CX287101
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287101 vs. ExPASy Swiss-Prot
Match: RLMN_BACFN (Ribosomal RNA large subunit methyltransferase N OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=rlmN PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.400e-11 Identity = 42/111 (37.84%), Postives = 59/111 (53.15%), Query Frame = 1 Query: 145 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQV 477 LLGM+ ELQ + DLG ++ KQ+ +Y +KV I+ L R +L + + +G + + DGTVK L ++ DN +E V IP ED R T CVSSQV Sbjct: 6 LLGMTLTELQSVTKDLGMPAFAAKQIASWLYDKKVTSIDEMTNLSLKHR-ELLKGEYDLGISAPVDEMRSVDGTVKYLYQVSDNHFVEAVYIPDED-----RATLCVSSQV 110
BLAST of CX287101 vs. ExPASy Swiss-Prot
Match: RLMN_SALRD (Ribosomal RNA large subunit methyltransferase N OS=Salinibacter ruber (strain DSM 13855) GN=rlmN PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.359e-11 Identity = 47/118 (39.83%), Postives = 59/118 (50.00%), Query Frame = 1 Query: 127 RVDANVLLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKG-PMRLTACVSSQV 477 RVD L M L+ + G YRG QL + +Y + V + + LP+ R LQ TV + I AAD TVK L +L R ETV IP DE+G RLT CVSS+V Sbjct: 17 RVD---LKTMGRAGLKDFVAEHGAPRYRGDQLFNWVYGKGVSDFDRMSNLPKRMRRGLQRDA-TVEDIEIVEQQQAADRTVKALFELPSGREAETVLIPAIDERGEARRLTVCVSSEV 130
BLAST of CX287101 vs. ExPASy Swiss-Prot
Match: RLMN_PORG3 (Ribosomal RNA large subunit methyltransferase N OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=rlmN PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.359e-11 Identity = 42/112 (37.50%), Postives = 59/112 (52.68%), Query Frame = 1 Query: 142 VLLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQV 477 VLLGMS +EL +A+ +G + GKQL IY R+ + + Q+ R L E + +GR P + DGT K L + + R +E+V IP D R T C+SSQV Sbjct: 12 VLLGMSLEELTTVALRMGMPRFAGKQLAEWIYVRRATDFAEMTNISQANRQKLAEI-YDLGRYPWSDVQCSVDGTKKYLFPVGEGRFVESVLIPEGD-----RATLCISSQV 117
BLAST of CX287101 vs. ExPASy Swiss-Prot
Match: RLMN_PARD8 (Ribosomal RNA large subunit methyltransferase N OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=rlmN PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.359e-11 Identity = 41/116 (35.34%), Postives = 61/116 (52.59%), Query Frame = 1 Query: 130 VDANVLLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQV 477 VD LLGM+ +EL+ +A ++G +Y KQ+ IYK+K+ I + + + L E + +G P + DGT+K L R +E+V IP +D R T CVSSQV Sbjct: 2 VDKRQLLGMTLEELKGVASEVGLPAYAAKQMADWIYKKKITRISEMTNIAVA-KRALLEDSFEIGAYPPSEYQKSKDGTIKYLYAAGPGRFVESVYIPTDD-----RATLCVSSQV 111 The following BLAST results are available for this feature:
BLAST of CX287101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287101 ID=CX287101; Name=CX287101; organism=Citrus clementina; type=EST; length=477bpback to top |