CX287075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287075 vs. ExPASy Swiss-Prot
Match: CLPB_STRMU (Chaperone protein clpB OS=Streptococcus mutans GN=clpB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.521e-13 Identity = 53/204 (25.98%), Postives = 101/204 (49.51%), Query Frame = 1 Query: 7 VDEAAAKLKMEITSKPTALDEINRSVLKLEMERLSLTNDTDKASKDRLNRLEAELSLLKERQAQLTEQWEHEKTVMTRIQSIKEEIDRVNLEIQQAEREYDLNRAAEL---------KYGSQLESAEKELNEYISSGKSMLREEVTGSDIAEIVSKWTGIPVSKLQQSXXXXXXXXXXXXXXXVVGQDPAVKSVAEAIQRSRAG 591 +DEA A ++ + P + +++ ++ ++ L LT D+D K +LN L L+E+++QL W+ E+ ++ ++Q ++ + + +QA + N+ A+ K ++ + EKE + + ++ VT DIA +V + TGI V + ++ +VGQD AV+ V++AI RSRAG Sbjct: 396 IDEACAAKRLASHAYPVQMTNLSQQLISEKIRLLRLT-DSDTDDKFKLNN---HLEQLEEQKSQLLANWQRERELLDQVQELRSHLTALE---EQANLALENNQVADYVRLEDEEIRKCHQKMTALEKERLD----SQKIINVTVTREDIAAVVERLTGIKVQGVMENERDRLLHLEELLHQKIVGQDQAVQKVSQAIIRSRAG 588
BLAST of CX287075 vs. ExPASy Swiss-Prot
Match: CLPC_BACSU (Negative regulator of genetic competence clpC/mecB OS=Bacillus subtilis GN=clpC PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.210e-12 Identity = 50/174 (28.74%), Postives = 85/174 (48.85%), Query Frame = 1 Query: 103 RLSLTNDTDKASKDRLNRLEAELSLLKERQAQLTEQWEHEK----TVMTRIQSIKEEIDRVNLEIQQAEREYDLNRAAELKYGSQLESAEKELNEYISSGKSMLRE-------EVTGSDIAEIVSKWTGIPVSKLQQSXXXXXXXXXXXXXXXVVGQDPAVKSVAEAIQRSRAG 591 R+S+T+D +A+ +R ++ L + + E + T ++ +++++D V E A + + +AA L+ E+ L E + K +E EVT DIA +VS WTG+PVSK+ Q+ V+GQD AV +VA+A++R+RAG Sbjct: 363 RVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLR------DTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVVSSWTGVPVSKIAQTETDKLLNMENILHSRVIGQDEAVVAVAKAVRRARAG 530
BLAST of CX287075 vs. ExPASy Swiss-Prot
Match: CLPB_OCEIH (Chaperone protein clpB OS=Oceanobacillus iheyensis GN=clpB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.740e-11 Identity = 42/129 (32.56%), Postives = 67/129 (51.94%), Query Frame = 1 Query: 226 TVMTRIQSIKEEIDRVNLEIQQAEREYDLNRAAELKYGSQLESAEKELNEYISSGKSMLRE-------EVTGSDIAEIVSKWTGIPVSKLQQSXXXXXXXXXXXXXXXVVGQDPAVKSVAEAIQRSRAG 591 TV ++ +++++D V E A + + +AA L+ +E+ E + + K+ +E EVT DIA +VS WTG+PVSKL + V+GQ AV +VA+AI+R+RAG Sbjct: 411 TVPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLR------DSEQRFREELETTKNQWKEKQGQTDSEVTMEDIAAVVSTWTGVPVSKLTKDETDRLLNMEKILHDRVIGQSEAVNAVAKAIRRARAG 533
BLAST of CX287075 vs. ExPASy Swiss-Prot
Match: CLPV1_PSEAE (Protein clpV1 OS=Pseudomonas aeruginosa GN=clpV1 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.578e-11 Identity = 48/204 (23.53%), Postives = 97/204 (47.55%), Query Frame = 1 Query: 7 VDEAAAKLKMEITSKPTALDEINRSVLKLEMERLSLTNDT--DKASKDRLNRLEAELSLLKERQAQLTEQWEHEKTVM-------TRIQSIKEEIDRVNLEIQQAEREYDLNRAAELKYGSQLESAEKELNEYISSGKSMLREEVTGSDIAEIVSKWTGIPVSKLQQSXXXXXXXXXXXXXXXVVGQDPAVKSVAEAIQRSRAG 591 +D A A+ + + + P +D+ R + LE E + ++ A+ +R E L+ +ER A L ++W EK ++ R+++ E +D + + + E D + L ++L + +L+ + + ++ V +A +V+ WTGIPV ++ ++ ++GQD A++ +A+ IQ SRAG Sbjct: 425 LDTACARTAISLHAVPAEVDDSRRRIEALETELAIIRRESAIGVATAERQRNAETLLAEERERLAALEQRWAEEKRLVDELLETRARLRAAAEAVDAGGVPLGEGEVRLDEEQRQALH--ARLAELQAQLSA-LQGEEPLILPTVDYQAVASVVADWTGIPVGRMARNEIETVLNLDRHLKKRIIGQDHALEMIAKRIQTSRAG 625 The following BLAST results are available for this feature:
BLAST of CX287075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 144
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287075 ID=CX287075; Name=CX287075; organism=Citrus clementina; type=EST; length=592bpback to top |