CX287068

Overview
NameCX287068
Unique NameCX287068
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length581
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5982 contig Ccv1_Contig5982:297..877. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287068 vs. ExPASy Swiss-Prot
Match: T13H_TAXCU (Taxane 13-alpha-hydroxylase OS=Taxus cuspidata GN=CYP725A2 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.636e-13
Identity = 42/154 (27.27%), Postives = 69/154 (44.81%), Query Frame = 3
Query:  114 ETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSW--TDRVLLMEEAKKITFELTVKQLMSFDPNEWTESL 569
            ETLQ + +  +  P+ FI+ R+ +FG +F T I G PTV    P  NR +L NE KL + S+P S+  L+G+  L    G  H+ + +    F     +++H       + R   + W   D   ++   K + F +  +           E L
Sbjct:   50 ETLQFVRSLGSSTPQQFIEERMSKFGDVFKTSIIGHPTVVLCGPAGNRLVLSNENKLVQMSWPSSMMKLIGEDCLGGKTGEQHRIVRAALTRFLGPQALQNHFAKMSSGIQRHINEKWKGKDEATVLPLVKDLVFSVASRLFFGITEEHLQEQL 203          
BLAST of CX287068 vs. ExPASy Swiss-Prot
Match: ABAH3_ORYSJ (Abscisic acid 8'-hydroxylase 3 OS=Oryza sativa subsp. japonica GN=CYP707A7 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.137e-13
Identity = 46/138 (33.33%), Postives = 71/138 (51.45%), Query Frame = 3
Query:  114 ETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDRVLLMEEA-KKITFELTV 524
            ETLQL +    ++P  F   + KR+G IF THI G P V  A PE  RF+L  +  LF+ +YP S   ++G  +L   +G  H R+  L         +R  L+ D++  VR  + SW   V     A K+++F++ +
Sbjct:   56 ETLQLYS----QDPNVFFASKQKRYGEIFKTHILGCPCVMLASPEAARFVLVTQAHLFKPTYPRSKERMIGPSALFFHQGDYHLRLRKLVQGPLGPDALR-ALVPDVEAAVRSTLASWDGNVSSTFHAMKRLSFDVGI 188          
BLAST of CX287068 vs. ExPASy Swiss-Prot
Match: ABAH3_ORYSI (Abscisic acid 8'-hydroxylase 3 OS=Oryza sativa subsp. indica GN=CYP707A7 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.137e-13
Identity = 46/138 (33.33%), Postives = 71/138 (51.45%), Query Frame = 3
Query:  114 ETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDRVLLMEEA-KKITFELTV 524
            ETLQL +    ++P  F   + KR+G IF THI G P V  A PE  RF+L  +  LF+ +YP S   ++G  +L   +G  H R+  L         +R  L+ D++  VR  + SW   V     A K+++F++ +
Sbjct:   56 ETLQLYS----QDPNVFFASKQKRYGEIFKTHILGCPCVMLASPEAARFVLVTQAHLFKPTYPRSKERMIGPSALFFNQGDYHLRLRKLVQGPLGPDALR-ALVPDVEAAVRSTLASWDGNVSSTFHAMKRLSFDVGI 188          
BLAST of CX287068 vs. ExPASy Swiss-Prot
Match: ABAH2_ARATH (Abscisic acid 8'-hydroxylase 2 OS=Arabidopsis thaliana GN=CYP707A2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.121e-13
Identity = 45/139 (32.37%), Postives = 70/139 (50.36%), Query Frame = 3
Query:  114 ETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR--VLLMEEAKKITFELTV 524
            ETL+L     TENP  F   R  ++G IF THI G P V  + PE  R +L ++  LF+ +YP S   ++G  +L   +G  H  +  L  S    S +R   +  I+ LV   + SWT +  +  +E  K+  F++ +
Sbjct:   61 ETLRLY----TENPNSFFATRQNKYGDIFKTHILGCPCVMISSPEAARMVLVSKAHLFKPTYPPSKERMIGPEALFFHQGPYHSTLKRLVQSSFMPSALRP-TVSHIELLVLQTLSSWTSQKSINTLEYMKRYAFDVAI 194          
BLAST of CX287068 vs. ExPASy Swiss-Prot
Match: KAO2_ARATH (Ent-kaurenoic acid oxidase 2 OS=Arabidopsis thaliana GN=KAO2 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 4.030e-12
Identity = 43/155 (27.74%), Postives = 76/155 (49.03%), Query Frame = 3
Query:  129 IAAYKTENPEPFIDVRVKRFG--SIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWT--DRVLLMEEAKKITFELTVKQLMSFDPNEWTESLRKEY 581
            + A+KT +PE FI   + R+G   I+  H+FG P V    PET R +L ++   F   +P S   L+G+ S + +    HKR+  LT +  N        +  I+  V   ++ W+    +  +   +K+TF++ +   +S +     +SL +EY
Sbjct:   61 LRAFKTSDPESFIQSYITRYGRTGIYKAHMFGYPCVLVTTPETCRRVLTDDDA-FHIGWPKSTMKLIGRKSFVGISFEEHKRLRRLTSAPVNGPEALSVYIQFIEETVNTDLEKWSKMGEIEFLSHLRKLTFKVIMYIFLSSESEHVMDSLEREY 214          
BLAST of CX287068 vs. ExPASy Swiss-Prot
Match: CP26A_DANRE (Cytochrome P450 26A1 OS=Danio rerio GN=cyp26a1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.030e-12
Identity = 44/151 (29.14%), Postives = 80/151 (52.98%), Query Frame = 3
Query:  114 ETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHK-RMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR---VLLMEEAKKITFELTVKQLMSFDPNE 554
            ETLQLI   +      F+ ++ +++G I+ TH+FG PTV     +  R IL  E KL    +P S+  +LG  +L  + G  HK +  ++  +F+  ++  +H +  I + V+  +  W  +   VL+  E KK+ F + ++ L+ F+P +
Sbjct:   56 ETLQLILQRRK-----FLRMKRQKYGCIYKTHLFGNPTVRVMGADNVRQILLGEHKLVSVQWPASVRTILGSDTLSNVHGVQHKNKKKAIMRAFSRDAL--EHYIPVIQQEVKSAIQEWLQKDSCVLVYPEMKKLMFRIAMRILLGFEPEQ 199          
BLAST of CX287068 vs. ExPASy Swiss-Prot
Match: ABAH2_ORYSJ (Abscisic acid 8'-hydroxylase 2 OS=Oryza sativa subsp. japonica GN=CYP707A6 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.264e-12
Identity = 43/139 (30.94%), Postives = 72/139 (51.80%), Query Frame = 3
Query:  114 ETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR--VLLMEEAKKITFELTV 524
            ETLQL +    ++P  F   + KR+G IF T++ G P V  A PE  RF+L ++ +LF+ +YP S   ++G  +L   +G  H R+  L  +      +R  L+ D+D  V   + +W+           KK++F++ V
Sbjct:   63 ETLQLYS----QDPNVFFASKQKRYGEIFKTNLLGCPCVMLASPEAARFVLVSQARLFKPTYPPSKERMIGPSALFFHQGEYHLRLRRLVQAALAPDSLR-ALVPDVDAAVAATLAAWSGGHVASTFHAMKKLSFDVGV 196          
BLAST of CX287068 vs. ExPASy Swiss-Prot
Match: ABAH2_ORYSI (Abscisic acid 8'-hydroxylase 2 OS=Oryza sativa subsp. indica GN=CYP707A6 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.264e-12
Identity = 43/139 (30.94%), Postives = 72/139 (51.80%), Query Frame = 3
Query:  114 ETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR--VLLMEEAKKITFELTV 524
            ETLQL +    ++P  F   + KR+G IF T++ G P V  A PE  RF+L ++ +LF+ +YP S   ++G  +L   +G  H R+  L  +      +R  L+ D+D  V   + +W+           KK++F++ V
Sbjct:   63 ETLQLYS----QDPNVFFASKQKRYGEIFKTNLLGCPCVMLASPEAARFVLVSQARLFKPTYPPSKERMIGPSALFFHQGEYHLRLRRLVQAALAPDSLR-ALVPDVDAAVAATLAAWSGGHVASTFHAMKKLSFDVGV 196          
BLAST of CX287068 vs. ExPASy Swiss-Prot
Match: T5H_TAXCU (Taxadiene 5-alpha hydroxylase OS=Taxus cuspidata PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 8.979e-12
Identity = 35/103 (33.98%), Postives = 54/103 (52.43%), Query Frame = 3
Query:  114 ETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHL 422
            E+   + A ++ + E F D RVK+FG +F T + G PTV    P  NR IL NE KL + S+P     L+G++S+   +G  H  M S    F     ++ ++
Sbjct:   64 ESFIFLRALRSNSLEQFFDERVKKFGLVFKTSLIGHPTVVLCGPAGNRLILSNEEKLVQMSWPAQFMKLMGENSVATRRGEDHIVMRSALAGFFGPGALQSYI 166          
BLAST of CX287068 vs. ExPASy Swiss-Prot
Match: ABAH1_ORYSJ (Abscisic acid 8'-hydroxylase 1 OS=Oryza sativa subsp. japonica GN=CYP707A5 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.532e-11
Identity = 44/158 (27.85%), Postives = 76/158 (48.10%), Query Frame = 3
Query:  114 ETLQLIAAYKTENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSL-TMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR-VLLMEEAKKITFELTVKQLMSFDPNEWTESLRKEY 581
            ET QL   Y ++NP  F + +  ++G IF THI G P V  + PE  RF+L  +  LF+ ++P S   +LG  ++   +G  H  +  + + +F+  SI      ++   L  LH  SW  + V   +E K     + +  +   +   + E L++ Y
Sbjct:   51 ETFQL---YSSKNPNVFFNKKRNKYGPIFKTHILGCPCVMVSSPEAARFVLVTQAHLFKPTFPASKERMLGPQAIFFQQGDYHAHLRRIVSRAFSPESIRASVPAIEAIALRSLH--SWDGQFVNTFQEMKTYALNVALLSIFGEEEMRYIEELKQCY 203          
The following BLAST results are available for this feature:
BLAST of CX287068 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
T13H_TAXCU1.636e-1327.27Taxane 13-alpha-hydroxylase OS=Taxus cuspidata GN=... [more]
ABAH3_ORYSJ2.137e-1333.33Abscisic acid 8'-hydroxylase 3 OS=Oryza sativa sub... [more]
ABAH3_ORYSI2.137e-1333.33Abscisic acid 8'-hydroxylase 3 OS=Oryza sativa sub... [more]
ABAH2_ARATH8.121e-1332.37Abscisic acid 8'-hydroxylase 2 OS=Arabidopsis thal... [more]
KAO2_ARATH4.030e-1227.74Ent-kaurenoic acid oxidase 2 OS=Arabidopsis thalia... [more]
CP26A_DANRE4.030e-1229.14Cytochrome P450 26A1 OS=Danio rerio GN=cyp26a1 PE=... [more]
ABAH2_ORYSJ5.264e-1230.94Abscisic acid 8'-hydroxylase 2 OS=Oryza sativa sub... [more]
ABAH2_ORYSI5.264e-1230.94Abscisic acid 8'-hydroxylase 2 OS=Oryza sativa sub... [more]
T5H_TAXCU8.979e-1233.98Taxadiene 5-alpha hydroxylase OS=Taxus cuspidata P... [more]
ABAH1_ORYSJ1.532e-1127.85Abscisic acid 8'-hydroxylase 1 OS=Oryza sativa sub... [more]

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Properties
Property NameValue
Genbank descriptionC01004C11SK Veg1 Citrus clementina cDNA clone C01004C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287068 ID=CX287068; Name=CX287068; organism=Citrus clementina; type=EST; length=581bp
ATGATCTCGTTCTTTATATTTCCATTTCCACAGTCATTTTCTTTATTATA
AAAAGGTCCCGGAGCCGGCGGCTGCGGTTGCCGCCGGGAAGCCTCGGCCT
GCCCTTTCTTGGGGAGACCTTGCAACTCATAGCCGCATACAAAACTGAGA
ACCCGGAGCCCTTCATTGACGTGAGGGTGAAGCGGTTCGGTTCGATATTC
ACAACCCACATATTTGGCGAGCCGACGGTGTTCTCCGCCGACCCGGAAAC
GAACCGGTTCATCTTGCAGAATGAAGGGAAGTTGTTCGAGTGCAGCTACC
CCGGCTCGATATCGAACCTTCTGGGGAAGCACTCGTTGCTGCTGATGAAG
GGGAGTCTTCATAAGAGAATGCATTCTTTAACCATGAGCTTCGCTAATTC
GTCGATCATTAGAGACCATCTTTTGGTCGACATAGACCGGCTGGTCCGGC
TCCATATGGATTCCTGGACCGACCGGGTCCTTCTCATGGAAGAAGCCAAG
AAGATAACATTTGAGTTAACAGTGAAGCAGCTGATGAGTTTTGATCCGAA
TGAATGGACCGAGAGTCTCAGAAAAGAATAC
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