CX287073
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287073 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.135e-13 Identity = 45/108 (41.67%), Postives = 61/108 (56.48%), Query Frame = -1 Query: 228 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEK-YLGGSGDPAYXXXXXXXXXXXGKDEQSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 548 ++ LMGF E R G +G G +K Y GG+ DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DH+ADPV NN Sbjct: 164 QVVLMGFVEGYR----VGGGPLGE----GLDKIYPGGAFDPL----------GLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHVADPVANN 253
BLAST of CX287073 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.135e-13 Identity = 45/108 (41.67%), Postives = 61/108 (56.48%), Query Frame = -1 Query: 228 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEK-YLGGSGDPAYXXXXXXXXXXXGKDEQSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 548 ++ LMGF E R G +G G +K Y GG+ DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DH+ADPV NN Sbjct: 136 QVVLMGFVEGYR----VGGGPLGE----GLDKIYPGGAFDPL----------GLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPVANN 225
BLAST of CX287073 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.135e-13 Identity = 38/75 (50.67%), Postives = 48/75 (64.00%), Query Frame = -1 Query: 228 YLGGSGDPAYXXXXXXXXXXXGKDEQSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 452 Y GGS DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN Sbjct: 193 YPGGSFDPL----------GLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 257
BLAST of CX287073 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.135e-13 Identity = 38/75 (50.67%), Postives = 48/75 (64.00%), Query Frame = -1 Query: 228 YLGGSGDPAYXXXXXXXXXXXGKDEQSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 452 Y GGS DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN Sbjct: 130 YPGGSFDPL----------GLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 194
BLAST of CX287073 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.135e-13 Identity = 38/75 (50.67%), Postives = 48/75 (64.00%), Query Frame = -1 Query: 228 YLGGSGDPAYXXXXXXXXXXXGKDEQSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 452 Y GGS DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN Sbjct: 179 YPGGSFDPL----------GLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 243
BLAST of CX287073 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.483e-13 Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = -1 Query: 228 YLGGSGDPAYXXXXXXXXXXXGKDEQSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 452 Y GGS DP +D ++ + K+K +KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN Sbjct: 191 YPGGSFDPL----------GLAEDPEAFAELKVKHIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
BLAST of CX287073 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.483e-13 Identity = 38/75 (50.67%), Postives = 48/75 (64.00%), Query Frame = -1 Query: 228 YLGGSGDPAYXXXXXXXXXXXGKDEQSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 452 Y GGS DP +D + + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN Sbjct: 188 YPGGSFDPL----------GLAEDPERSAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
BLAST of CX287073 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 1.483e-13 Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = -1 Query: 228 YLGGSGDPAYXXXXXXXXXXXGKDEQSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 452 Y GG+ DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN Sbjct: 189 YPGGAFDPL----------GLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
BLAST of CX287073 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.937e-13 Identity = 49/112 (43.75%), Postives = 59/112 (52.68%), Query Frame = -1 Query: 216 LEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXGKDEQSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTS 551 +++ LMG AE R AN GS G L Y GG DP D + + K+KE+KNGRLAM + LG+FVQ +VTG GP QNL DHLADP N S Sbjct: 149 VQVVLMGLAEAYR----ANGGSEGFLDDLD-TLYPGGPFDPL----------GLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNKAFAS 245
BLAST of CX287073 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.937e-13 Identity = 45/111 (40.54%), Postives = 61/111 (54.95%), Query Frame = -1 Query: 222 VLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXGKDEQSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVL 554 V+E L + E RR+QD NPGS+ + F++Y G+ Y E K KE+ NGRLAMLA LG+ VQ VTG GP++NLL HL+DP +N ++ Sbjct: 144 VIEFILFHYVEIRRWQDIKNPGSVNQDPI--FKQYSLPKGEVGYPGGIFNPLNFAPTQEA-----KEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTIV 247 The following BLAST results are available for this feature:
BLAST of CX287073 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287073 ID=CX287073; Name=CX287073; organism=Citrus clementina; type=EST; length=554bpback to top |