CX287077
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPA_ECOLI (ATP-dependent Clp protease ATP-binding subunit clpA OS=Escherichia coli (strain K12) GN=clpA PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 7.979e-18 Identity = 47/111 (42.34%), Postives = 72/111 (64.86%), Query Frame = 1 Query: 124 VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 V DI+ +V+ IP + VS + D L + + L V GQD+A++A++ AI+ AR GL + ++P+ SF+F+GPTGVGK+E+ L+ G E ++R DMSE+MERH Sbjct: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSK-ALGIE--LLRFDMSEYMERH 528
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPA_ECOL6 (ATP-dependent Clp protease ATP-binding subunit clpA OS=Escherichia coli O6 GN=clpA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 7.979e-18 Identity = 47/111 (42.34%), Postives = 72/111 (64.86%), Query Frame = 1 Query: 124 VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 V DI+ +V+ IP + VS + D L + + L V GQD+A++A++ AI+ AR GL + ++P+ SF+F+GPTGVGK+E+ L+ G E ++R DMSE+MERH Sbjct: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSK-ALGIE--LLRFDMSEYMERH 528
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPA_ECO57 (ATP-dependent Clp protease ATP-binding subunit clpA OS=Escherichia coli O157:H7 GN=clpA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 7.979e-18 Identity = 47/111 (42.34%), Postives = 72/111 (64.86%), Query Frame = 1 Query: 124 VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 V DI+ +V+ IP + VS + D L + + L V GQD+A++A++ AI+ AR GL + ++P+ SF+F+GPTGVGK+E+ L+ G E ++R DMSE+MERH Sbjct: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSK-ALGIE--LLRFDMSEYMERH 528
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_YEREN (Chaperone protein clpB OS=Yersinia enterocolitica GN=clpB PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.042e-17 Identity = 42/106 (39.62%), Postives = 69/106 (65.09%), Query Frame = 1 Query: 139 IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 I +IV+ WTGI V ++ D+ ++++ + L +RVIGQ A+ +S I AR G+ +P +P+ F+ GP+GVGK+E A A+A +G E+ +I ++MSE+ E H Sbjct: 557 IANIVADWTGIQVGQMLKDDIRAVMELPQRLEERVIGQPHALVQLSENIMTARAGMADPRKPLGVFMLVGPSGVGKTETALAIAESMYGGEQNLITINMSEYQESH 662
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_RAT (Caseinolytic peptidase B protein homolog OS=Rattus norvegicus GN=Clpb PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.009e-12 Identity = 37/88 (42.05%), Postives = 54/88 (61.36%), Query Frame = 1 Query: 196 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY-YFGSEEAMIRLDMSEFMERH 456 E R +E+ L + +IGQ+ A+ + AIRR G + P+ F+F G +G+GK+ELAK A Y + +++ IRLDMSEF ERH Sbjct: 302 EERRRFPLEQRLEQHIIGQESAIATVGAAIRRKENGWYDEEHPLV-FLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERH 388
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_MOUSE (Caseinolytic peptidase B protein homolog OS=Mus musculus GN=Clpb PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 6.542e-12 Identity = 37/88 (42.05%), Postives = 54/88 (61.36%), Query Frame = 1 Query: 196 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY-YFGSEEAMIRLDMSEFMERH 456 E R +E+ L + +IGQ+ A+ + AIRR G + P+ F+F G +G+GK+ELAK A Y + +++ IRLDMSEF ERH Sbjct: 302 EERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLV-FLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERH 388
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_HUMAN (Caseinolytic peptidase B protein homolog OS=Homo sapiens GN=CLPB PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 6.542e-12 Identity = 37/88 (42.05%), Postives = 54/88 (61.36%), Query Frame = 1 Query: 196 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY-YFGSEEAMIRLDMSEFMERH 456 E R +E+ L + +IGQ+ A+ + AIRR G + P+ F+F G +G+GK+ELAK A Y + +++ IRLDMSEF ERH Sbjct: 332 EERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLV-FLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERH 418
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_BOVIN (Caseinolytic peptidase B protein homolog OS=Bos taurus GN=CLPB PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 6.542e-12 Identity = 37/88 (42.05%), Postives = 54/88 (61.36%), Query Frame = 1 Query: 196 ESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY-YFGSEEAMIRLDMSEFMERH 456 E R +E+ L + +IGQ+ A+ + AIRR G + P+ F+F G +G+GK+ELAK A Y + +++ IRLDMSEF ERH Sbjct: 302 EERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLV-FLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERH 388
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: ADPR_RHOER (ATP-dependent protease ATP-binding subunit-like protein OS=Rhodococcus erythropolis PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.457e-11 Identity = 31/81 (38.27%), Postives = 50/81 (61.73%), Query Frame = 1 Query: 214 KMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 ++ + L +++GQ AV A+ RAI A VG +P RP+A+ + GPTGVGK+EL + +AA + + R+DM+ + H Sbjct: 35 RLSKALSSKIVGQQAAVDAVVRAISIAHVGATDPTRPLANILLVGPTGVGKTELVRRVAAELRSGPDDLCRIDMNALAQEH 115
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: AMIB_PSEAE (ATP-dependent protease ATP-binding subunit-like protein amiB OS=Pseudomonas aeruginosa GN=amiB PE=3 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 5.538e-11 Identity = 30/78 (38.46%), Postives = 47/78 (60.26%), Query Frame = 1 Query: 223 ETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 + L V+GQD A++A+ ++ R + +P RP+ S +F GPTGVGK+E+ +ALA G E R+DM+ + H Sbjct: 55 DCLRAEVLGQDPALQAVEDMLKVVRADIADPRRPLFSALFLGPTGVGKTEIVRALARALHGDAEGFCRVDMNTLSQEH 132 The following BLAST results are available for this feature:
BLAST of CX287077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287077 ID=CX287077; Name=CX287077; organism=Citrus clementina; type=EST; length=457bpback to top |