CX287075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287075 vs. ExPASy Swiss-Prot
Match: CLPB_PROMA (Chaperone protein clpB OS=Prochlorococcus marinus GN=clpB PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 7.144e-44 Identity = 91/203 (44.83%), Postives = 142/203 (69.95%), Query Frame = 1 Query: 7 VDEAAAKLKMEITSKPTALDEINRSVLKLEMERLSLTNDTDKASKDRLNRLEAELSLLKERQAQLTEQWEHEKTVMTRIQSIKEEIDRVNLEIQQAEREYDLNRAAELKYG--SQLESAEKELNEYISSGKS------MLREEVTGSDIAEIVSKWTGIPVSKLQQSXXXXXXXXXXXXXXXVVGQDPAVKSVAEAIQRSRAG 591 +DE+A+KLKMEITSKP LDEI+R +++L+ME+LSL +++ AS+++LN ++ L+ LK +Q+ L +QW+ EK + + +KEEI++V L+I+QA+R+YDLNRAAEL+YG + L++ K+ + I + +LREEVT +DI E+++KWT IP++KL +S V+GQ AV++VA++IQRSR G Sbjct: 395 IDESASKLKMEITSKPEELDEIDRKIIQLQMEKLSLKRESNLASQEKLNAIDNGLNELKSKQSSLNKQWQEEKESINTLSFLKEEIEKVQLQIEQAKRDYDLNRAAELEYGTLNSLQNKLKQKEDLIMVNNNNDQKSLLLREEVTENDITEVIAKWTSIPLTKLLKSDIEKLLDLEDKLNSKVIGQKQAVQAVADSIQRSRTG 597
BLAST of CX287075 vs. ExPASy Swiss-Prot
Match: CLPB2_SYNE7 (Chaperone protein clpB 2 OS=Synechococcus elongatus (strain PCC 7942) GN=clpB2 PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 3.001e-42 Identity = 88/203 (43.35%), Postives = 141/203 (69.46%), Query Frame = 1 Query: 7 VDEAAAKLKMEITSKPTALDEINRSVLKLEMERLSLTNDTDKAS--KDRLNRLEAELSLLKERQAQLTEQWEHEKTVMTRIQSIKEEIDRVNLEIQQAEREYDLNRAAELKYG------SQLESAEKELNEYISSGKSMLREEVTGSDIAEIVSKWTGIPVSKLQQSXXXXXXXXXXXXXXXVVGQDPAVKSVAEAIQRSRAG 591 +DEA+A+LKMEITSKP+ L+++ R +L+LEME+LSL+ + +AS DRL +++ EL L+E+QA+L +QW+ EK ++ + ++EE + + ++ QAERE+DLN+ AELK+G Q ++ E+++ ++G+++LRE+V +DIAEIV++WT IPV +L +S V+GQD AV +VA AI+R+RAG Sbjct: 400 IDEASAQLKMEITSKPSELEDLERRLLQLEMEQLSLSGENGQASVHSDRLQQIQTELQTLQEQQARLNQQWQQEKQLLEELGRLQEEEETLRQQVNQAEREHDLNKGAELKFGQLEALQQQRQAIEEQIQALHANGQTLLREQVEEADIAEIVARWTNIPVQRLLESERQKLLQLESFLHQRVIGQDEAVVAVAAAIRRARAG 602
BLAST of CX287075 vs. ExPASy Swiss-Prot
Match: CLPB_DESVH (Chaperone protein clpB OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=clpB PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 6.686e-42 Identity = 97/201 (48.26%), Postives = 131/201 (65.17%), Query Frame = 1 Query: 7 VDEAAAKLKMEITSKPTALDEINRSVLKLEMERLSLTNDTDKASKDRLNRLEAELSLLKERQAQLTEQWEHEKTVMTRIQSIKEEIDRVNLEIQQAEREYDLNRAAELKYG------SQLESAEKELNEYISSGKSMLREEVTGSDIAEIVSKWTGIPVSKLQQSXXXXXXXXXXXXXXXVVGQDPAVKSVAEAIQRSRAG 591 +DEAAA ++ EI S P LDE NR +++LE+ER +L +TD AS++RL RLE EL+ L+ Q L QWE EK + ++SIKE+I+R I++AER YDLNRAAELKY QLESAEK ++ +L+EEV DIAEIV++WTGIPV++L +S VVGQ+ AV +V+EA+ R+RAG Sbjct: 399 IDEAAALIRTEIDSLPADLDEANRKIMQLEIEREALRRETDVASRERLERLENELADLRAEQTALLSQWEREKGSIDHVRSIKEDIERTRHAIEEAERAYDLNRAAELKYSRLLELERQLESAEKGGHD----ETRLLKEEVRPDDIAEIVARWTGIPVTRLLESEREKLLRLADVLHERVVGQEEAVDAVSEAVLRARAG 595
BLAST of CX287075 vs. ExPASy Swiss-Prot
Match: CLPB_PROMP (Chaperone protein clpB OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=clpB PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.490e-41 Identity = 89/202 (44.06%), Postives = 133/202 (65.84%), Query Frame = 1 Query: 7 VDEAAAKLKMEITSKPTALDEINRSVLKLEMERLSLTNDTDKASKDRLNRLEAELSLLKERQAQLTEQWEHEKTVMTRIQSIKEEIDRVNLEIQQAEREYDLNRAAELKYGSQLE-------SAEKELNEYISSGKSMLREEVTGSDIAEIVSKWTGIPVSKLQQSXXXXXXXXXXXXXXXVVGQDPAVKSVAEAIQRSRAG 591 +DEAA++L M ITSKP +DEI+R VL+LEME LSL ++D S +RL R+ EL LK RQ++L QW+ EK + I ++KEEI+ L+I+QA+R +DLN+AAEL++G+ + +E ++ + S K++LR+EV DIAE+VSKWT IPV+ L QS ++GQ+ A+ +V+++I+RSR G Sbjct: 392 IDEAASRLNMIITSKPEEIDEIDRKVLQLEMENLSLQRESDNFSLERLKRINNELHDLKIRQSELNHQWQKEKEEIDEISNLKEEIESTQLKIEQAKRSFDLNKAAELEFGTLISLQKKLKIKSENLVDSFKSGEKNLLRQEVNFDDIAEVVSKWTSIPVNNLNQSEKEKLLKLELTLKEKIIGQNNAICAVSDSIKRSRTG 593
BLAST of CX287075 vs. ExPASy Swiss-Prot
Match: CLPB_FUSNN (Chaperone protein clpB OS=Fusobacterium nucleatum subsp. nucleatum GN=clpB PE=3 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 4.334e-41 Identity = 95/201 (47.26%), Postives = 134/201 (66.67%), Query Frame = 1 Query: 7 VDEAAAKLKMEITSKPTALDEINRSVLKLEMERLSLTNDTDKASKDRLNRLEAELSLLKERQAQLTEQWEHEKTVMTRIQSIKEEIDRVNLEIQQAEREYDLNRAAELKYGSQLESAEKEL----NEYISSGK--SMLREEVTGSDIAEIVSKWTGIPVSKLQQSXXXXXXXXXXXXXXXVVGQDPAVKSVAEAIQRSRAG 591 +DEAAA ++ EI S P LD++ R L+LE+E +L +TD ASK+RL +E EL+ L E + LT +WE EK +++I++IK EI+ V LE+++AEREYDL + +ELKYG +L + EKEL N+ GK S+L++EVT +IA+IVS+WTGIPVSKL ++ V GQD A+KSVA+ + RS AG Sbjct: 392 IDEAAAMIRTEIDSMPEELDQLTRKALQLEIEIKALEKETDDASKERLKVIEKELAELNEEKKVLTSKWELEKEDISKIKNIKREIENVKLEMEKAEREYDLTKLSELKYG-KLATLEKELQEQQNKVDKDGKENSLLKQEVTADEIADIVSRWTGIPVSKLTETKKEKMLHLEDHIKERVKGQDEAIKSVADTMLRSVAG 591
BLAST of CX287075 vs. ExPASy Swiss-Prot
Match: CLPB_THET8 (Chaperone protein clpB OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=clpB PE=1 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 4.792e-40 Identity = 88/197 (44.67%), Postives = 130/197 (65.99%), Query Frame = 1 Query: 7 VDEAAAKLKMEITSKPTALDEINRSVLKLEMERLSLTNDTDKASKDRLNRLEAELSLLKERQAQLTEQWEHEKTVMTRIQSIKEEIDRVNLEIQQAEREYDLNRAAELKYGS--QLESAEKELNEYISSGKSMLREEVTGSDIAEIVSKWTGIPVSKLQQSXXXXXXXXXXXXXXXVVGQDPAVKSVAEAIQRSRAG 591 +DEAAA+L+M + S P +D + R L+LE+ER +L + D S++RL +EAE++ L E A+L +WE E+ ++ +++ + +D V EI+ AER+YDLNRAAEL+YG +LE+ + L+E + G +R EVT DIAEIVS+WTGIPVSKL + VVGQD A+++VA+AI+R+RAG Sbjct: 385 IDEAAARLRMALESAPEEIDALERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAEWEREREILRKLREAQHRLDEVRREIELAERQYDLNRAAELRYGELPKLEAEVEALSEKL-RGARFVRLEVTEEDIAEIVSRWTGIPVSKLLEGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARAG 580
BLAST of CX287075 vs. ExPASy Swiss-Prot
Match: CLPB_THET2 (Chaperone protein clpB OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=clpB PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 4.792e-40 Identity = 88/197 (44.67%), Postives = 130/197 (65.99%), Query Frame = 1 Query: 7 VDEAAAKLKMEITSKPTALDEINRSVLKLEMERLSLTNDTDKASKDRLNRLEAELSLLKERQAQLTEQWEHEKTVMTRIQSIKEEIDRVNLEIQQAEREYDLNRAAELKYGS--QLESAEKELNEYISSGKSMLREEVTGSDIAEIVSKWTGIPVSKLQQSXXXXXXXXXXXXXXXVVGQDPAVKSVAEAIQRSRAG 591 +DEAAA+L+M + S P +D + R L+LE+ER +L + D S++RL +EAE++ L E A+L +WE E+ ++ +++ + +D V EI+ AER+YDLNRAAEL+YG +LE+ + L+E + G +R EVT DIAEIVS+WTGIPVSKL + VVGQD A+++VA+AI+R+RAG Sbjct: 385 IDEAAARLRMALESAPEEIDALERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAEWEREREILRKLREAQHRLDEVRREIELAERQYDLNRAAELRYGELPKLEAEVEALSEKL-RGARFVRLEVTEEDIAEIVSRWTGIPVSKLLEGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARAG 580
BLAST of CX287075 vs. ExPASy Swiss-Prot
Match: CLPB1_SYNY3 (Chaperone protein clpB 1 OS=Synechocystis sp. (strain PCC 6803) GN=clpB1 PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.378e-39 Identity = 87/208 (41.83%), Postives = 137/208 (65.87%), Query Frame = 1 Query: 7 VDEAAAKLKMEITSKPTALDEINRSVLKLEMERLSLTND-------TDKASKDRLNRLEAELSLLKERQAQLTEQWEHEKTVMTRIQSIKEEIDRVNLEIQQAEREYDLNRAAELKYGS------QLESAEKELNEYISSGKSMLREEVTGSDIAEIVSKWTGIPVSKLQQSXXXXXXXXXXXXXXXVVGQDPAVKSVAEAIQRSRAG 591 VDEAAA+LKMEITSKP L++I+R +++L+ME+LSL + DK+SK+RL +++ E++ L+ +Q +L+ QW EK ++ I ++KE+ + L++++AER D +AA++KYG +E E +L E SG ++LRE+VT SDIAEIV+ WTGIP+++L ++ V+GQ AV +V+ AI+R+RAG Sbjct: 398 VDEAAARLKMEITSKPVELEDIDRRLMQLQMEKLSLEGEEKRPGLGADKSSKERLEKIQQEITELEGQQQELSGQWLSEKQMLEEINTLKEKEQELRLQVEKAERATDWEKAAKIKYGELEVLQHDIEEKESKLLEIQGSGNTLLREQVTESDIAEIVAGWTGIPMNRLMETERQKLLQLEGHLHQRVIGQKEAVAAVSAAIRRARAG 605
BLAST of CX287075 vs. ExPASy Swiss-Prot
Match: CLPB_MEIRU (Chaperone protein clpB OS=Meiothermus ruber GN=clpB PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 3.106e-39 Identity = 87/197 (44.16%), Postives = 128/197 (64.97%), Query Frame = 1 Query: 7 VDEAAAKLKMEITSKPTALDEINRSVLKLEMERLSLTNDTDKASKDRLNRLEAELSLLKERQAQLTEQWEHEKTVMTRIQSIKEEIDRVNLEIQQAEREYDLNRAAELKYGSQLESAEKELNEYIS--SGKSMLREEVTGSDIAEIVSKWTGIPVSKLQQSXXXXXXXXXXXXXXXVVGQDPAVKSVAEAIQRSRAG 591 VDEAAA+L+M + S P ++D +NR L+LE+ER +L +TD SK RL LE E++ L+E + +WE E+ +M ++++ ++ +D V +I+QAER YDLN+AA L+YG +L E+E+NE +G +R VT DIA IVS+WTGIPV+KL + VVGQD A+ +VA+AI+R+RAG Sbjct: 385 VDEAAARLRMALESSPESIDALNRRKLQLEIEREALKKETDAESKFRLGELEKEIADLEEEIRKQQAEWEAEREIMQKLRAAQQRLDEVRTQIEQAERAYDLNKAAPLRYG-ELPKLEQEVNELADRMAGAQFVRPMVTEEDIAAIVSRWTGIPVAKLMEGEREKLLRLEDELHKRVVGQDEAIVAVADAIRRARAG 580
BLAST of CX287075 vs. ExPASy Swiss-Prot
Match: CLPB_CLOTE (Chaperone protein clpB OS=Clostridium tetani GN=clpB PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 9.037e-39 Identity = 86/201 (42.79%), Postives = 133/201 (66.17%), Query Frame = 1 Query: 7 VDEAAAKLKMEITSKPTALDEINRSVLKLEMERLSLTNDTDKASKDRLNRLEAELSLLKERQAQLTEQWEHEKTVMTRIQSIKEEIDRVNLEIQQAEREYDLNRAAELKYG------SQLESAEKELNEYISSGKSMLREEVTGSDIAEIVSKWTGIPVSKLQQSXXXXXXXXXXXXXXXVVGQDPAVKSVAEAIQRSRAG 591 +DEA A ++ EI S PT LD I R + ++E+E+ +L + D SK+RL LE ELS LKE+ ++T ++E EK + ++++K+++D V ++++AEREYDLN+ AELKYG SQ+E EKE+ +S +ML+EEVT ++I++I+S WTGIPV+KL + V+GQD AV++V+ A+ R+RAG Sbjct: 398 IDEAGAMIRTEIDSLPTELDSIKRKIFQMEIEKEALAKEKDSRSKERLEDLEKELSNLKEKDKEMTAKYEKEKEQIINMRNLKQKLDEVKGQLEKAEREYDLNKVAELKYGIIPGIKSQIE--EKEILIKENSQGNMLKEEVTENEISKIISHWTGIPVTKLIEGEKDKLLRLEDELKSRVIGQDEAVEAVSNAVLRARAG 596 The following BLAST results are available for this feature:
BLAST of CX287075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 144
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287075 ID=CX287075; Name=CX287075; organism=Citrus clementina; type=EST; length=592bpback to top |