CX287077
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB2_STRAW (Chaperone protein clpB 2 OS=Streptomyces avermitilis GN=clpB2 PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 8.485e-36 Identity = 80/151 (52.98%), Postives = 110/151 (72.85%), Query Frame = 1 Query: 7 KAGELR-DREMDLKAQISALVDKGKEMSKAETEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 +A ELR R DL+ +++A + ++++ + E R + VVTE +I IV+AWTGIPV ++ E ++LL+++E L +RVIGQDEAVK ++ AI RAR G+++P RPI SFIF GPTGVGK+ELAK LA F SEE M+RLDMSE+ ERH Sbjct: 502 RAAELRYGRLQDLERRLAA---EEEQLAAKQGENRLLREVVTEEEIAEIVAAWTGIPVARLQEGEREKLLRLDEILRERVIGQDEAVKLVTDAIIRARSGIRDPRRPIGSFIFLGPTGVGKTELAKTLARTLFDSEENMVRLDMSEYQERH 649
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_XANCP (Chaperone protein clpB OS=Xanthomonas campestris pv. campestris GN=clpB PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.108e-35 Identity = 81/155 (52.26%), Postives = 103/155 (66.45%), Query Frame = 1 Query: 4 EKAGELRDREMDLKAQISALVDKGKEMSKA-ETEARDVGPV---VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 E A +D + Q L K+M A E E D V VT +I +VS WTGIPV K+ E D+LL+ME+ LH+RV+GQ+EA+K +S A+RR+R GL +PNRP SF+F GPTGVGK+EL KALA + F S EAMIR+DMSEFME+H Sbjct: 487 EAAQRRQDYAKMSEIQYGVLPQLEKQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGERDKLLRMEDELHRRVVGQEEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALADFLFDSTEAMIRIDMSEFMEKH 641
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_STAAW (Chaperone protein clpB OS=Staphylococcus aureus (strain MW2) GN=clpB PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.108e-35 Identity = 79/152 (51.97%), Postives = 109/152 (71.71%), Query Frame = 1 Query: 4 EKAGELRDREM-DLKAQISALVDKGKEMSKAETEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 EKA EL+ + L+ ++ L D ++ +T+ R + VVT+ +I IVS WTGIPV K+ E ++LL + + LHKRV+GQD+AV +S A+ RAR G+K+PNRPI SF+F GPTGVGK+ELAK+LAA F SE+ MIR+DMSE+ME+H Sbjct: 495 EKAAELQYGTIPQLEKELRELEDNFQDEQGEDTD-RMIREVVTDEEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKH 645
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_STAAS (Chaperone protein clpB OS=Staphylococcus aureus (strain MSSA476) GN=clpB PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.108e-35 Identity = 79/152 (51.97%), Postives = 109/152 (71.71%), Query Frame = 1 Query: 4 EKAGELRDREM-DLKAQISALVDKGKEMSKAETEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 EKA EL+ + L+ ++ L D ++ +T+ R + VVT+ +I IVS WTGIPV K+ E ++LL + + LHKRV+GQD+AV +S A+ RAR G+K+PNRPI SF+F GPTGVGK+ELAK+LAA F SE+ MIR+DMSE+ME+H Sbjct: 495 EKAAELQYGTIPQLEKELRELEDNFQDEQGEDTD-RMIREVVTDEEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKH 645
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_STAAN (Chaperone protein clpB OS=Staphylococcus aureus (strain N315) GN=clpB PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.108e-35 Identity = 79/152 (51.97%), Postives = 109/152 (71.71%), Query Frame = 1 Query: 4 EKAGELRDREM-DLKAQISALVDKGKEMSKAETEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 EKA EL+ + L+ ++ L D ++ +T+ R + VVT+ +I IVS WTGIPV K+ E ++LL + + LHKRV+GQD+AV +S A+ RAR G+K+PNRPI SF+F GPTGVGK+ELAK+LAA F SE+ MIR+DMSE+ME+H Sbjct: 495 EKAAELQYGTIPQLEKELRELEDNFQDEQGEDTD-RMIREVVTDEEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKH 645
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_STAAM (Chaperone protein clpB OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=clpB PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.108e-35 Identity = 79/152 (51.97%), Postives = 109/152 (71.71%), Query Frame = 1 Query: 4 EKAGELRDREM-DLKAQISALVDKGKEMSKAETEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 EKA EL+ + L+ ++ L D ++ +T+ R + VVT+ +I IVS WTGIPV K+ E ++LL + + LHKRV+GQD+AV +S A+ RAR G+K+PNRPI SF+F GPTGVGK+ELAK+LAA F SE+ MIR+DMSE+ME+H Sbjct: 495 EKAAELQYGTIPQLEKELRELEDNFQDEQGEDTD-RMIREVVTDEEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKH 645
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_STAAC (Chaperone protein clpB OS=Staphylococcus aureus (strain COL) GN=clpB PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.108e-35 Identity = 79/152 (51.97%), Postives = 109/152 (71.71%), Query Frame = 1 Query: 4 EKAGELRDREM-DLKAQISALVDKGKEMSKAETEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 EKA EL+ + L+ ++ L D ++ +T+ R + VVT+ +I IVS WTGIPV K+ E ++LL + + LHKRV+GQD+AV +S A+ RAR G+K+PNRPI SF+F GPTGVGK+ELAK+LAA F SE+ MIR+DMSE+ME+H Sbjct: 495 EKAAELQYGTIPQLEKELRELEDNFQDEQGEDTD-RMIREVVTDEEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKH 645
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_RHOPA (Chaperone protein clpB OS=Rhodopseudomonas palustris GN=clpB PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.108e-35 Identity = 78/152 (51.32%), Postives = 102/152 (67.11%), Query Frame = 1 Query: 1 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 +++AGEL +I L K E+ E V VT I +VS WTG+PV+K+ E ++LL+MEE L +RV+GQ EAV A+S A+RRAR GL++PNRP+ SF+F GPTGVGK+EL KALA Y F E AM+R+DMSEFME+H Sbjct: 497 YQRAGELA------YGRIPELEKKIAEIEANENSGAMVEEAVTANHIAQVVSRWTGVPVDKMLEGEKEKLLRMEEQLGQRVVGQFEAVHAVSTAVRRARAGLQDPNRPMGSFMFLGPTGVGKTELTKALAEYLFDDETAMVRIDMSEFMEKH 642
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_XANAC (Chaperone protein clpB OS=Xanthomonas axonopodis pv. citri GN=clpB PE=3 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 1.447e-35 Identity = 81/155 (52.26%), Postives = 103/155 (66.45%), Query Frame = 1 Query: 4 EKAGELRDREMDLKAQISALVDKGKEMSKA-ETEARDVGPV---VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 E A +D + Q L K+M+ A E E D V VT +I +VS WTGIPV K+ E D+LL+ME+ LH RV+GQ+EA+K +S A+RR+R GL +PNRP SF+F GPTGVGK+EL KALA + F S EAMIR+DMSEFME+H Sbjct: 487 EAAQRRQDYAKMSEIQYGVLPQLEKQMALANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALADFLFDSTEAMIRIDMSEFMEKH 641
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_STAAR (Chaperone protein clpB OS=Staphylococcus aureus (strain MRSA252) GN=clpB PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.447e-35 Identity = 79/152 (51.97%), Postives = 108/152 (71.05%), Query Frame = 1 Query: 4 EKAGELRDREM-DLKAQISALVDKGKEMSKAETEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 EKA EL+ + L+ ++ L D ++ + E R + VVT+ +I IVS WTGIPV K+ E ++LL + + LHKRV+GQD+AV +S A+ RAR G+K+PNRPI SF+F GPTGVGK+ELAK+LAA F SE+ MIR+DMSE+ME+H Sbjct: 495 EKAAELQYGTIPQLEKELRELEDNFQD-EQGEDSDRMIREVVTDEEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKH 645 The following BLAST results are available for this feature:
BLAST of CX287077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287077 ID=CX287077; Name=CX287077; organism=Citrus clementina; type=EST; length=457bpback to top |