CX287081
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287081 vs. ExPASy Swiss-Prot
Match: RS26_BOVIN (40S ribosomal protein S26 OS=Bos taurus GN=RPS26 PE=3 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 8.309e-18 Identity = 41/89 (46.07%), Postives = 50/89 (56.18%), Query Frame = 3 Query: 3 IRCSNCGKCCPKDKAIKRFLVRNIAEQAAVRDVQEARVYDGYTLPKLYAKMQYCXXXXXXXXXXXXXXXXXXXXXEPPQRFMRRDDVPK 269 IRC+NC +C PKDKAIK+F++RNI E AAVRD+ EA V+D Y LPKLY K+ YC PP RF P+ Sbjct: 21 IRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAGAAPR 109
BLAST of CX287081 vs. ExPASy Swiss-Prot
Match: RS26_ANOGA (40S ribosomal protein S26 OS=Anopheles gambiae GN=RpS26 PE=3 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 8.309e-18 Identity = 40/85 (47.06%), Postives = 50/85 (58.82%), Query Frame = 3 Query: 3 IRCSNCGKCCPKDKAIKRFLVRNIAEQAAVRDVQEARVYDGYTLPKLYAKMQYCXXXXXXXXXXXXXXXXXXXXXEPPQRFMRRD 257 +RC+NC +C PKDKAIK+F++RNI E AAVRD+ +A VY Y LPKLYAK+ YC PPQR +D Sbjct: 21 VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYSSYVLPKLYAKLHYCVSCAIHSKVVRNRSKETRRIRTPPQRSFPKD 105
BLAST of CX287081 vs. ExPASy Swiss-Prot
Match: RS26_SHEEP (40S ribosomal protein S26 OS=Ovis aries GN=RPS26 PE=3 SV=3) HSP 1 Score: 88.5817 bits (218), Expect = 1.085e-17 Identity = 41/89 (46.07%), Postives = 50/89 (56.18%), Query Frame = 3 Query: 3 IRCSNCGKCCPKDKAIKRFLVRNIAEQAAVRDVQEARVYDGYTLPKLYAKMQYCXXXXXXXXXXXXXXXXXXXXXEPPQRFMRRDDVPK 269 IRC+NC +C PKDKAIK+F++RNI E AAVRD+ EA V+D Y LPKLY K+ YC PP RF P+ Sbjct: 21 IRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEAGVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAGAAPR 109
BLAST of CX287081 vs. ExPASy Swiss-Prot
Match: RS26_DROME (40S ribosomal protein S26 OS=Drosophila melanogaster GN=RpS26 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.417e-17 Identity = 35/54 (64.81%), Postives = 45/54 (83.33%), Query Frame = 3 Query: 3 IRCSNCGKCCPKDKAIKRFLVRNIAEQAAVRDVQEARVYDGYTLPKLYAKMQYC 164 +RC+NC +C PKDKAIK+F++RNI E AAVRD+ EA ++D Y LPKLYAK+ YC Sbjct: 21 VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWDSYVLPKLYAKLHYC 74
BLAST of CX287081 vs. ExPASy Swiss-Prot
Match: RS26_CRICR (40S ribosomal protein S26 OS=Cricetus cricetus GN=RPS26 PE=3 SV=3) HSP 1 Score: 87.4261 bits (215), Expect = 2.417e-17 Identity = 40/89 (44.94%), Postives = 50/89 (56.18%), Query Frame = 3 Query: 3 IRCSNCGKCCPKDKAIKRFLVRNIAEQAAVRDVQEARVYDGYTLPKLYAKMQYCXXXXXXXXXXXXXXXXXXXXXEPPQRFMRRDDVPK 269 IRC+NC +C PKDKAIK+F++RNI E AAVRD+ EA V+D Y LPKLY ++ YC PP RF P+ Sbjct: 21 IRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVELHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAGAAPR 109
BLAST of CX287081 vs. ExPASy Swiss-Prot
Match: RS26_OCTVU (40S ribosomal protein S26 OS=Octopus vulgaris GN=RPS26 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 7.034e-17 Identity = 36/54 (66.67%), Postives = 45/54 (83.33%), Query Frame = 3 Query: 3 IRCSNCGKCCPKDKAIKRFLVRNIAEQAAVRDVQEARVYDGYTLPKLYAKMQYC 164 IRC+NC +C PKDKAIK+F++RNI E AAVRD+ +A VY+ Y LPKLYAK+ YC Sbjct: 21 IRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYEVYALPKLYAKLLYC 74
BLAST of CX287081 vs. ExPASy Swiss-Prot
Match: RS26_BRUPA (40S ribosomal protein S26 (Fragment) OS=Brugia pahangi PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 7.034e-17 Identity = 36/54 (66.67%), Postives = 43/54 (79.63%), Query Frame = 3 Query: 3 IRCSNCGKCCPKDKAIKRFLVRNIAEQAAVRDVQEARVYDGYTLPKLYAKMQYC 164 IRC+NCG+C PKDKAIK+F+VRNI AAVRD+ +A YD Y LPKLY K+ YC Sbjct: 21 IRCTNCGRCAPKDKAIKKFVVRNIVVAAAVRDISDASAYDSYALPKLYHKLHYC 74
BLAST of CX287081 vs. ExPASy Swiss-Prot
Match: RS26_NEUCR (40S ribosomal protein S26E OS=Neurospora crassa GN=rps-26 PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 2.047e-16 Identity = 34/54 (62.96%), Postives = 44/54 (81.48%), Query Frame = 3 Query: 3 IRCSNCGKCCPKDKAIKRFLVRNIAEQAAVRDVQEARVYDGYTLPKLYAKMQYC 164 IRCSNC +C PKDKAIKRF +RN+ E AA+RD+ +A V+ YT+PK+Y K+QYC Sbjct: 21 IRCSNCSRCTPKDKAIKRFTIRNMVESAAIRDISDASVFAEYTVPKMYLKLQYC 74
BLAST of CX287081 vs. ExPASy Swiss-Prot
Match: RS26L_HUMAN (Putative 40S ribosomal protein S26-like 1 OS=Homo sapiens GN=RPS26P11 PE=5 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.673e-16 Identity = 39/89 (43.82%), Postives = 48/89 (53.93%), Query Frame = 3 Query: 3 IRCSNCGKCCPKDKAIKRFLVRNIAEQAAVRDVQEARVYDGYTLPKLYAKMQYCXXXXXXXXXXXXXXXXXXXXXEPPQRFMRRDDVPK 269 IRC+NC +C P DKAIK+F++RNI E AAVRD+ E V+D Y LPKLY K+ YC PP RF P+ Sbjct: 21 IRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREACKDRTPPPRFRPAGAAPR 109
BLAST of CX287081 vs. ExPASy Swiss-Prot
Match: RS26_SCHCO (40S ribosomal protein S26 OS=Schizophyllum commune GN=RPS26 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.041e-15 Identity = 33/54 (61.11%), Postives = 41/54 (75.93%), Query Frame = 3 Query: 3 IRCSNCGKCCPKDKAIKRFLVRNIAEQAAVRDVQEARVYDGYTLPKLYAKMQYC 164 +RCSNC +C KDKAIKRF VRN+ E AA+RD+ +A VY Y +PKLY K+ YC Sbjct: 21 VRCSNCSRCVAKDKAIKRFTVRNMVESAAIRDISDASVYPEYAIPKLYIKIAYC 74 The following BLAST results are available for this feature:
BLAST of CX287081 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287081 ID=CX287081; Name=CX287081; organism=Citrus clementina; type=EST; length=269bpback to top |