CX287077
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_BORPA (Chaperone protein clpB OS=Bordetella parapertussis GN=clpB PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.730e-34 Identity = 77/154 (50.00%), Postives = 110/154 (71.43%), Query Frame = 1 Query: 1 FEKAGELRDREM-DLKAQISALVDKGKEMSKAET-EARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 F+K EL+ ++ +L+A++ A +E ++++ + R + V +I +VS TGIPV K+ E D+LL+ME+ LHKRV+GQDEAV+ +S AIRR+R GL +P+RP SF+F GPTGVGK+EL +ALA + F SEE MIR+DMSEFME+H Sbjct: 494 FDKLAELQYGKLPELEARLKAADSAEREAGESDSGKPRLLRTQVGAEEIAEVVSRATGIPVAKMMQGERDKLLRMEDFLHKRVVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRALADFLFDSEEHMIRIDMSEFMEKH 647
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_BORBR (Chaperone protein clpB OS=Bordetella bronchiseptica GN=clpB PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.730e-34 Identity = 77/154 (50.00%), Postives = 110/154 (71.43%), Query Frame = 1 Query: 1 FEKAGELRDREM-DLKAQISALVDKGKEMSKAET-EARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 F+K EL+ ++ +L+A++ A +E ++++ + R + V +I +VS TGIPV K+ E D+LL+ME+ LHKRV+GQDEAV+ +S AIRR+R GL +P+RP SF+F GPTGVGK+EL +ALA + F SEE MIR+DMSEFME+H Sbjct: 494 FDKLAELQYGKLPELEARLKAADSAEREAGESDSGKPRLLRTQVGAEEIAEVVSRATGIPVAKMMQGERDKLLRMEDFLHKRVVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRALADFLFDSEEHMIRIDMSEFMEKH 647
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_STAES (Chaperone protein clpB OS=Staphylococcus epidermidis (strain ATCC 12228) GN=clpB PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 3.565e-34 Identity = 79/156 (50.64%), Postives = 107/156 (68.59%), Query Frame = 1 Query: 4 EKAGELR-----DREMDLKAQISALVDKGKEMSKAETEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 EKA EL+ E +L+ A D+ E S+ R + VV++ +I IVS WTGIPV K+ E ++LL + + LHKRV+GQD+AV +S A+ RAR G+K+PNRPI SF+F GPTGVGK+ELAK+LA+ F SE+ MIR+DMSE+ME+H Sbjct: 495 EKAAELQYGTIPQLEKELQEFEEAFQDETGEDSE-----RMIREVVSDEEIGDIVSQWTGIPVSKLVETEREKLLSLSDILHKRVVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLASSLFDSEKHMIRIDMSEYMEKH 645
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_PASMU (Chaperone protein clpB OS=Pasteurella multocida GN=clpB PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 3.565e-34 Identity = 72/131 (54.96%), Postives = 100/131 (76.34%), Query Frame = 1 Query: 76 KEMSKAET-EARDVGPV---VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 K++++AE+ E +++ + VT+ +I ++S TGIPV K+ E ++LL+MEE LHKRVIGQ EA++A+S AIRR+R GL +PNRPI SF+F GPTGVGK+EL K LA + F E AM+R+DMSEFME+H Sbjct: 510 KQLAQAESAEGKEMTLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEKLLRMEEELHKRVIGQHEAIEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDENAMVRIDMSEFMEKH 640
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_LISMO (Chaperone protein clpB OS=Listeria monocytogenes GN=clpB PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 3.565e-34 Identity = 78/151 (51.66%), Postives = 105/151 (69.54%), Query Frame = 1 Query: 7 KAGELRDREMD-LKAQISALVDKGKEMSKAETEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 KA ELR + ++ ++ L + +E K E R + VTE +I IV WTGIPV K+ E ++LLK+ + LH++VIGQD+AV+ +S A+ RAR G+K+P RPI SFIF GPTGVGK+ELAKALA F SE+ MIR+DMSE+ME+H Sbjct: 499 KAAELRHGRIPAVEKELLELEAENRE--KTAQEDRILQEEVTENEIAEIVGRWTGIPVTKLVEGEREKLLKLADVLHQKVIGQDDAVQLVSDAVLRARAGIKDPKRPIGSFIFLGPTGVGKTELAKALAFNMFDSEDHMIRIDMSEYMEKH 647
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_LISMF (Chaperone protein clpB OS=Listeria monocytogenes serotype 4b (strain F2365) GN=clpB PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 3.565e-34 Identity = 78/151 (51.66%), Postives = 106/151 (70.20%), Query Frame = 1 Query: 7 KAGELRDREMD-LKAQISALVDKGKEMSKAETEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 KA ELR ++ ++ ++ L + +E K E R + VTE +I IV WTGIPV K+ E ++LLK+ + LH++VIGQD+AV+ +S A+ RAR G+K+P RPI SFIF GPTGVGK+ELAKALA F SE+ MIR+DMSE+ME+H Sbjct: 499 KAAELRHGKIPAVEKELLELEAENRE--KTAQEDRILQEEVTENEIAEIVGRWTGIPVTKLVEGEREKLLKLADELHQKVIGQDDAVQLVSDAVLRARAGIKDPKRPIGSFIFLGPTGVGKTELAKALAFNMFDSEDHMIRIDMSEYMEKH 647
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_XYLFA (Chaperone protein clpB OS=Xylella fastidiosa GN=clpB PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 6.081e-34 Identity = 66/111 (59.46%), Postives = 87/111 (78.38%), Query Frame = 1 Query: 124 VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 VT +I +VS WTGIPV K+ E D+LL+ME L +RV+GQ+EA+K +S A+RR+R GL +PNRP SF+F GPTGVGK+EL KALA + F S++AM+R+DMSEFME+H Sbjct: 531 VTAEEIAEVVSRWTGIPVSKMLEGERDKLLRMEADLGRRVVGQEEAIKVVSDAVRRSRTGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDSQDAMVRIDMSEFMEKH 641
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_VIBCH (Chaperone protein clpB OS=Vibrio cholerae GN=clpB PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 6.081e-34 Identity = 67/111 (60.36%), Postives = 88/111 (79.28%), Query Frame = 1 Query: 124 VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 VT+ +I ++S TGIPV K+ E ++LL+ME+ LHKRVIGQ EAV+ ++ AIRR+R GL +PNRPI SF+F GPTGVGK+EL K LA + F SE+AM+R+DMSEFME+H Sbjct: 531 VTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDMSEFMEKH 641
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_LACLM (Chaperone protein clpB OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=clpB PE=2 SV=3) HSP 1 Score: 142.895 bits (359), Expect = 6.081e-34 Identity = 76/152 (50.00%), Postives = 106/152 (69.74%), Query Frame = 1 Query: 4 EKAGELRDREM-DLKAQISALVDKGKEMSKAETEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 EKA LR ++ +++ ++ A+ +K K + V VTE I +V TGIP+ K+ E ++LL + ETLH+RV+GQDEAV+A+S AI RAR G+++PNRP+ SF+F GPTGVGK+ELAKALA F SEE M+R+DMSE+ME+H Sbjct: 498 EKAAALRYGKIPEIEKELKAIEEKAKS-----DDLSLVQESVTEEQIAEVVGRMTGIPITKLVEGEREKLLHLPETLHQRVVGQDEAVEAVSDAIIRARAGIQDPNRPLGSFLFLGPTGVGKTELAKALAENLFDSEEHMVRIDMSEYMEKH 644
BLAST of CX287077 vs. ExPASy Swiss-Prot
Match: CLPB_LACLA (Chaperone protein clpB OS=Lactococcus lactis subsp. lactis GN=clpB PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 6.081e-34 Identity = 76/152 (50.00%), Postives = 106/152 (69.74%), Query Frame = 1 Query: 4 EKAGELRDREM-DLKAQISALVDKGKEMSKAETEARDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 456 EKA LR ++ +++ ++ A+ +K K + V VTE I +V TGIP+ K+ E ++LL + ETLH+RV+GQDEAV+A+S AI RAR G+++PNRP+ SF+F GPTGVGK+ELAKALA F SEE M+R+DMSE+ME+H Sbjct: 498 EKAAALRYGKIPEIEKELKAIEEKAKS-----DDLSLVQESVTEEQITEVVGRMTGIPITKLVEGEREKLLHLPETLHQRVVGQDEAVEAVSDAIIRARAGIQDPNRPLGSFLFLGPTGVGKTELAKALAENLFDSEEHMVRIDMSEYMEKH 644 The following BLAST results are available for this feature:
BLAST of CX287077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287077 ID=CX287077; Name=CX287077; organism=Citrus clementina; type=EST; length=457bpback to top |