CX287077
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_SALTY (Chaperone protein clpB OS=Salmonella typhimurium GN=clpB PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.447e-35 Identity = 75/148 (50.68%), Postives = 105/148 (70.95%), Query Frame = 1 Query: 13 GELRDREMDLKAQISALVDKGKEMSKAETEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 G++ + E L+A A +GK M + VT+ +I +++ WTGIPV ++ E ++LL+ME+ LH RVIGQ+EAV+A+S AIRR+R GL +PNRPI SF+F GPTGVGK+EL KALA + F S++AM+R+DMSEFME+H Sbjct: 504 GKIPELEKQLEA---ATQSEGKTMRLLRNK-------VTDAEIAEVLARWTGIPVSRMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKH 641
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_SALTI (Chaperone protein clpB OS=Salmonella typhi GN=clpB PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.447e-35 Identity = 75/148 (50.68%), Postives = 105/148 (70.95%), Query Frame = 1 Query: 13 GELRDREMDLKAQISALVDKGKEMSKAETEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 G++ + E L+A A +GK M + VT+ +I +++ WTGIPV ++ E ++LL+ME+ LH RVIGQ+EAV+A+S AIRR+R GL +PNRPI SF+F GPTGVGK+EL KALA + F S++AM+R+DMSEFME+H Sbjct: 504 GKIPELEKQLEA---ATQSEGKTMRLLRNK-------VTDAEIAEVLARWTGIPVSRMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKH 641
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_SHIFL (Chaperone protein clpB OS=Shigella flexneri GN=clpB PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 1.890e-35 Identity = 68/111 (61.26%), Postives = 90/111 (81.08%), Query Frame = 1 Query: 124 VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 VT+ +I +++ WTGIPV ++ E ++LL+ME+ LH RVIGQ+EAV A+S AIRR+R GL +PNRPI SF+F GPTGVGK+EL KALA + F S+EAM+R+DMSEFME+H Sbjct: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKH 641
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_RHOBA (Chaperone protein clpB OS=Rhodopirellula baltica GN=clpB PE=3 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 1.890e-35 Identity = 77/148 (52.03%), Postives = 101/148 (68.24%), Query Frame = 1 Query: 22 RDREMDLKAQISALVDKGKEMSKAET---EARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 R RE+ + + D + +K E + R + VTE +I +VS WTG+PV ++ E +LL MEE LH+RV+GQDEAV A+S A+RR+R GL++PNRPI SF+F GPTGVGK+EL KALA F E AM+R+DMSEFMERH Sbjct: 517 RLRELQARIDEAEKHDDSADQTKEEPGDEKRRLLRKEVTEEEIAEVVSTWTGVPVTRMMETERAKLLVMEERLHQRVVGQDEAVTAVSDAVRRSRSGLQDPNRPIGSFLFLGPTGVGKTELCKALAEVMFDDESAMVRIDMSEFMERH 664
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_PSESM (Chaperone protein clpB OS=Pseudomonas syringae pv. tomato GN=clpB PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 1.890e-35 Identity = 70/111 (63.06%), Postives = 88/111 (79.28%), Query Frame = 1 Query: 124 VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 VTE +I +VS WTGIPV K+ E ++LL+ME LH RVIGQ+EAV A+S A+RR+R GL +PNRP SF+F GPTGVGK+EL KALA + F +EEAM+R+DMSEFME+H Sbjct: 531 VTEEEIAEVVSKWTGIPVSKMLEGEREKLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKH 641
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_ECOLI (Chaperone protein clpB OS=Escherichia coli (strain K12) GN=clpB PE=1 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 1.890e-35 Identity = 68/111 (61.26%), Postives = 90/111 (81.08%), Query Frame = 1 Query: 124 VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 VT+ +I +++ WTGIPV ++ E ++LL+ME+ LH RVIGQ+EAV A+S AIRR+R GL +PNRPI SF+F GPTGVGK+EL KALA + F S+EAM+R+DMSEFME+H Sbjct: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKH 641
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_ECOL6 (Chaperone protein clpB OS=Escherichia coli O6 GN=clpB PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 1.890e-35 Identity = 68/111 (61.26%), Postives = 90/111 (81.08%), Query Frame = 1 Query: 124 VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 VT+ +I +++ WTGIPV ++ E ++LL+ME+ LH RVIGQ+EAV A+S AIRR+R GL +PNRPI SF+F GPTGVGK+EL KALA + F S+EAM+R+DMSEFME+H Sbjct: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKH 641
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_ECO57 (Chaperone protein clpB OS=Escherichia coli O157:H7 GN=clpB PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 1.890e-35 Identity = 68/111 (61.26%), Postives = 90/111 (81.08%), Query Frame = 1 Query: 124 VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 VT+ +I +++ WTGIPV ++ E ++LL+ME+ LH RVIGQ+EAV A+S AIRR+R GL +PNRPI SF+F GPTGVGK+EL KALA + F S+EAM+R+DMSEFME+H Sbjct: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKH 641
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_DEIRA (Chaperone protein clpB OS=Deinococcus radiodurans GN=clpB PE=3 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 3.224e-35 Identity = 73/136 (53.68%), Postives = 97/136 (71.32%), Query Frame = 1 Query: 49 QISALVDKGKEMSKAETEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 ++ AL +++ K A VTE DI +VS WTGIPV K+ E ++LL +EE LH RVIGQD A+ ++S AIRRAR GL +PNRP+ SF+F GP+GVGK+ELAKALA + F S +AM+R+DMSE+ME+H Sbjct: 496 ELPALEKDVQDLEKKLKSAEFAHMEVTEEDIAAVVSRWTGIPVSKLMEGEREKLLHLEEQLHGRVIGQDRAIVSVSDAIRRARAGLNDPNRPLGSFMFLGPSGVGKTELAKALAEFLFDSSDAMVRIDMSEYMEKH 631
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_BRUSU (Chaperone protein clpB OS=Brucella suis GN=clpB PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 3.224e-35 Identity = 75/155 (48.39%), Postives = 107/155 (69.03%), Query Frame = 1 Query: 1 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEARD---VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 F+KAGEL + K+++ AE++ + VT + ++S WTGIPV+++ E ++LL+ME+ + KRV+GQ EAV+AIS+A+RRAR GL++PNRPI SFIF GPTGVGK+EL KALA++ F + AM+R+DMSEFME+H Sbjct: 496 FQKAGELA---------YGTIPQLEKQLADAESQENKGSLLEETVTPDHVAQVISRWTGIPVDRMLEGEREKLLRMEDEIGKRVVGQGEAVQAISKAVRRARAGLQDPNRPIGSFIFLGPTGVGKTELTKALASFLFQDDTAMVRIDMSEFMEKH 641 The following BLAST results are available for this feature:
BLAST of CX287077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287077 ID=CX287077; Name=CX287077; organism=Citrus clementina; type=EST; length=457bpback to top |