CX287104
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287104 vs. ExPASy Swiss-Prot
Match: TIM17_NEUCR (Mitochondrial import inner membrane translocase subunit tim-17 OS=Neurospora crassa GN=tim-17 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.537e-27 Identity = 65/133 (48.87%), Postives = 82/133 (61.65%), Query Frame = 3 Query: 153 SREPCPDRILDDXXXXXXXXXXXXXXXHFLKGTYNSPSGARLSGGTQAVRMNAPRVGGSFAVWGGLFSTFDCTMVYLR-QKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVLLALIEGAGIMLNKVLS 548 +R+PCP IL+D H +KG NSP G R G A++M AP +GG+F VWGGLFSTFDC + LR KEDPWNSI+AG TGG L++R G +A A+ VLLA+IEG GI K+L+ Sbjct: 4 TRDPCPWVILNDFGGAFAMGAIGGTIWHGIKGFRNSPYGERRIGAITAIKMRAPALGGNFGVWGGLFSTFDCAIKGLRNHKEDPWNSILAGFFTGGALAVRGGYKAARNGAIGCAVLLAVIEGVGIGFQKMLA 136
BLAST of CX287104 vs. ExPASy Swiss-Prot
Match: TIM17_YEAST (Mitochondrial import inner membrane translocase subunit TIM17 OS=Saccharomyces cerevisiae GN=TIM17 PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.644e-26 Identity = 63/139 (45.32%), Postives = 83/139 (59.71%), Query Frame = 3 Query: 153 SREPCPDRILDDXXXXXXXXXXXXXXXHFLKGTYNSPSGARLSGGTQAVRMNAPRVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVLLALIEGAGIMLNKVLSAPQNMPM 569 SR+PCP IL+D H +KG NSP G R SG A++ AP +GG+F VWGGLFSTFDC + +R++EDPWN+IIAG TGG L++R G S++ LL +IEG G+M + +A Q PM Sbjct: 6 SRDPCPIVILNDFGGAFAMGAIGGVVWHGIKGFRNSPLGERGSGAMSAIKARAPVLGGNFGVWGGLFSTFDCAVKAVRKREDPWNAIIAGFFTGGALAVRGGWRHTRNSSITCACLLGVIEGVGLMFQR-YAAWQAKPM 143
BLAST of CX287104 vs. ExPASy Swiss-Prot
Match: TIM17_SCHPO (Mitochondrial import inner membrane translocase subunit tim17 OS=Schizosaccharomyces pombe GN=tim17 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.375e-25 Identity = 60/145 (41.38%), Postives = 84/145 (57.93%), Query Frame = 3 Query: 135 MGTPETSREPCPDRILDDXXXXXXXXXXXXXXXHFLKGTYNSPSGARLSGGTQAVRMNAPRVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVLLALIEGAGIMLNKVLSAPQNMPM 569 M + + +R+PCP IL+D H +KG NSP G + A + AP +GG+F VWGGLFSTFDC + +R+KEDPWN+IIAG TGG L++R G + A+ +LA+ EG GI L + ++A N P+ Sbjct: 1 MASADHTRDPCPYVILNDFGAAFSMGTIGGAIWHSIKGWRNSPPGEKRISAIAAAKTRAPVLGGNFGVWGGLFSTFDCAVKGVRRKEDPWNAIIAGFFTGGALAVRGGWRATRNGAIGCACILAVFEGLGIALGR-MNAEYNRPV 144
BLAST of CX287104 vs. ExPASy Swiss-Prot
Match: TIM17_CAEEL (Probable mitochondrial import inner membrane translocase subunit Tim17 OS=Caenorhabditis elegans GN=tim-17 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.103e-22 Identity = 55/135 (40.74%), Postives = 76/135 (56.30%), Query Frame = 3 Query: 147 ETSREPCPDRILDDXXXXXXXXXXXXXXXHFLKGTYNSPSGARLSGGTQAVRMNAPRVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVLLALIEGAGIMLNKVLSA 551 E +REPCP RI DD G N+ G +L G + VRM + G FA WGG+FST DC +V +R+KEDP NSI++G TG L++R G + SA+ G V+LA+IEG G++ + + A Sbjct: 3 EYTREPCPYRIGDDIGSAFAMGLVGGSIFQAFGGYKNAAKGKKLVGMMREVRMRSTLTGVQFAAWGGMFSTIDCCLVAIRKKEDPINSIVSGGLTGALLAIRSGPKVMAGSAILGSVILAMIEGVGLVTTRWMGA 137
BLAST of CX287104 vs. ExPASy Swiss-Prot
Match: TIM17_DICDI (Mitochondrial import inner membrane translocase subunit tim17 OS=Dictyostelium discoideum GN=timm17 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 8.740e-20 Identity = 50/132 (37.88%), Postives = 70/132 (53.03%), Query Frame = 3 Query: 162 PCPDRILDDXXXXXXXXXXXXXXXHFLKGTYNSPSGARLSGGTQAVRMNAPRVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVLLALIEGAGIMLNKVLSAPQ 557 PCPD+I D + G SP R+ +R +P+ GG+FA+WG LFS FDCT+ Y+R+ ED N I AGA TGG L+ R G + ++A FGG+ + +IE M+ K + A Q Sbjct: 4 PCPDKIWQDAGGAFAIGYVLMGVVNIGLGFKRSPPNKRVLYTFALLRKKSPKFGGNFAIWGSLFSGFDCTLSYIRKTEDTVNPIAAGALTGGILAARSGWKHSVQAAAFGGIFIGIIEAFQHMMQKRMQAQQ 135 The following BLAST results are available for this feature:
BLAST of CX287104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287104 ID=CX287104; Name=CX287104; organism=Citrus clementina; type=EST; length=576bpback to top |