CX287120

Overview
NameCX287120
Unique NameCX287120
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length485
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287120 vs. ExPASy Swiss-Prot
Match: LGMN_RAT (Legumain OS=Rattus norvegicus GN=Lgmn PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 7.398e-23
Identity = 44/72 (61.11%), Postives = 57/72 (79.17%), Query Frame = 3
Query:   57 WAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPK 272
            W V+VAGS+G+ NYRHQAD CHAYQ++ + G+ +E I+V MYDDIA +E NP PGV+IN P G ++Y GVPK
Sbjct:   32 WVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIIVMMYDDIANNEENPTPGVVINRPNGTDVYKGVPK 103          
BLAST of CX287120 vs. ExPASy Swiss-Prot
Match: LGMN_PONAB (Legumain OS=Pongo abelii GN=LGMN PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 9.663e-23
Identity = 44/72 (61.11%), Postives = 56/72 (77.78%), Query Frame = 3
Query:   57 WAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPK 272
            W V+VAGS+G+ NYRHQAD CHAYQ++ + G+ +E IVV MYDDIA  E NP PG++IN P G ++Y GVPK
Sbjct:   30 WVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIVVMMYDDIAYSEDNPTPGIVINRPNGTDVYQGVPK 101          
BLAST of CX287120 vs. ExPASy Swiss-Prot
Match: LGMN_MACFA (Legumain OS=Macaca fascicularis GN=LGMN PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 9.663e-23
Identity = 44/72 (61.11%), Postives = 56/72 (77.78%), Query Frame = 3
Query:   57 WAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPK 272
            W V+VAGS+G+ NYRHQAD CHAYQ++ + G+ +E IVV MYDDIA  E NP PG++IN P G ++Y GVPK
Sbjct:   30 WVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIVVMMYDDIAYSEDNPTPGIVINRPNGTDVYQGVPK 101          
BLAST of CX287120 vs. ExPASy Swiss-Prot
Match: LGMN_HUMAN (Legumain OS=Homo sapiens GN=LGMN PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 9.663e-23
Identity = 44/72 (61.11%), Postives = 56/72 (77.78%), Query Frame = 3
Query:   57 WAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPK 272
            W V+VAGS+G+ NYRHQAD CHAYQ++ + G+ +E IVV MYDDIA  E NP PG++IN P G ++Y GVPK
Sbjct:   30 WVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIVVMMYDDIAYSEDNPTPGIVINRPNGTDVYQGVPK 101          
BLAST of CX287120 vs. ExPASy Swiss-Prot
Match: LGMN_MOUSE (Legumain OS=Mus musculus GN=Lgmn PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.822e-21
Identity = 43/72 (59.72%), Postives = 55/72 (76.39%), Query Frame = 3
Query:   57 WAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPK 272
            W V+VAGS+G+ NYRHQAD CHAYQ++ + G+ +E I+V MYDDIA  E NP PGV+IN P G ++Y GV K
Sbjct:   32 WVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIIVMMYDDIANSEENPTPGVVINRPNGTDVYKGVLK 103          
BLAST of CX287120 vs. ExPASy Swiss-Prot
Match: LGMN_BOVIN (Legumain OS=Bos taurus GN=LGMN PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.380e-21
Identity = 42/72 (58.33%), Postives = 55/72 (76.39%), Query Frame = 3
Query:   57 WAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPK 272
            W V+VAGS+G+ NYRHQAD CHAYQ++ + G+ +E I+V MYDDIA  E NP PG++IN P G ++Y GV K
Sbjct:   30 WVVIVAGSNGWYNYRHQADACHAYQIVHRNGIPDEQIIVMMYDDIANSEDNPTPGIVINRPNGSDVYQGVLK 101          
BLAST of CX287120 vs. ExPASy Swiss-Prot
Match: HGLB_SCHMA (Hemoglobinase OS=Schistosoma mansoni PE=1 SV=3)

HSP 1 Score: 97.8265 bits (242), Expect = 2.631e-20
Identity = 43/71 (60.56%), Postives = 54/71 (76.06%), Query Frame = 3
Query:   54 RWAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGV 266
            +WAVLVAGS+GY NYRHQADVCHAY +LR  G+K EHI+  MYDDIA + +NP PG + N    ++ Y+GV
Sbjct:   37 KWAVLVAGSNGYPNYRHQADVCHAYHVLRSKGIKPEHIITMMYDDIAYNLMNPFPGKLFNDYNHKDWYEGV 107          
BLAST of CX287120 vs. ExPASy Swiss-Prot
Match: HGLB_SCHJA (Hemoglobinase OS=Schistosoma japonicum GN=HAEM PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.706e-19
Identity = 43/71 (60.56%), Postives = 54/71 (76.06%), Query Frame = 3
Query:   54 RWAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGV 266
            +WAVLVAGS+G+ NYRHQADVCHAY +L   G+K EHI+ FMYDDIA ++ NP PG I N  + ++ Y GV
Sbjct:   31 KWAVLVAGSNGFENYRHQADVCHAYHVLLSKGVKPEHIITFMYDDIAHNKENPFPGKIFNDYRHKDYYKGV 101          
The following BLAST results are available for this feature:
BLAST of CX287120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
LGMN_RAT7.398e-2361.11Legumain OS=Rattus norvegicus GN=Lgmn PE=2 SV=1[more]
LGMN_PONAB9.663e-2361.11Legumain OS=Pongo abelii GN=LGMN PE=2 SV=1[more]
LGMN_MACFA9.663e-2361.11Legumain OS=Macaca fascicularis GN=LGMN PE=2 SV=1[more]
LGMN_HUMAN9.663e-2361.11Legumain OS=Homo sapiens GN=LGMN PE=1 SV=1[more]
LGMN_MOUSE1.822e-2159.72Legumain OS=Mus musculus GN=Lgmn PE=1 SV=1[more]
LGMN_BOVIN2.380e-2158.33Legumain OS=Bos taurus GN=LGMN PE=1 SV=1[more]
HGLB_SCHMA2.631e-2060.56Hemoglobinase OS=Schistosoma mansoni PE=1 SV=3[more]
HGLB_SCHJA1.706e-1960.56Hemoglobinase OS=Schistosoma japonicum GN=HAEM PE=... [more]

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Properties
Property NameValue
Genbank descriptionC01004H08SK Veg1 Citrus clementina cDNA clone C01004H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287120 ID=CX287120; Name=CX287120; organism=Citrus clementina; type=EST; length=485bp
CGAGGGAGAAGCAAGAACCGCCGGCGGAGGAAGGTGGTGAGCCTGTTGGC
ACTAGATGGGCGGTTCTTGTGGCTGGATCATCTGGCTATGCAAATTACAG
GCATCAGGCCGATGTGTGCCATGCATATCAGTTGCTGAGGAAAGGTGGGT
TGAAAGAAGAGCACATAGTGGTGTTCATGTACGACGACATAGCCATGCAT
GAGCTTAATCCCAGGCCTGGTGTGATCATCAACCATCCACAAGGTGAAAA
TCTTTATGACGGTGTGCCGAAGTTGCTGAATCACAGTGGTTAATTTTCTA
AATCCGGGGGCGGAAGAATCCAGAAAGTTAATCAGTTGGCAGCCTGGCTT
TGGGCTACATCAGCTTTTGAGCAAACAAAGAAACTAACTTCCTTTTTTAT
TTTTTTATTTTTTTATTTTTATTTTTTAATTCCACTTTGCACATACGGCA
TATTCTATGTCACTCTTTCACATGTACAAACACAT
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