CX287077
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPC_ODOSI (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Odontella sinensis GN=clpC PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 6.708e-41 Identity = 84/157 (53.50%), Postives = 116/157 (73.89%), Query Frame = 1 Query: 1 FEKAGELRDREMDLKAQI-----SALVDKGKEMSKAETEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 F+ A +L D EM+++ I S L ++ +++ E + V E D+ +++ WTGIPV K+S ES RLL MEETLH+R+IGQ A+ ++S+AIRRARVGL+NP+RPIASFIF+GPTGVGK+EL KAL+ Y FG+E++MIRLDMSE+ME+H Sbjct: 446 FDIAKQLVDHEMEVRTHIRIMKQSILTNETLGLARKEIDT------VLEGDVAEVIAGWTGIPVNKISDSESKRLLTMEETLHERLIGQHHAIVSVSKAIRRARVGLRNPDRPIASFIFAGPTGVGKTELTKALSEYMFGNEDSMIRLDMSEYMEKH 596
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_THET8 (Chaperone protein clpB OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=clpB PE=1 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 2.549e-40 Identity = 88/151 (58.28%), Postives = 113/151 (74.83%), Query Frame = 1 Query: 7 KAGELRDREMD-LKAQISALVDKGKEMSKAETEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 +A ELR E+ L+A++ AL +K + AR V VTE DI IVS WTGIPV K+ E ++LL++EE LHKRV+GQDEA++A++ AIRRAR GLK+PNRPI SF+F GPTGVGK+ELAK LAA F +EEAMIR+DM+E+ME+H Sbjct: 488 RAAELRYGELPKLEAEVEALSEKLRG-------ARFVRLEVTEEDIAEIVSRWTGIPVSKLLEGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKH 631
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_THET2 (Chaperone protein clpB OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=clpB PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 2.549e-40 Identity = 88/151 (58.28%), Postives = 113/151 (74.83%), Query Frame = 1 Query: 7 KAGELRDREMD-LKAQISALVDKGKEMSKAETEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 +A ELR E+ L+A++ AL +K + AR V VTE DI IVS WTGIPV K+ E ++LL++EE LHKRV+GQDEA++A++ AIRRAR GLK+PNRPI SF+F GPTGVGK+ELAK LAA F +EEAMIR+DM+E+ME+H Sbjct: 488 RAAELRYGELPKLEAEVEALSEKLRG-------ARFVRLEVTEEDIAEIVSRWTGIPVSKLLEGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKH 631
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPC_STAHJ (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus haemolyticus (strain JCSC1435) GN=clpC PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 9.686e-40 Identity = 82/152 (53.95%), Postives = 109/152 (71.71%), Query Frame = 1 Query: 1 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 FE A LRD++ L+ Q ++ K T D +++ DI +++ WTGIP+ K++ ESDRLL +E+TLH RVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E+AMIR+DMSEFME+H Sbjct: 436 FENAANLRDKQTKLEKQYEDAKNEWK------TTQGDQSTSLSKEDIGEVIAGWTGIPLTKINETESDRLLNLEQTLHDRVIGQNDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEEDAMIRVDMSEFMEKH 581
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPC_STAES (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus epidermidis (strain ATCC 12228) GN=clpC PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 9.686e-40 Identity = 82/152 (53.95%), Postives = 110/152 (72.37%), Query Frame = 1 Query: 1 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 FE A LRD++ L+ Q D E A+ + ++E +I +++ WTGIP+ K++ ESDRLL +E+TLHKRVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++AMIR+DMSEFME+H Sbjct: 436 FENAANLRDKQSKLEKQYE---DAKNEWKNAQG---GLDTALSEENIAEVIAGWTGIPLTKINETESDRLLNLEDTLHKRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDDAMIRVDMSEFMEKH 581
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPC_STAEQ (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=clpC PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 9.686e-40 Identity = 82/152 (53.95%), Postives = 110/152 (72.37%), Query Frame = 1 Query: 1 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 FE A LRD++ L+ Q D E A+ + ++E +I +++ WTGIP+ K++ ESDRLL +E+TLHKRVIGQ++AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++AMIR+DMSEFME+H Sbjct: 436 FENAANLRDKQSKLEKQYE---DAKNEWKNAQG---GLDTALSEENIAEVIAGWTGIPLTKINETESDRLLNLEDTLHKRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDDAMIRVDMSEFMEKH 581
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPC_STAS1 (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=clpC PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 2.818e-39 Identity = 80/152 (52.63%), Postives = 106/152 (69.74%), Query Frame = 1 Query: 1 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 FE A LRD++ L+ Q K + + ++E DI +++ WTGIP+ K++ ESDRLL +E+TLH RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++AMIR+DMSEFME+H Sbjct: 436 FENAANLRDKQTKLEKQYEEANTNWKNTQNGDNTS------LSEEDIGEVIAGWTGIPLTKINETESDRLLNLEDTLHNRVIGQKDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDDAMIRVDMSEFMEKH 581
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_RHILO (Chaperone protein clpB OS=Rhizobium loti GN=clpB PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 2.818e-39 Identity = 83/152 (54.61%), Postives = 109/152 (71.71%), Query Frame = 1 Query: 1 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 F++AGEL +I L K KE + +A V VVT + HIVS WTGIPV+K+ E D+LL+ME+ + KRV+GQ EAV+A+S+A+RRAR GL++PNRPI SFIF GPTGVGK+EL KALA++ F + AM+R+DMSEFME+H Sbjct: 496 FQRAGELA------YGKIPELEKKLKEAEAQDGKAGMVEEVVTPDHVAHIVSRWTGIPVDKMLQGERDKLLRMEDEIGKRVVGQGEAVQAVSKAVRRARAGLQDPNRPIGSFIFLGPTGVGKTELTKALASFLFDDDSAMVRIDMSEFMEKH 641
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB1_THEEB (Chaperone protein clpB 1 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpB1 PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 2.818e-39 Identity = 79/140 (56.43%), Postives = 106/140 (75.71%), Query Frame = 1 Query: 61 LVDKGKEMSKAETEARDVG--------PVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 L + K++++AE + R++ VTE DI I+S WTGIPV K+ E+ +LL +EE LHKRV+GQDEAV A++ AI+R+R GL +PNRPIASFIF GPTGVGK+ELAKALAA+ F +EEA++R+DMSE+ME+H Sbjct: 507 LTELHKKLAEAEAKLREIQVGGRSLLRDEVTEADIAEIISKWTGIPVSKLVESEAQKLLHLEEELHKRVVGQDEAVSAVAEAIQRSRAGLADPNRPIASFIFLGPTGVGKTELAKALAAFMFDTEEALVRIDMSEYMEKH 646
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPC_STAAW (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain MW2) GN=clpC PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 6.278e-39 Identity = 78/152 (51.32%), Postives = 109/152 (71.71%), Query Frame = 1 Query: 1 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 FE A LRD++ L+ Q ++ K + + ++E DI +++ WTGIP+ K++ ES++LL +E+TLH+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++AMIR+DMSEFME+H Sbjct: 436 FENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKH 581 The following BLAST results are available for this feature:
BLAST of CX287077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287077 ID=CX287077; Name=CX287077; organism=Citrus clementina; type=EST; length=457bpback to top |