+++LLDVTPLSLGIET GG+FT+LI+RNTTI T KSQ+FSTA D
Sbjct:  297 DAGLSVGDIDKVILNGGSTRIPAVQEAVKQWAGKEPDHSINPDEAVALGAAIQGGVISGDVKDIVLLDVTPLSLGIETKGGVFTKLIDRNTTIPTSKSQIFSTAVD 402
The following BLAST results are available for this feature:
BLAST of CX287063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_YERPG1.472e-3566.04Chaperone protein dnaK OS=Yersinia pestis bv. Anti... [more]
DNAK_YERPE1.472e-3566.04Chaperone protein dnaK OS=Yersinia pestis GN=dnaK ... [more]
DNAK_YERPB1.472e-3566.04Chaperone protein dnaK OS=Yersinia pseudotuberculo... [more]
DNAK_YERPA1.472e-3566.04Chaperone protein dnaK OS=Yersinia pestis bv. Anti... [more]
DNAK_YERP31.472e-3566.04Chaperone protein dnaK OS=Yersinia pseudotuberculo... [more]
DNAK_YERE81.472e-3566.04Chaperone protein dnaK OS=Yersinia enterocolitica ... [more]
DNAK_WIGBR1.472e-3566.98Chaperone protein dnaK OS=Wigglesworthia glossinid... [more]
DNAK_THERP1.472e-3566.04Chaperone protein dnaK OS=Thermomicrobium roseum (... [more]
DNAK_SODGM1.472e-3566.98Chaperone protein dnaK OS=Sodalis glossinidius (st... [more]
DNAK_LACDB1.472e-3566.04Chaperone protein dnaK OS=Lactobacillus delbruecki... [more]

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Properties
Property NameValue
Genbank descriptionC01004C06SK Veg1 Citrus clementina cDNA clone C01004C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287063 ID=CX287063; Name=CX287063; organism=Citrus clementina; type=EST; length=320bp
GATGCCAACATTACCACAAAGGATGTGGATGAGGTGCTTTTGGTTGGAGG
AATGACCCGTGTGCCAAAGGTGCAGGAAGTGGTCTCAGAAATCTTTGGTA
AGAGTCCAAGCAAGGGAGTAAATCCTGATGAGGCAGTTGCCCTTGGTGCT
GCTATTCAAGGTGGTATTCTTCGTGGCGACGTCAAAGAGTTGCTTCTCTT
GGATGTTACACCTCTGTCACTGGGTATTGAGACACTAGGTGGTATCTTTA
CCAGGTTGATCAATCGCAACACAACTATTTCAACAAAAAAGAGTCAGGTC
TTCTCAACAGCAGCTGATAA
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