CX287113
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287113 vs. ExPASy Swiss-Prot
Match: THI4_YEAST (Thiazole biosynthetic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=THI4 PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 3.010e-38 Identity = 89/187 (47.59%), Postives = 111/187 (59.36%), Query Frame = 1 Query: 4 RKPAQRFLDELGVEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG------RVGGVVTNWALVSMNHDTQSCMDPNVMEAK---------------IVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREI--VPGMIVTGMEVA*IDGAPRMGPT 495 RKPA FL EL + Y+++ +YVV+KHAALF ST++SK+L PNVKLFNA EDL+ + V GVVTNW LV+ H TQ CMDPNV+E +++S+ GHDGPFGA KR+ I + GMK LDMN AE +V + V M GMEVA +DG RMGPT Sbjct: 119 RKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVAELDGLNRMGPT 305
BLAST of CX287113 vs. ExPASy Swiss-Prot
Match: THI4_PYRKO (Putative thiazole biosynthetic enzyme OS=Pyrococcus kodakaraensis GN=TK0434 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.094e-23 Identity = 65/163 (39.88%), Postives = 90/163 (55.21%), Query Frame = 1 Query: 4 RKPAQRFLDELGVEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVA*IDGAPRMGP 492 ++ A+ LDE GV+Y + N + + + ST+ SK + + K+FN V EDL+VK GRV G+V NW V M T +DP +EAK VV S GH GA + L G+I ++PG + E+ V TRE+ PG+ TGM + GAPRMGP Sbjct: 75 QESAREILDEFGVDYSQVGNGLYVLDSIELASTLASKAV-KAGAKIFNMVEVEDLVVKDGRVSGLVINWTPVMM---TGLHVDPLTVEAKFVVDSTGH----GAQISQHLLKRGLIKAIPGEGPMWAEKGEELTVEHTREVFPGLYATGMAANALAGAPRMGP 229
BLAST of CX287113 vs. ExPASy Swiss-Prot
Match: THI4_PYRHO (Putative thiazole biosynthetic enzyme OS=Pyrococcus horikoshii GN=PH1357 PE=3 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 4.665e-23 Identity = 63/160 (39.38%), Postives = 87/160 (54.37%), Query Frame = 1 Query: 13 AQRFLDELGVEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVA*IDGAPRMGP 492 A+ LDE G+ Y+E + + A +TI SK++ + VK+FN + EDL++K RV G+V NW V M +DP +EAK V+ S GH VKR G++ +PG A+ E V+ TRE+ PG+ VTGM I GAPRMGP Sbjct: 79 AREILDEFGIRYEEFEKGYYVADAIEVATTIASKVV-KSGVKIFNMIEVEDLVIKDNRVSGIVINWTPVLM---AGLHVDPLTIEAKYVIDSTGHGAQVAQFLVKR----GLLKEIPGEGAMWAEQGEKLTVKNTREVFPGLYVTGMAANAIAGAPRMGP 230
BLAST of CX287113 vs. ExPASy Swiss-Prot
Match: THI4_PYRFU (Putative thiazole biosynthetic enzyme OS=Pyrococcus furiosus GN=PF1530 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 4.665e-23 Identity = 64/163 (39.26%), Postives = 89/163 (54.60%), Query Frame = 1 Query: 4 RKPAQRFLDELGVEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVA*IDGAPRMGP 492 ++ A+ LDE + Y+E + + A +TI SK + + VK+FN V EDL+VK RV G+V NW V M T +DP +EAK V+ S GH GA + L G+I+ +PG A+ E V T+E+ PG+ VTGM + GAPRMGP Sbjct: 76 QEEAKEILDEFDIRYEEFEKGYYVADAIEVATTIASKTV-KAGVKIFNMVEVEDLVVKDDRVSGIVINWTPVKM---TGLHVDPLTVEAKYVIDSTGH----GAQVTQFLLKRGLIEKIPGEGAMWAEMGEKLTVENTKEVFPGLYVTGMAANAVSGAPRMGP 230
BLAST of CX287113 vs. ExPASy Swiss-Prot
Match: THI4_PYRAB (Putative thiazole biosynthetic enzyme OS=Pyrococcus abyssi GN=PYRAB07910 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 7.957e-23 Identity = 65/163 (39.88%), Postives = 89/163 (54.60%), Query Frame = 1 Query: 4 RKPAQRFLDELGVEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVA*IDGAPRMGP 492 ++ A+ LDE + Y+E + + A +TI SK + + VK+FN + EDL+VK RV G+V NW V M T +DP +EAK V+ S GH GA + L G+I+ +PG A+ E V TRE+ PG+ VTGM I GAPRMGP Sbjct: 76 QEEAREILDEFDIRYEEFEKGYYVADAIEVATTIASKTV-KAGVKIFNMIEVEDLVVKDNRVSGIVINWTPVLM---TGLHVDPLTVEAKYVIDSTGH----GAQVAQFLLKRGLIERIPGEGAMWAEQGERLTVENTREVFPGLYVTGMAANAIAGAPRMGP 230
BLAST of CX287113 vs. ExPASy Swiss-Prot
Match: THI4_AERPE (Putative thiazole biosynthetic enzyme OS=Aeropyrum pernix GN=APE_2149.1 PE=3 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 1.553e-18 Identity = 56/164 (34.15%), Postives = 88/164 (53.66%), Query Frame = 1 Query: 4 RKPAQRFLDELGVEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVA*IDGAPRMGPT 495 R PAQR LDEL V Y+ + L + + ++ L ++ N +D+IV+ RV GVV NW+ V +C+DP + A+ VV + GHD A ++L GM+++ + + + +ED +V T E+ PG++V G+ VA + G PRMGPT Sbjct: 80 RAPAQRILDELEVPYEAVKPGLYRTKGPLLAAKLAARAL-EAGAEVLNLTMLDDVIVENSRVAGVVVNWSPVQGLPRQITCVDPVGLRAEYVVDATGHD----AVVTRKLAERGMVEA-SKLGPMWVERSEDLVVEKTGEVYPGLVVAGIAVAEVYGLPRMGPT 237
BLAST of CX287113 vs. ExPASy Swiss-Prot
Match: THI4_HALWD (Putative thiazole biosynthetic enzyme OS=Haloquadratum walsbyi (strain DSM 16790) GN=HQ1276A PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.229e-16 Identity = 65/192 (33.85%), Postives = 94/192 (48.96%), Query Frame = 1 Query: 4 RKPAQRFLDELGVEYDEQDN----YVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG-RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHD----------GPFGATGVKRLK--SIGMIDSV-----------PGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVA*IDGAPRMGPT 495 R PAQ LDEL V Y+E D YV A+ +S I S A V+ N D++ + RVGG+V NW V +C+DP +E+ +VV S GHD G A G++ + GM ++ PG ++ ++ +ED +V T + PG++ TGM VA ++G PRMGPT Sbjct: 83 RDPAQSVLDELDVPYEESDEASGLYVADGPHAV-SSLIKSACDAGAEVQ--NMTEFTDVVTRENHRVGGIVLNWTPVHALPRELTCVDPVAVESDLVVDSTGHDAVVISKLSERGVLNAPGIEHANEHNTGMDNTADDEYGAPGHDSPGHDSMWVSRSEDQVVEHTGVVHPGVVATGMAVATVEGLPRMGPT 271
BLAST of CX287113 vs. ExPASy Swiss-Prot
Match: THI4_THEMA (Putative thiazole biosynthetic enzyme OS=Thermotoga maritima GN=TM_0787 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.042e-14 Identity = 54/163 (33.13%), Postives = 87/163 (53.37%), Query Frame = 1 Query: 7 KPAQRFLDELGVEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWA-LVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVA*IDGAPRMGP 492 K + FL E+ +EY+ +++++V+ + F S ++ + + +FN V+ ED+ V+ GRV GVV NW V + +DP ++A VV GH A V L G+++ +D + AE +V T EI PG++V+GM V + G PRMGP Sbjct: 78 KELENFLKEVEIEYEVKEDHIVVD-SVHFASGLLYRA-TKAGAIVFNNVSVEDVAVQNGRVCGVVVNWGPTVRLGLH----VDPITVKASFVVDGTGHP----ANVVSLLAKRGLVEMKTEFP-MDADEAEKFVVDNTGEIFPGLLVSGMAVCAVHGGPRMGP 229
BLAST of CX287113 vs. ExPASy Swiss-Prot
Match: THI4_HALMA (Putative thiazole biosynthetic enzyme OS=Haloarcula marismortui GN=rrnAC1782 PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 1.152e-13 Identity = 62/193 (32.12%), Postives = 88/193 (45.60%), Query Frame = 1 Query: 4 RKPAQRFLDELGVEY----DEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG-RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMI------DSVPGMKALDMNT------------------AEDAIVRLTREIVPGMIVTGMEVA*IDGAPRMGPT 495 R PAQ+ LDEL V++ D + YV A + + K K+ N D++++ RVGG+V NW V +C+DP +EA +V+ + GHD A VK+L G++ D GM D +T +EDA+V T G++VTGM A G PRMGPT Sbjct: 87 RDPAQQVLDELEVDHKRSKDSEGLYVANGPEAC---SGLIKAACDAGAKMQNMTEFTDIVIREDHRVGGIVMNWTPVHALPREITCVDPIAVEADLVIDATGHD----AMAVKKLDERGVLNAPGLEDEASGMDQTDDDTYGAPGHDSPGHDSMWVGESEDAVVEHTGLAHDGLVVTGMATATTYGLPRMGPT 272
BLAST of CX287113 vs. ExPASy Swiss-Prot
Match: THI4_SULSO (Putative thiazole biosynthetic enzyme OS=Sulfolobus solfataricus GN=SSO0436 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.566e-13 Identity = 47/164 (28.66%), Postives = 78/164 (47.56%), Query Frame = 1 Query: 7 KPAQRFLDELGVEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVA*IDGAPRMGP 492 KPA L E+ + E + V + +A F + + + + K+ + V +D+I + RV GV W M +DP + AK VV + GHD + +++ +G++ +PG K+ AE+ V T ++ G+ TGM V + G PRMGP Sbjct: 83 KPADEILREVNIRLKEVEEGVYVVDSAEFMAKLATAAIDA-GAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYATGMAVTEVKGLPRMGP 240 The following BLAST results are available for this feature:
BLAST of CX287113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287113 ID=CX287113; Name=CX287113; organism=Citrus clementina; type=EST; length=496bpback to top |