CX287125
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287125 vs. ExPASy Swiss-Prot
Match: G3P_SHEEP (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Ovis aries GN=GAPDH PE=2 SV=4) HSP 1 Score: 117.087 bits (292), Expect = 4.666e-26 Identity = 55/86 (63.95%), Postives = 68/86 (79.07%), Query Frame = 2 Query: 2 CRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYDNEWGYSNRVLDLIEHMA 259 CRL K A Y+++K +K ASEG LKGILGYT++ VVS DF D+ SS FDA AGI L+ F+KL+SWYDNE+GYSNRV+DL+ HMA Sbjct: 234 CRLEKPAKYDEIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVHMA 319
BLAST of CX287125 vs. ExPASy Swiss-Prot
Match: G3P_MUSPF (Glyceraldehyde-3-phosphate dehydrogenase OS=Mustela putorius furo GN=GAPDH PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 4.666e-26 Identity = 55/86 (63.95%), Postives = 68/86 (79.07%), Query Frame = 2 Query: 2 CRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYDNEWGYSNRVLDLIEHMA 259 CRL K A Y+D+K +K ASEG LKGILGYT++ VVS DF D+ SS FDA AGI L+ F+KL+SWYDNE+GYSNRV+DL+ +MA Sbjct: 245 CRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVYMA 330
BLAST of CX287125 vs. ExPASy Swiss-Prot
Match: G3P_MOUSE (Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus GN=Gapdh PE=1 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 4.666e-26 Identity = 55/86 (63.95%), Postives = 69/86 (80.23%), Query Frame = 2 Query: 2 CRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYDNEWGYSNRVLDLIEHMA 259 CRL K A Y+D+K +K ASEG LKGILGYT++ VVS DF +S SS FDA AGI L+ +F+KL+SWYDNE+GYSNRV+DL+ +MA Sbjct: 245 CRLEKPAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSNSHSSTFDAGAGIALNDNFVKLISWYDNEYGYSNRVVDLMAYMA 330
BLAST of CX287125 vs. ExPASy Swiss-Prot
Match: G3P_MASBA (Glyceraldehyde-3-phosphate dehydrogenase OS=Mastigamoeba balamuthi GN=GAPD PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 4.666e-26 Identity = 53/78 (67.95%), Postives = 66/78 (84.62%), Query Frame = 2 Query: 20 ASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYDNEWGYSNRVLDLIEH 253 A+YE++ A++ A+ G LKG+LGYTDE VVS+DFVG+ SSIFDAKAGI L +F+KLVSWYDNEWGYSNRV+DL+ H Sbjct: 257 ATYEEICNAVREAANGELKGVLGYTDEQVVSSDFVGEPMSSIFDAKAGIALDKTFVKLVSWYDNEWGYSNRVVDLLLH 334
BLAST of CX287125 vs. ExPASy Swiss-Prot
Match: G3P_CANFA (Glyceraldehyde-3-phosphate dehydrogenase OS=Canis familiaris GN=GAPDH PE=2 SV=3) HSP 1 Score: 117.087 bits (292), Expect = 4.666e-26 Identity = 55/86 (63.95%), Postives = 68/86 (79.07%), Query Frame = 2 Query: 2 CRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYDNEWGYSNRVLDLIEHMA 259 CRL K A Y+D+K +K ASEG LKGILGYT++ VVS DF D+ SS FDA AGI L+ F+KL+SWYDNE+GYSNRV+DL+ +MA Sbjct: 245 CRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVYMA 330
BLAST of CX287125 vs. ExPASy Swiss-Prot
Match: G3P_BOVIN (Glyceraldehyde-3-phosphate dehydrogenase OS=Bos taurus GN=GAPDH PE=1 SV=4) HSP 1 Score: 117.087 bits (292), Expect = 4.666e-26 Identity = 55/86 (63.95%), Postives = 68/86 (79.07%), Query Frame = 2 Query: 2 CRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYDNEWGYSNRVLDLIEHMA 259 CRL K A Y+++K +K ASEG LKGILGYT++ VVS DF D+ SS FDA AGI L+ F+KL+SWYDNE+GYSNRV+DL+ HMA Sbjct: 245 CRLEKPAKYDEIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVHMA 330
BLAST of CX287125 vs. ExPASy Swiss-Prot
Match: G3P_AJECA (Glyceraldehyde-3-phosphate dehydrogenase OS=Ajellomyces capsulata GN=GPD PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 4.666e-26 Identity = 55/90 (61.11%), Postives = 70/90 (77.78%), Query Frame = 2 Query: 2 CRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYDNEWGYSNRVLDLIEHMALVAA 271 C+ K +Y+ +K IK ASEG LKGILGY+++ +VS+D GDSRSSIFDA AGI L+ F+KL+SWYDNEWGYS RV+DLI ++A V A Sbjct: 246 CKTEKPVTYDQIKQTIKKASEGELKGILGYSEDALVSSDLNGDSRSSIFDASAGIALNDHFIKLISWYDNEWGYSRRVVDLIAYIAKVDA 335
BLAST of CX287125 vs. ExPASy Swiss-Prot
Match: G3P1_RHIRA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Rhizomucor racemosus GN=GPD1 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 6.094e-26 Identity = 54/86 (62.79%), Postives = 73/86 (84.88%), Query Frame = 2 Query: 8 LAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYDNEWGYSNRVLDLIEHMALV 265 L+KGASY+++K AIK ASE ++KG+LGYT + VVS+DFVG+ SS+FDA AGI L+ +F+KL++WYDNE+GYSNRV+DL+ H A V Sbjct: 248 LSKGASYDEIKQAIKKASETTMKGVLGYTSDAVVSSDFVGEVCSSVFDAAAGIQLTPTFVKLIAWYDNEYGYSNRVVDLLVHAAKV 333
BLAST of CX287125 vs. ExPASy Swiss-Prot
Match: G3P_RABIT (Glyceraldehyde-3-phosphate dehydrogenase OS=Oryctolagus cuniculus GN=GAPDH PE=1 SV=3) HSP 1 Score: 116.316 bits (290), Expect = 7.959e-26 Identity = 55/86 (63.95%), Postives = 67/86 (77.91%), Query Frame = 2 Query: 2 CRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYDNEWGYSNRVLDLIEHMA 259 CRL K A Y+D+K +K ASEG LKGILGYT++ VVS DF + SS FDA AGI L+ F+KL+SWYDNE+GYSNRV+DL+ HMA Sbjct: 245 CRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSATHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVHMA 330
BLAST of CX287125 vs. ExPASy Swiss-Prot
Match: G3P_RAT (Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus GN=Gapdh PE=1 SV=3) HSP 1 Score: 115.931 bits (289), Expect = 1.039e-25 Identity = 54/86 (62.79%), Postives = 69/86 (80.23%), Query Frame = 2 Query: 2 CRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYDNEWGYSNRVLDLIEHMA 259 CRL K A Y+D+K +K A+EG LKGILGYT++ VVS DF +S SS FDA AGI L+ +F+KL+SWYDNE+GYSNRV+DL+ +MA Sbjct: 245 CRLEKPAKYDDIKKVVKQAAEGPLKGILGYTEDQVVSCDFNSNSHSSTFDAGAGIALNDNFVKLISWYDNEYGYSNRVVDLMAYMA 330 The following BLAST results are available for this feature:
BLAST of CX287125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 241
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287125 ID=CX287125; Name=CX287125; organism=Citrus clementina; type=EST; length=502bpback to top |