CX287118

Overview
NameCX287118
Unique NameCX287118
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length508
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX287118 vs. ExPASy Swiss-Prot
Match: CATA3_MAIZE (Catalase isozyme 3 OS=Zea mays GN=CAT3 PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 1.091e-30
Identity = 62/112 (55.36%), Postives = 81/112 (72.32%), Query Frame = -3 
Query:  174 NFMHRDEEIDYFPSRYDPVRHAEMH-PTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 506
            NFMHRDEE+DY+PSR+ P+R A    P PP    GRREK  I K N+FKQPGERYRSW  DRQ+RF+ R+ D+L  P+V+ E+R IWI   ++   SLG K+A+RLN++ N+
Sbjct:  385 NFMHRDEEVDYYPSRHAPLRQAAPPTPLPPRPVAGRREKATIRKPNDFKQPGERYRSWDADRQDRFVRRFADSLGHPKVSQELRSIWIDLLAKCDASLGMKIATRLNMKANM 496
The following BLAST results are available for this feature:
BLAST of CX287118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
CATA3_MAIZE1.091e-3055.36Catalase isozyme 3 OS=Zea mays GN=CAT3 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC01004H06SK Veg1 Citrus clementina cDNA clone C01004H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287118 ID=CX287118; Name=CX287118; organism=Citrus clementina; type=EST; length=508bp
GCATTTATTTTAAGGAACATCATGTTTATGAATTACAGGACCAACATGTT
TTTTTTAGTATTACAAAATAACACACCACCCGAAAACGAATTCGCATTCC
TTAAACTGCTGACGTCCTCTGTGTTTACTCCTTGCTAACTCTTTCTAAAT
CACTCAGCTCCGCATCACCATTAAATGTTAGGCCTCACATTCAGACGAGA
TGCCAACTTCTGACCCAGAGACTTGCAAGCCTGAGACCAGTATGAGATCC
ATATGTGGCGGATCTCATGGGTGACGCGTGGATCAGATAAAGCATCAACC
CATCTGCAGATGAATCGCTCTTGCCTGTCTGGTGCCCAAGATCGGTATCT
CTCTCCAGGTTGTTTGAAGTTGTTTTCCTTTGGAATTATGCACTTCTCGC
GCCTTCCGCCGCAGATTTCAGGAGGAGTTGGATGCATCTCAGCATGACGG
ACAGGATCATACCTTGAAGGGAAGTAATCGATCTCCTCATCCCTGTGCAT
GAAATTCA
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