CX287063

Overview
NameCX287063
Unique NameCX287063
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length320
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10231 contig Ccv1_Contig10231:1189..1508. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_EHRRG (Chaperone protein dnaK OS=Ehrlichia ruminantium (strain Gardel) GN=dnaK PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.287e-39
Identity = 80/106 (75.47%), Postives = 90/106 (84.91%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA I+   +DEV+LVGGMTRVPK+ + V E FGK P KGVNPDE VA+GAAIQGGIL GDV+++LLLDVTPLSLGIETLGG+FT LI RNTTI TKKSQVFSTA D
Sbjct:  324 DAGISADKIDEVVLVGGMTRVPKIIQTVKEFFGKEPHKGVNPDEVVAIGAAIQGGILAGDVRDVLLLDVTPLSLGIETLGGVFTPLIERNTTIPTKKSQVFSTAED 429
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_DESVV (Chaperone protein dnaK OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.287e-39
Identity = 79/106 (74.53%), Postives = 92/106 (86.79%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +T   +DEV+LVGGMTR+P VQ+ VSE FGK P++ VNPDE VA+GAAIQGGIL GDVK++LLLDVTPLSLGIETLGG+FTRLI RNTTI T+KSQ F+TAAD
Sbjct:  321 DAGLTAAQIDEVVLVGGMTRMPLVQKRVSEFFGKEPNRSVNPDEVVAMGAAIQGGILAGDVKDVLLLDVTPLSLGIETLGGVFTRLIERNTTIPTRKSQTFTTAAD 426
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_DESVH (Chaperone protein dnaK OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=dnaK PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.287e-39
Identity = 79/106 (74.53%), Postives = 92/106 (86.79%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +T   +DEV+LVGGMTR+P VQ+ VSE FGK P++ VNPDE VA+GAAIQGGIL GDVK++LLLDVTPLSLGIETLGG+FTRLI RNTTI T+KSQ F+TAAD
Sbjct:  321 DAGLTAAQIDEVVLVGGMTRMPLVQKRVSEFFGKEPNRSVNPDEVVAMGAAIQGGILAGDVKDVLLLDVTPLSLGIETLGGVFTRLIERNTTIPTRKSQTFTTAAD 426
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_TREPS (Chaperone protein dnaK OS=Treponema pallidum subsp. pallidum (strain SS14) GN=dnaK PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 1.681e-39
Identity = 79/106 (74.53%), Postives = 93/106 (87.74%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA I+   +DE+LLVGG TR+PKV  V+ ++FGK  SKGVNPDEAVA+GAAIQGGIL GDVK++LLLDVTPLSLGIET+GG+FT LI+RNTTI T+KSQVFSTAAD
Sbjct:  320 DAGISADRIDEILLVGGSTRMPKVAHVIKDVFGKEGSKGVNPDEAVAIGAAIQGGILGGDVKDVLLLDVTPLSLGIETMGGVFTPLISRNTTIPTRKSQVFSTAAD 425
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_TREPA (Chaperone protein dnaK OS=Treponema pallidum GN=dnaK PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 1.681e-39
Identity = 79/106 (74.53%), Postives = 93/106 (87.74%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA I+   +DE+LLVGG TR+PKV  V+ ++FGK  SKGVNPDEAVA+GAAIQGGIL GDVK++LLLDVTPLSLGIET+GG+FT LI+RNTTI T+KSQVFSTAAD
Sbjct:  320 DAGISADRIDEILLVGGSTRMPKVAHVIKDVFGKEGSKGVNPDEAVAIGAAIQGGILGGDVKDVLLLDVTPLSLGIETMGGVFTPLISRNTTIPTRKSQVFSTAAD 425
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_RHOCA (Chaperone protein dnaK OS=Rhodobacter capsulatus GN=dnaK PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 1.681e-39
Identity = 77/106 (72.64%), Postives = 94/106 (88.68%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA ++  ++DEV+LVGGMTR+P+V E V++ FGK P KGVNPDE VALGAAIQ G+L+GDVK+++LLDVTPLSLGIETLGG+FTRLI+RNTTI TKKSQ+FSTA D
Sbjct:  322 DAGVSKDEIDEVVLVGGMTRMPRVVEEVTKFFGKEPHKGVNPDEVVALGAAIQAGVLQGDVKDVVLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQIFSTAED 427
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_NOVAD (Chaperone protein dnaK OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=dnaK PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 1.681e-39
Identity = 77/106 (72.64%), Postives = 94/106 (88.68%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA I+ K++D+V+LVGGMTR+PKV+EVV + FGK P  GVNPDE VA+GAAIQ G+L+GDVK++LLLDVTPLSLGIETLGGI T++I+RNTTI TKKSQV+STA D
Sbjct:  325 DAGISAKEIDDVVLVGGMTRMPKVREVVKDFFGKEPHTGVNPDEVVAMGAAIQAGVLQGDVKDVLLLDVTPLSLGIETLGGIMTKMIDRNTTIPTKKSQVYSTAED 430
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_DESDA (Chaperone protein dnaK OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=dnaK PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 1.681e-39
Identity = 77/106 (72.64%), Postives = 93/106 (87.74%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +T   +DEV+LVGGMTR+P VQ+VV + FGK P++ VNPDE VA+GAAIQGGIL GDVK++LLLDVTPLSLGIET+GG+FTRLI RNTTI T+KSQVF+TA+D
Sbjct:  320 DAGMTADQIDEVILVGGMTRMPLVQQVVGKFFGKEPNRSVNPDEVVAMGAAIQGGILSGDVKDVLLLDVTPLSLGIETMGGVFTRLIERNTTIPTRKSQVFTTASD 425
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_DESAD (Chaperone protein dnaK OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=dnaK PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 1.681e-39
Identity = 77/106 (72.64%), Postives = 92/106 (86.79%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +T  D+DEV+LVGGMTR+P VQ+ V E FGK P++ VNPDE VA+GA+IQGGIL GDVK++LLLDVTPLSLGIET+GG+FT LI RNTTI T+KSQVF+TAAD
Sbjct:  320 DAGLTAADIDEVILVGGMTRMPLVQQKVQEFFGKEPNRSVNPDEVVAMGASIQGGILAGDVKDVLLLDVTPLSLGIETMGGVFTNLIERNTTIPTRKSQVFTTAAD 425
[Close]
BLAST of CX287063 vs. ExPASy Swiss-Prot
Match: DNAK_BORRA (Chaperone protein dnaK OS=Borrelia recurrentis (strain A1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 1.681e-39
Identity = 76/106 (71.70%), Postives = 93/106 (87.74%), Query Frame = 1 
Query:    1 DANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTISTKKSQVFSTAAD 318
            DA +   D++EV+LVGG TR+P +Q++V EIFG+ P+KGVNPDEAVA+GAAIQGGIL G+ K+++LLDVTPLSLGIETLGG+ T+LI RNTTI TKKSQVFSTAAD
Sbjct:  321 DAGLKASDINEVILVGGSTRIPAIQKIVKEIFGQEPNKGVNPDEAVAIGAAIQGGILTGEAKDMVLLDVTPLSLGIETLGGVMTKLIERNTTIPTKKSQVFSTAAD 426
The following BLAST results are available for this feature:
BLAST of CX287063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_EHRRG1.287e-3975.47Chaperone protein dnaK OS=Ehrlichia ruminantium (s... [more]
DNAK_DESVV1.287e-3974.53Chaperone protein dnaK OS=Desulfovibrio vulgaris s... [more]
DNAK_DESVH1.287e-3974.53Chaperone protein dnaK OS=Desulfovibrio vulgaris (... [more]
DNAK_TREPS1.681e-3974.53Chaperone protein dnaK OS=Treponema pallidum subsp... [more]
DNAK_TREPA1.681e-3974.53Chaperone protein dnaK OS=Treponema pallidum GN=dn... [more]
DNAK_RHOCA1.681e-3972.64Chaperone protein dnaK OS=Rhodobacter capsulatus G... [more]
DNAK_NOVAD1.681e-3972.64Chaperone protein dnaK OS=Novosphingobium aromatic... [more]
DNAK_DESDA1.681e-3972.64Chaperone protein dnaK OS=Desulfovibrio desulfuric... [more]
DNAK_DESAD1.681e-3972.64Chaperone protein dnaK OS=Desulfovibrio salexigens... [more]
DNAK_BORRA1.681e-3971.70Chaperone protein dnaK OS=Borrelia recurrentis (st... [more]

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Properties
Property NameValue
Genbank descriptionC01004C06SK Veg1 Citrus clementina cDNA clone C01004C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287063 ID=CX287063; Name=CX287063; organism=Citrus clementina; type=EST; length=320bp
GATGCCAACATTACCACAAAGGATGTGGATGAGGTGCTTTTGGTTGGAGG
AATGACCCGTGTGCCAAAGGTGCAGGAAGTGGTCTCAGAAATCTTTGGTA
AGAGTCCAAGCAAGGGAGTAAATCCTGATGAGGCAGTTGCCCTTGGTGCT
GCTATTCAAGGTGGTATTCTTCGTGGCGACGTCAAAGAGTTGCTTCTCTT
GGATGTTACACCTCTGTCACTGGGTATTGAGACACTAGGTGGTATCTTTA
CCAGGTTGATCAATCGCAACACAACTATTTCAACAAAAAAGAGTCAGGTC
TTCTCAACAGCAGCTGATAA
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