CX287063

Overview
NameCX287063
Unique NameCX287063
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length320
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10231 contig Ccv1_Contig10231:1189..1508. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_LACDA (Chaperone protein dnaK OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=dnaK PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.472e-35
Identity = 70/106 (66.04%), Postives = 87/106 (82.08%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+D+V+L GG TR+P VQE V +  GK P   +NPDEAVALGAAIQGG++ GDVK+++LLDVTPLSLGIET GG+FT+LI+RNTTI T KSQ+FSTA D
Sbjct:  297 DAGLSVGDIDKVILNGGSTRIPAVQEAVKQWAGKEPDHSINPDEAVALGAAIQGGVISGDVKDIVLLDVTPLSLGIETKGGVFTKLIDRNTTIPTSKSQIFSTAVD 402          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_CHRSD (Chaperone protein dnaK OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=dnaK PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.472e-35
Identity = 72/106 (67.92%), Postives = 89/106 (83.96%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  ++DEV+LVGG TR+P VQ+ V++ FGK   K VNPDEAVA+GAAIQGG+L GDVK++LLLDVTPL+LGIETLGG+ T LI +NTTI TKK+QVFSTA D
Sbjct:  326 DAGLSASEIDEVILVGGQTRMPLVQKKVADFFGKDARKDVNPDEAVAVGAAIQGGVLGGDVKDVLLLDVTPLTLGIETLGGVMTPLIEKNTTIPTKKTQVFSTADD 431          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_CHLP8 (Chaperone protein dnaK OS=Chlorobaculum parvum (strain NCIB 8327) GN=dnaK PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.472e-35
Identity = 69/106 (65.09%), Postives = 89/106 (83.96%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            ++ +  K++DEV+LVGG +R+PKVQ +V E FGK P+K VNPDE VA+GAAIQGG+L+GDV ++LLLDVTPLSLGIETLGG+ T+LI  N+TI T+K + FSTAAD
Sbjct:  319 NSKLDMKEIDEVVLVGGSSRIPKVQALVKEFFGKEPNKSVNPDEVVAIGAAIQGGVLQGDVTDVLLLDVTPLSLGIETLGGVMTKLIEANSTIPTRKQETFSTAAD 424          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_BURP8 (Chaperone protein dnaK OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=dnaK PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.472e-35
Identity = 71/106 (66.98%), Postives = 88/106 (83.02%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   ++D+V+LVGG TR+PKVQE V E FGK P + VNPDEAVA+GAAIQG +L GD K++LLLDVTPLSLGIETLGG+ T++IN+NTTI TK +QV+STA D
Sbjct:  327 DAGVKVGEIDDVILVGGQTRMPKVQEKVKEFFGKDPRRDVNPDEAVAVGAAIQGQVLSGDRKDVLLLDVTPLSLGIETLGGVMTKMINKNTTIPTKHAQVYSTADD 432          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_BUCBP (Chaperone protein dnaK OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=dnaK PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.472e-35
Identity = 70/106 (66.04%), Postives = 89/106 (83.96%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+D+V+LVGG TR+P VQ+ V+E F K P K VNPDEAVA+GAA+QGG+L G+VK++LLLDVTPLSLGIET+GG+ T LI++NTTI TK SQ+FSTA D
Sbjct:  326 DAKLSISDIDDVILVGGQTRMPMVQKKVAEFFKKEPRKDVNPDEAVAVGAAVQGGVLSGEVKDVLLLDVTPLSLGIETMGGVMTTLISKNTTIPTKHSQIFSTAED 431          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_VIBVY (Chaperone protein dnaK OS=Vibrio vulnificus (strain YJ016) GN=dnaK PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.923e-35
Identity = 69/106 (65.09%), Postives = 89/106 (83.96%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA+++  D+ +V+LVGG TR+P VQ  V+E FGK P + VNPDEAVA+GAA+QGG+L GDVK++LLLDVTPLSLGIET+GG+ T+L+ +NTTI TK +QVFSTA D
Sbjct:  325 DADLSVGDITDVILVGGQTRMPMVQAKVTEFFGKEPRRDVNPDEAVAVGAAVQGGVLAGDVKDVLLLDVTPLSLGIETMGGVMTKLVEKNTTIPTKANQVFSTAED 430          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_VIBVU (Chaperone protein dnaK OS=Vibrio vulnificus GN=dnaK PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.923e-35
Identity = 69/106 (65.09%), Postives = 89/106 (83.96%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA+++  D+ +V+LVGG TR+P VQ  V+E FGK P + VNPDEAVA+GAA+QGG+L GDVK++LLLDVTPLSLGIET+GG+ T+L+ +NTTI TK +QVFSTA D
Sbjct:  325 DADLSVGDITDVILVGGQTRMPMVQAKVTEFFGKEPRRDVNPDEAVAVGAAVQGGVLAGDVKDVLLLDVTPLSLGIETMGGVMTKLVEKNTTIPTKANQVFSTAED 430          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_VEREI (Chaperone protein dnaK OS=Verminephrobacter eiseniae (strain EF01-2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.923e-35
Identity = 71/106 (66.98%), Postives = 88/106 (83.02%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  D+ +V+LVGGMTR+PKVQE+V E FGK P K VNPDEAVA+GAAIQG +L G+ K++LLLDVTPLSLGIETLGG+ T++I +NTTI TK +Q FSTA D
Sbjct:  327 DAGVSVSDIHDVILVGGMTRMPKVQEMVKEFFGKDPRKDVNPDEAVAVGAAIQGQVLTGERKDVLLLDVTPLSLGIETLGGVMTKMITKNTTIPTKFAQTFSTADD 432          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_STAHJ (Chaperone protein dnaK OS=Staphylococcus haemolyticus (strain JCSC1435) GN=dnaK PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.923e-35
Identity = 71/106 (66.98%), Postives = 86/106 (81.13%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++T ++DEV+LVGG TR+P VQE V +  GK P KGVNPDE VA+GAAIQGG++ GDVK+++LLDVTPLSLGIE +GG    LI RNTTI T KSQV+STAAD
Sbjct:  296 DAGLSTSEIDEVILVGGSTRIPAVQEAVKKEIGKDPHKGVNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIEIMGGRMNTLIERNTTIPTSKSQVYSTAAD 401          
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_SHEDO (Chaperone protein dnaK OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=dnaK PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.923e-35
Identity = 70/106 (66.04%), Postives = 89/106 (83.96%), Query Frame = 1
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA+++  +++EV+LVGG TR+PKVQE V+  FGK P K VNPDEAVA+GAAIQ G+L G+VK++LLLDVTPLSLGIET+G + T+LI++NTTI TK  QVFSTA D
Sbjct:  325 DADLSVSEINEVILVGGQTRMPKVQEAVTNFFGKEPRKDVNPDEAVAVGAAIQAGVLSGEVKDVLLLDVTPLSLGIETMGSVMTKLIDKNTTIPTKAQQVFSTADD 430          
The following BLAST results are available for this feature:
BLAST of CX287063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_LACDA1.472e-3566.04Chaperone protein dnaK OS=Lactobacillus delbruecki... [more]
DNAK_CHRSD1.472e-3567.92Chaperone protein dnaK OS=Chromohalobacter salexig... [more]
DNAK_CHLP81.472e-3565.09Chaperone protein dnaK OS=Chlorobaculum parvum (st... [more]
DNAK_BURP81.472e-3566.98Chaperone protein dnaK OS=Burkholderia phymatum (s... [more]
DNAK_BUCBP1.472e-3566.04Chaperone protein dnaK OS=Buchnera aphidicola subs... [more]
DNAK_VIBVY1.923e-3565.09Chaperone protein dnaK OS=Vibrio vulnificus (strai... [more]
DNAK_VIBVU1.923e-3565.09Chaperone protein dnaK OS=Vibrio vulnificus GN=dna... [more]
DNAK_VEREI1.923e-3566.98Chaperone protein dnaK OS=Verminephrobacter eiseni... [more]
DNAK_STAHJ1.923e-3566.98Chaperone protein dnaK OS=Staphylococcus haemolyti... [more]
DNAK_SHEDO1.923e-3566.04Chaperone protein dnaK OS=Shewanella denitrificans... [more]

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Properties
Property NameValue
Genbank descriptionC01004C06SK Veg1 Citrus clementina cDNA clone C01004C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287063 ID=CX287063; Name=CX287063; organism=Citrus clementina; type=EST; length=320bp
GATGCCAACATTACCACAAAGGATGTGGATGAGGTGCTTTTGGTTGGAGG
AATGACCCGTGTGCCAAAGGTGCAGGAAGTGGTCTCAGAAATCTTTGGTA
AGAGTCCAAGCAAGGGAGTAAATCCTGATGAGGCAGTTGCCCTTGGTGCT
GCTATTCAAGGTGGTATTCTTCGTGGCGACGTCAAAGAGTTGCTTCTCTT
GGATGTTACACCTCTGTCACTGGGTATTGAGACACTAGGTGGTATCTTTA
CCAGGTTGATCAATCGCAACACAACTATTTCAACAAAAAAGAGTCAGGTC
TTCTCAACAGCAGCTGATAA
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