CX287077
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_BRUME (Chaperone protein clpB OS=Brucella melitensis GN=clpB PE=3 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 3.224e-35 Identity = 75/155 (48.39%), Postives = 107/155 (69.03%), Query Frame = 1 Query: 1 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEARD---VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 F+KAGEL + K+++ AE++ + VT + ++S WTGIPV+++ E ++LL+ME+ + KRV+GQ EAV+AIS+A+RRAR GL++PNRPI SFIF GPTGVGK+EL KALA++ F + AM+R+DMSEFME+H Sbjct: 496 FQKAGELA---------YGTIPQLEKQLADAESQENKGSLLEETVTPDHVAQVISRWTGIPVDRMLEGEREKLLRMEDEIGKRVVGQGEAVQAISKAVRRARAGLQDPNRPIGSFIFLGPTGVGKTELTKALASFLFQDDTAMVRIDMSEFMEKH 641
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_LISIN (Chaperone protein clpB OS=Listeria innocua GN=clpB PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 5.500e-35 Identity = 79/151 (52.32%), Postives = 107/151 (70.86%), Query Frame = 1 Query: 7 KAGELRDREMD-LKAQISALVDKGKEMSKAETEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 KA ELR ++ ++ ++ AL + +E K E R + VTE +I IV WTGIPV K+ E ++LLK+ + LH++VIGQD+AV+ +S A+ RAR G+K+P RPI SFIF GPTGVGK+ELAKALA F SE+ MIR+DMSE+ME+H Sbjct: 499 KAAELRHGKIPAVEKELLALETENRE--KTAQEDRILQEEVTENEIAEIVGRWTGIPVTKLVEGEREKLLKLADVLHQKVIGQDDAVQLVSDAVLRARAGIKDPKRPIGSFIFLGPTGVGKTELAKALAYNMFDSEDHMIRIDMSEYMEKH 647
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_PROFR (Chaperone protein clpB (Fragment) OS=Propionibacterium freudenreichii subsp. shermanii GN=clpB PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.600e-34 Identity = 76/151 (50.33%), Postives = 102/151 (67.55%), Query Frame = 1 Query: 13 GELRDREMDLKAQISALVDKGKEMSKAETEARD---VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 G+L L +I L + E S AE +++ V VT DI +VSAWTG+PV K+ ES++LL ME + KR++GQ AVKA+S A+RR+R G+ +PNRP SF+F GPTGVGK+ELAKALA + F E AM+R+DMSE+ME+H Sbjct: 494 GDLAKASEILYGEIPELNKQLDEASAAEEDSQGKSMVSEEVTSDDIAEVVSAWTGVPVGKMLEGESEKLLDMENRIGKRLVGQQAAVKAVSDAVRRSRAGISDPNRPTGSFMFLGPTGVGKTELAKALADFLFDDETAMVRIDMSEYMEKH 644
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_XYLFT (Chaperone protein clpB OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=clpB PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 2.090e-34 Identity = 67/111 (60.36%), Postives = 87/111 (78.38%), Query Frame = 1 Query: 124 VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 VT +I +VS WTGIPV K+ E D+LL+ME L +RV+GQDEA+K +S A+RR+R GL +PNRP SF+F GPTGVGK+EL KALA + F S++AM+R+DMSEFME+H Sbjct: 531 VTAEEIAEVVSRWTGIPVSKMLEGERDKLLRMEADLGRRVVGQDEAIKVVSDAVRRSRTGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDSQDAMVRIDMSEFMEKH 641
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_PROMM (Chaperone protein clpB OS=Prochlorococcus marinus (strain MIT 9313) GN=clpB PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 2.090e-34 Identity = 75/160 (46.88%), Postives = 106/160 (66.25%), Query Frame = 1 Query: 4 EKAGELRDREMDLKAQISALVDKGKEMSKAETEARDVGPV---------VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 E+A D + + L K++S+ ET G VTE DI +++ WTGIPV K+ E ++LL +E LH+RVIGQ++AV+A++ AI+R+R GL +PNRPIASF+F GPTGVGK+EL+KALA+ F SE A++R+DMSE+ME+H Sbjct: 488 EQAKRSYDLNKAAELEYGTLAGLQKQLSEKETALAQDGEAGDKSLLREEVTEDDIADVIAKWTGIPVAKLVQSEMEKLLGLEAELHQRVIGQEQAVQAVADAIQRSRAGLSDPNRPIASFLFLGPTGVGKTELSKALASQLFDSEAALVRIDMSEYMEKH 647
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB2_THEEB (Chaperone protein clpB 2 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpB2 PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 2.090e-34 Identity = 75/150 (50.00%), Postives = 104/150 (69.33%), Query Frame = 1 Query: 7 KAGELRDREMDLKAQISALVDKGKEMSKAETEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 K G L + +L+A + L++ + T RD VTE DI IV+ WTGIP++K+ E +LL++E+ LH+RVIGQ +AV A++ AIRRAR G+K+P RPI SF+F GPTGVGK+ELA+ALA F E A++R+DMSE+ME+H Sbjct: 512 KYGRLETLQRELEATEAQLLEL---QAAGGTFLRDQ---VTEADIAEIVAKWTGIPLQKLMASERQKLLQLEQVLHQRVIGQSDAVAAVAAAIRRARAGMKDPARPIGSFLFMGPTGVGKTELARALAEALFDDENALVRIDMSEYMEKH 655
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: HLYB_TREHY (Hemolysin B OS=Treponema hyodysenteriae GN=tlyB PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.730e-34 Identity = 71/151 (47.02%), Postives = 102/151 (67.55%), Query Frame = 1 Query: 1 FEKAGELRDREMDLKAQISALVDKGKEMSKAETEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMER 453 FE A ++RD L+ ++S K+ K E + + E DI+H++S T IP++++ ES RL+ MEE LH++V+GQ EA+ +IS+AIRR+R GLK RP+ SFIF GPTGVGK+ LAK L+ + FG +A+IR+DMSEFME+ Sbjct: 445 FEDAAKIRDEITSLQEELS------KKEEKCREEREKIETFIEEDDIRHVISEITNIPIKRLLNSESKRLIGMEEELHQKVVGQKEAISSISKAIRRSRAGLKTSKRPLGSFIFLGPTGVGKTALAKVLSEFMFGDSDALIRIDMSEFMEK 589
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_STAEQ (Chaperone protein clpB OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=clpB PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.730e-34 Identity = 78/154 (50.65%), Postives = 107/154 (69.48%), Query Frame = 1 Query: 4 EKAGELRDREMDLKAQISALVDKGKEMSKAET---EARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 EKA EL+ + Q+ + K +E + ET R + VV++ +I IVS WTGIPV K+ E ++LL + + LHKRV+GQD+AV +S A+ RAR G+K+PNRPI SF+F GPTGVGK+ELAK+LA+ F SE+ MIR+DMSE+ME+H Sbjct: 495 EKAAELQYGTIP---QLEKELQKFEEAFQDETGEDSERMIREVVSDEEIGDIVSQWTGIPVSKLVETEREKLLSLSDILHKRVVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLASSLFDSEKHMIRIDMSEYMEKH 645
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_PHOPR (Chaperone protein clpB OS=Photobacterium profundum GN=clpB PE=3 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 2.730e-34 Identity = 74/144 (51.39%), Postives = 103/144 (71.53%), Query Frame = 1 Query: 25 DREMDLKAQISALVDKGKEMSKAETEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 ++++DL AQ +EMS + + VT+ +I ++S TGIPV K+ E D+LL+ME+ LH+RVIGQ+EAV+A++ AIRR+R GL +PNRPI SF+F GPTGVGK+EL K LA + F SE+ M+R+DMSEFME+H Sbjct: 510 EKQLDLAAQAEM-----QEMSLLKNK-------VTDAEIAEVLSKQTGIPVAKMLEGERDKLLRMEDELHQRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDSEDNMVRIDMSEFMEKH 641
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_BORPE (Chaperone protein clpB OS=Bordetella pertussis GN=clpB PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.730e-34 Identity = 77/154 (50.00%), Postives = 110/154 (71.43%), Query Frame = 1 Query: 1 FEKAGELRDREM-DLKAQISALVDKGKEMSKAET-EARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 F+K EL+ ++ +L+A++ A +E ++++ + R + V +I +VS TGIPV K+ E D+LL+ME+ LHKRV+GQDEAV+ +S AIRR+R GL +P+RP SF+F GPTGVGK+EL +ALA + F SEE MIR+DMSEFME+H Sbjct: 494 FDKLAELQYGKLPELEARLKAADSAEREAGESDSGKPRLLRTQVGAEEIAEVVSRATGIPVAKMMQGERDKLLRMEDFLHKRVVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRALADFLFDSEEHMIRIDMSEFMEKH 647 The following BLAST results are available for this feature:
BLAST of CX287077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287077 ID=CX287077; Name=CX287077; organism=Citrus clementina; type=EST; length=457bpback to top |