CX287081
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287081 vs. ExPASy Swiss-Prot
Match: RS26B_SCHPO (40S ribosomal protein S26-B OS=Schizosaccharomyces pombe GN=rps26b PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.041e-15 Identity = 33/54 (61.11%), Postives = 42/54 (77.78%), Query Frame = 3 Query: 3 IRCSNCGKCCPKDKAIKRFLVRNIAEQAAVRDVQEARVYDGYTLPKLYAKMQYC 164 +RC NC + PKDKAIKR+ +RN+ E AA+RD+ EA VY YT+PKLY K+QYC Sbjct: 21 VRCINCSRAVPKDKAIKRWTIRNMVETAAIRDLSEASVYSEYTIPKLYIKLQYC 74
BLAST of CX287081 vs. ExPASy Swiss-Prot
Match: RS26B_YEAST (40S ribosomal protein S26-B OS=Saccharomyces cerevisiae GN=RPS26B PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.267e-14 Identity = 38/80 (47.50%), Postives = 42/80 (52.50%), Query Frame = 3 Query: 3 IRCSNCGKCCPKDKAIKRFLVRNIAEQAAVRDVQEARVYDGYTLPKLYAKMQYCXXXXXXXXXXXXXXXXXXXXXEPPQR 242 +RC NC K PKDKAIKR +RNI E AAVRD+ EA VY Y LPK Y K+ YC PPQR Sbjct: 21 VRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYPEYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPPQR 100
BLAST of CX287081 vs. ExPASy Swiss-Prot
Match: RS26A_YEAST (40S ribosomal protein S26-A OS=Saccharomyces cerevisiae GN=RPS26A PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.267e-14 Identity = 38/80 (47.50%), Postives = 42/80 (52.50%), Query Frame = 3 Query: 3 IRCSNCGKCCPKDKAIKRFLVRNIAEQAAVRDVQEARVYDGYTLPKLYAKMQYCXXXXXXXXXXXXXXXXXXXXXEPPQR 242 +RC NC K PKDKAIKR +RNI E AAVRD+ EA VY Y LPK Y K+ YC PPQR Sbjct: 21 VRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYPEYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPPQR 100
BLAST of CX287081 vs. ExPASy Swiss-Prot
Match: RS26A_SCHPO (40S ribosomal protein S26-A OS=Schizosaccharomyces pombe GN=rps26a PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.267e-14 Identity = 31/54 (57.41%), Postives = 41/54 (75.93%), Query Frame = 3 Query: 3 IRCSNCGKCCPKDKAIKRFLVRNIAEQAAVRDVQEARVYDGYTLPKLYAKMQYC 164 +RC NC + PKDKAIKR+ +RN+ E AA+RD+ EA VY Y +PK+Y K+QYC Sbjct: 21 VRCINCSRAVPKDKAIKRWNIRNMVETAAIRDLSEASVYSEYAIPKIYVKLQYC 74
BLAST of CX287081 vs. ExPASy Swiss-Prot
Match: RS26_DICDI (40S ribosomal protein S26 OS=Dictyostelium discoideum GN=rps26 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.793e-12 Identity = 30/56 (53.57%), Postives = 40/56 (71.43%), Query Frame = 3 Query: 3 IRCSNCGKCCPKDKAIKRFLVRNIAEQAAVRDVQEARVYD--GYTLPKLYAKMQYC 164 IRC+NC +C PKDKA+KRF +R I E AAV+D+ + V++ GY P+ Y K QYC Sbjct: 21 IRCTNCARCVPKDKAVKRFYIRPIVENAAVKDISDQGVFNVKGYKFPRTYVKSQYC 76 The following BLAST results are available for this feature:
BLAST of CX287081 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287081 ID=CX287081; Name=CX287081; organism=Citrus clementina; type=EST; length=269bpback to top |