CX287112
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287112 vs. ExPASy Swiss-Prot
Match: Y639_ARATH (Probable polygalacturonase non-catalytic subunit At1g60390 OS=Arabidopsis thaliana GN=At1g60390 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.016e-13 Identity = 32/91 (35.16%), Postives = 48/91 (52.75%), Query Frame = -1 Query: 198 GVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYIVPLEGVDGTKA--KAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVW 464 G+ ++V CH+ YPY ++YCH+ R Y L + A+CH DTSAW+P H AF L PG + +CH++ E+ + W Sbjct: 530 GINGGDVTRAVSCHQSLYPYLLYYCHSVPRVRVYETDLLDPKSLEKINHGVAICHIDTSAWSPSHGAFLALGSGPGQIEVCHWIFENDMTW 620
BLAST of CX287112 vs. ExPASy Swiss-Prot
Match: GP3_SOLLC (Polygalacturonase non-catalytic subunit AroGP3 OS=Solanum lycopersicum GN=GP3 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.016e-13 Identity = 34/92 (36.96%), Postives = 51/92 (55.43%), Query Frame = -1 Query: 198 GVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYIVPLEGVDGTKAK---AAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVW 464 G+ KSV CH+ YP ++YCH+ R Y + + +KAK A+CH DTS+W P+H AF L PG + +CH++ E+ + W Sbjct: 538 GINGGKVTKSVSCHQTLYPSLLYYCHSVPKVRVYEADILDPN-SKAKINHGVAICHVDTSSWGPRHGAFVALGSGPGKIEVCHWIFENDMTW 628
BLAST of CX287112 vs. ExPASy Swiss-Prot
Match: BURPG_ORYSJ (BURP domain-containing protein 16 OS=Oryza sativa subsp. japonica GN=BURP16 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.016e-13 Identity = 37/93 (39.78%), Postives = 48/93 (51.61%), Query Frame = -1 Query: 195 GVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYIVPLEGVDGTKAK---AAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWV 464 G+ SV CH+ +PY V+YCH+ R Y + V TK K A+CH DTSAWN H AF L KPG +CH++ + WV Sbjct: 248 GINGGKITSSVSCHEYLFPYMVYYCHSVPKIRVYEAEILSVQ-TKEKINSGVAICHIDTSAWNAGHPAFVALGGKPGQNKVCHWIFNGSMTWV 339
BLAST of CX287112 vs. ExPASy Swiss-Prot
Match: BURP2_ORYSJ (BURP domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=BURP2 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.016e-13 Identity = 38/83 (45.78%), Postives = 47/83 (56.63%), Query Frame = -1 Query: 189 VVCHKQNYPYAVFYCHATQTTRAYIVPLEGVDGTKAKAAAVCHTDTSAWNPKHL-AFQVLKVKPGTVPICHFLPEDHIVWVPN 434 V CH+ Y YAVF H + AY V L G DGT A+A A CH D A++ L V PG V +CHFLP+D ++WV N Sbjct: 206 VACHRMPYAYAVFGVHGIKGA-AYTVTLAGADGTMAEAVAACHGDVDGHGVAVAEAYKRLGVAPGKVAVCHFLPQDDMLWVRN 287
BLAST of CX287112 vs. ExPASy Swiss-Prot
Match: GP2_SOLLC (Polygalacturonase non-catalytic subunit AroGP2 OS=Solanum lycopersicum GN=GP2 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 7.858e-13 Identity = 34/92 (36.96%), Postives = 51/92 (55.43%), Query Frame = -1 Query: 198 GVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYIVPLEGVDGTKAK---AAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVW 464 G+ KSV CH+ YP ++YCH+ R Y + + +KAK A+CH DTS+W P+H AF L PG + +CH++ E+ + W Sbjct: 535 GINGGKVTKSVSCHQTLYPSLLYYCHSVPKVRVYEADILDPN-SKAKINHGVAICHVDTSSWGPRHGAFIALGSGPGKIEVCHWIFENDMTW 625
BLAST of CX287112 vs. ExPASy Swiss-Prot
Match: BURP4_ORYSJ (BURP domain-containing protein 4 OS=Oryza sativa subsp. japonica GN=BURP4 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.900e-12 Identity = 38/107 (35.51%), Postives = 57/107 (53.27%), Query Frame = -1 Query: 189 GTKMQTYTIAA-GVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYIVPLEGVDGT---KAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPN 497 G + + Y +AA GV ++ D V CH Y Y V+YCH A V L V A A AVCH +T+ W+ + F++LK G ICH++P+ +++W+ N Sbjct: 376 GREPRRYVVAADGVARIGGDAVVACHPMPYLYEVYYCHRPADAVALRVDLHAVADVGLGGATAVAVCHVNTTTWDSAY--FELLKASRGDA-ICHYMPQGYVLWLAN 479
BLAST of CX287112 vs. ExPASy Swiss-Prot
Match: BURPE_ORYSJ (BURP domain-containing protein 14 OS=Oryza sativa subsp. japonica GN=BURP14 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.631e-11 Identity = 34/87 (39.08%), Postives = 45/87 (51.72%), Query Frame = -1 Query: 201 KSVVCHKQNYPYAVFYCHATQTTRAYIVPLEGVDGTKA--KAAAVCHTDTSAWNPKHLAFQVLKVKPG-----TVPICHFLPEDHIV 440 +SV CH+ +PY V+YCH+ T R Y + VD + A+CH DTS W+P H AF L KPG T IC + + V Sbjct: 604 RSVSCHQSLFPYLVYYCHSVPTVRVYEADILAVDSNQKINHGVAICHLDTSDWSPNHGAFIALGGKPGKKVDPTKFICFIMQDGEFV 690 The following BLAST results are available for this feature:
BLAST of CX287112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287112 ID=CX287112; Name=CX287112; organism=Citrus clementina; type=EST; length=506bpback to top |