CX287077
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_RHIME (Chaperone protein clpB OS=Rhizobium meliloti GN=clpB PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.309e-36 Identity = 80/157 (50.96%), Postives = 111/157 (70.70%), Query Frame = 1 Query: 1 FEKAGELRDREMDLKAQISALVDKGKEMSKAETE-ARDVGPVVTEV----DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 F++AGEL + + KE+++AE++ P+V EV +I HIVS WTGIPV+K+ E D+LL+ME+ L K V+GQ +AV+A+SRA+RR+R GL++PNRPI SFIF GPTGVGK+EL KALA + F E A++R+DMSE+ME+H Sbjct: 496 FQRAGELA---------YGVIPNLEKELAEAESQDGASANPMVQEVVTPDNIAHIVSRWTGIPVDKMLEGERDKLLRMEDELAKWVVGQGDAVQAVSRAVRRSRAGLQDPNRPIGSFIFLGPTGVGKTELTKALARFLFDDETALMRIDMSEYMEKH 643
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_BRAJA (Chaperone protein clpB OS=Bradyrhizobium japonicum GN=clpB PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 1.710e-36 Identity = 82/156 (52.56%), Postives = 109/156 (69.87%), Query Frame = 1 Query: 1 FEKAGEL---RDREMDLK-AQISALVDKGKEMSKAETEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 F+KAGEL R E++ + A I A + G+ M +A VT I +VS WTG+PV+K+ E D+LLKME++L KRV+GQ EAV A++ A+RR+R GL++PNRP+ SF+F GPTGVGK+EL KALA Y F E AM+RLDMSE+ME+H Sbjct: 497 FQKAGELAYGRIPELERQLADIEAKENSGEMMEEA----------VTANHIAQVVSRWTGVPVDKMLEGEKDKLLKMEDSLGKRVVGQAEAVHAVATAVRRSRAGLQDPNRPMGSFMFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKH 642
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB1_ANASP (Chaperone protein clpB 1 OS=Anabaena sp. (strain PCC 7120) GN=clpB1 PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 1.710e-36 Identity = 78/150 (52.00%), Postives = 109/150 (72.67%), Query Frame = 1 Query: 7 KAGELRDREMDLKAQISALVDKGKEMSKAETEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 K G+L + D +A+ + L++ S+ T R+ VTE DI IV+ WTGIPV ++ E +LL++E LH+RVIGQ EAV+A+S AIRRAR G+K+PNRPI SF+F GPTGVGK+ELA+ALA + F +++A++RLDMSE+ME+H Sbjct: 507 KYGKLEGVQRDREAKEAKLLEL---QSQGSTLLREQ---VTEADIAEIVAKWTGIPVNRLLESERQKLLQLESHLHQRVIGQQEAVEAVSAAIRRARAGMKDPNRPIGSFLFMGPTGVGKTELARALAQFLFDADDALVRLDMSEYMEKH 650
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_AGRT5 (Chaperone protein clpB OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=clpB PE=3 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 2.233e-36 Identity = 77/152 (50.66%), Postives = 106/152 (69.74%), Query Frame = 1 Query: 22 RDREMDLKAQISALVDKGKEMSKAETEARD-------VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 R+ + +++ + G E A EARD V VVT +I H+VS WTGIPV+K+ + ++LL+ME+ L K V+GQ EAV+A+S+A+RR+R GL++PNRPI SFIF GPTGVGK+EL K+LA + F E AM+RLDMSE+ME+H Sbjct: 492 RNGQFQRAGELTYGIIPGLEKELAAAEARDSSGAGSMVQEVVTPDNIAHVVSRWTGIPVDKMLEGQREKLLRMEDELAKSVVGQGEAVQAVSKAVRRSRAGLQDPNRPIGSFIFLGPTGVGKTELTKSLARFLFDDETAMVRLDMSEYMEKH 643
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_PSEPK (Chaperone protein clpB OS=Pseudomonas putida (strain KT2440) GN=clpB PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 3.809e-36 Identity = 71/111 (63.96%), Postives = 89/111 (80.18%), Query Frame = 1 Query: 124 VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 VTE +I +VS WTGIPV K+ E ++LLKMEE LH+RVIGQ EAV A++ A+RR+R GL +PNRP SF+F GPTGVGK+EL KALA + F +EEAM+R+DMSEFME+H Sbjct: 531 VTEEEIAEVVSKWTGIPVAKMLEGEREKLLKMEELLHQRVIGQSEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKH 641
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_PSEAE (Chaperone protein clpB OS=Pseudomonas aeruginosa GN=clpB PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 3.809e-36 Identity = 77/155 (49.68%), Postives = 105/155 (67.74%), Query Frame = 1 Query: 4 EKAGELRDREMDLKAQISALVDKGKEMSKAE----TEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 E A D E + Q + D + + + TE + + VT+ +I +VS WTGIPV K+ E ++LL+ME+ LH+RVIGQDEAV A+S A+RR+R GL +PNRP SF+F GPTGVGK+EL KALA + F +EEA++R+DMSEFME+H Sbjct: 487 EAARRKGDLESMARIQYQTIPDLERSLQMVDQHGKTENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGEREKLLRMEQELHRRVIGQDEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEALVRIDMSEFMEKH 641
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_COXBU (Chaperone protein clpB OS=Coxiella burnetii GN=clpB PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 4.975e-36 Identity = 81/154 (52.60%), Postives = 108/154 (70.13%), Query Frame = 1 Query: 7 KAGELRDREMDLKAQISALVDKG-KEMSKAETEARD---VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 +AG+L R +L+ I +DK K S+ E + D + VTE ++ +VS WT IPV K+ E ++LL ME LHKRVIGQDEAV A++ AIRR+R GL +PNRP+ SF+F GPTGVGK+EL KALA + F +E+AM+R+DMSEFME+H Sbjct: 491 RAGDLA-RMSELQYGIIPELDKKLKAASQKEEQFHDHKLLRSRVTEEEVAEVVSKWTHIPVSKMLEGEREKLLHMETELHKRVIGQDEAVNAVANAIRRSRAGLSDPNRPVGSFLFLGPTGVGKTELCKALAVFLFDTEDAMVRIDMSEFMEKH 643
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB1_SYNY3 (Chaperone protein clpB 1 OS=Synechocystis sp. (strain PCC 6803) GN=clpB1 PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 6.497e-36 Identity = 79/150 (52.67%), Postives = 106/150 (70.67%), Query Frame = 1 Query: 7 KAGELRDREMDLKAQISALVDKGKEMSKAETEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 K GEL + D++ + S L++ T R+ VTE DI IV+ WTGIP+ ++ E +LL++E LH+RVIGQ EAV A+S AIRRAR G+K+P+RPI SF+F GPTGVGK+ELA+ALA + F SEEAM+R+DMSE+ME+H Sbjct: 513 KYGELEVLQHDIEEKESKLLEI---QGSGNTLLREQ---VTESDIAEIVAGWTGIPMNRLMETERQKLLQLEGHLHQRVIGQKEAVAAVSAAIRRARAGMKDPSRPIGSFLFMGPTGVGKTELARALAGFLFDSEEAMVRIDMSEYMEKH 656
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: ERD1_ARATH (ERD1 protein, chloroplastic OS=Arabidopsis thaliana GN=ERD1 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 8.485e-36 Identity = 75/127 (59.06%), Postives = 97/127 (76.38%), Query Frame = 1 Query: 79 EMSKAETEARDVGPV-VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 E S A D P+ V DI + S W+GIPV++++ DE L+ +E+ L RV+GQDEAV AISRA++R+RVGLK+P+RPIA+ +F GPTGVGK+EL KALAA YFGSEE+M+RLDMSE+MERH Sbjct: 574 EESSLPPAAGDDEPILVGPDDIAAVASVWSGIPVQQITADERMLLMSLEDQLRGRVVGQDEAVAAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELTKALAANYFGSEESMLRLDMSEYMERH 700
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_HAEIN (Chaperone protein clpB OS=Haemophilus influenzae GN=clpB PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 8.485e-36 Identity = 78/155 (50.32%), Postives = 109/155 (70.32%), Query Frame = 1 Query: 4 EKAGELRDREMDLKAQISALVDKGKEMSKAET-EARDVGPV---VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 E+A D + Q + D K++ +AET E +++ + VT+ +I ++S TGIPV K+ E ++LL+ME+ LHKRVIGQ+EAV A++ AIRR+R GL +PNRPI SF+F GPTGVGK+EL K LA + F SE+AM+R+DMSEFME+H Sbjct: 487 EQARRAGDLAKMSELQYGRIPDLEKQLEQAETSEGKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEDELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDAMVRIDMSEFMEKH 641 The following BLAST results are available for this feature:
BLAST of CX287077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287077 ID=CX287077; Name=CX287077; organism=Citrus clementina; type=EST; length=457bpback to top |