CX287134
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_ECOK1 (Glycine cleavage system H protein OS=Escherichia coli O1:K1 / APEC GN=gcvH PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.733e-31 Identity = 65/128 (50.78%), Postives = 89/128 (69.53%), Query Frame = -1 Query: 144 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 524 S++ LKY+ HEW++ E TVGIT+HAQ+ LG++VFV+LPE GA+V G V ESVKA SD+ +P+SGE++ VN L+++P LVNS PY GW+ K+K S S+LESL+D AY E+E Sbjct: 2 SNIPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_ECO81 (Glycine cleavage system H protein OS=Escherichia coli O81 (strain ED1a) GN=gcvH PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.733e-31 Identity = 65/128 (50.78%), Postives = 89/128 (69.53%), Query Frame = -1 Query: 144 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 524 S++ LKY+ HEW++ E TVGIT+HAQ+ LG++VFV+LPE GA+V G V ESVKA SD+ +P+SGE++ VN L+++P LVNS PY GW+ K+K S S+LESL+D AY E+E Sbjct: 2 SNIPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_ECO45 (Glycine cleavage system H protein OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=gcvH PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.733e-31 Identity = 65/128 (50.78%), Postives = 89/128 (69.53%), Query Frame = -1 Query: 144 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 524 S++ LKY+ HEW++ E TVGIT+HAQ+ LG++VFV+LPE GA+V G V ESVKA SD+ +P+SGE++ VN L+++P LVNS PY GW+ K+K S S+LESL+D AY E+E Sbjct: 2 SNIPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_RAT (Glycine cleavage system H protein, mitochondrial OS=Rattus norvegicus GN=Gcsh PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.569e-31 Identity = 76/164 (46.34%), Postives = 103/164 (62.80%), Query Frame = -1 Query: 156 MALRMWAS--STANALRISCASKTP--------AFALSRCFSSVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKF 617 M+LR+ S + A +LRI+ AS P A R S++L K+ HEWV + + TVGI++ AQ+ LG+VV+ LPE G +K+ FG +ESVKA S++ SP+SGEV EVN L E PGLVN S YE+GWLIK+ S PS+L+ LM +AY K+ Sbjct: 1 MSLRVVRSVRAVACSLRIALASCPPRPWAPSAAAVRSLRTGSALLSVRKFTEKHEWVTAKDGIGTVGISNFAQEALGDVVYCSLPEVGTKLKKQEEFGALESVKAASELYSPLSGEVTEVNEALAENPGLVNKSCYEDGWLIKMTLSDPSELDELMSEEAYEKY 164
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_PARL1 (Glycine cleavage system H protein OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=gcvH PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.569e-31 Identity = 61/122 (50.00%), Postives = 88/122 (72.13%), Query Frame = -1 Query: 150 LDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCE 515 + +++ HEWV+ +G +AT+GITD+AQ+ LG+VVFVELPE G + G VVESVKA S+V SP+SGEVI+VN+ + +TP VN + +GW IK++ + PS+L+ LMD AY++F E Sbjct: 1 MSDIRFTDQHEWVRVDGDIATIGITDYAQEQLGDVVFVELPEVGKDIAAGDEAAVVESVKAASEVYSPVSGEVIDVNSDIEKTPAGVNENAMGDGWFIKLRLADPSELDKLMDEAAYSEFVE 122
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_SHESR (Glycine cleavage system H protein OS=Shewanella sp. (strain MR-7) GN=gcvH PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.661e-31 Identity = 68/128 (53.12%), Postives = 88/128 (68.75%), Query Frame = -1 Query: 144 SSVLDGLKYASSHEWV-KHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 524 S++ LKYASSHEW+ K E TVGIT+HAQ+ LG++VFVELPE G +V G V ESVKA SD+ +PISGEVI VN L ++P LVNS Y EGW +V PS S++++L+D + Y +EE Sbjct: 2 SNIPTELKYASSHEWIRKEEDGSYTVGITEHAQELLGDMVFVELPEVGDTVTAGNDCAVAESVKAASDIYAPISGEVIAVNEALEDSPELVNSDAYGEGWFFRVMPSDESEVDALLDAEGYQAVIDEE 129
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_ALTMD (Glycine cleavage system H protein OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=gcvH PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.661e-31 Identity = 66/128 (51.56%), Postives = 90/128 (70.31%), Query Frame = -1 Query: 144 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 524 S++ L+YA++HEWV+ EG V TVGI++HAQ LG++VFVELP+ G +V G V ESVKA SDV +PISGEV+EVN L ++P LVNS PY +GWL K+K +++E L+D + Y +EE Sbjct: 2 SNIPTDLRYAATHEWVRPEGDGVFTVGISEHAQGLLGDMVFVELPDVGDAVSTGDDICVAESVKAASDVYAPISGEVVEVNEDLEDSPELVNSDPYGDGWLFKIKADDAAEVEGLLDAEGYENSIDEE 129
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_SHESM (Glycine cleavage system H protein OS=Shewanella sp. (strain MR-4) GN=gcvH PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.088e-31 Identity = 68/128 (53.12%), Postives = 88/128 (68.75%), Query Frame = -1 Query: 144 SSVLDGLKYASSHEWV-KHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 524 S++ LKYASSHEW+ K E TVGIT+HAQ+ LG++VFVELPE G +V G V ESVKA SD+ +PISGEVI VN L ++P LVNS Y EGW +V PS S++++L+D + Y +EE Sbjct: 2 SNIPTELKYASSHEWIRKEEDGSYTVGITEHAQELLGDMVFVELPEVGDTVTAGDDCAVAESVKAASDIYAPISGEVIAVNEALEDSPELVNSDAYGEGWFFRVMPSDESEVDALLDAEGYQAVIDEE 129
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_SHESA (Glycine cleavage system H protein OS=Shewanella sp. (strain ANA-3) GN=gcvH PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.088e-31 Identity = 68/128 (53.12%), Postives = 88/128 (68.75%), Query Frame = -1 Query: 144 SSVLDGLKYASSHEWV-KHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 524 S++ LKYASSHEW+ K E TVGIT+HAQ+ LG++VFVELPE G +V G V ESVKA SD+ +PISGEVI VN L ++P LVNS Y EGW +V PS S++++L+D + Y +EE Sbjct: 2 SNIPTELKYASSHEWIRKEEDGSYTVGITEHAQELLGDMVFVELPEVGDTVTAGDDCAVAESVKAASDIYAPISGEVIAVNEALEDSPELVNSDAYGEGWFFRVMPSDESEVDALLDAEGYQAVIDEE 129
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_SHEON (Glycine cleavage system H protein OS=Shewanella oneidensis GN=gcvH PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.088e-31 Identity = 68/128 (53.12%), Postives = 88/128 (68.75%), Query Frame = -1 Query: 144 SSVLDGLKYASSHEWV-KHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 524 S++ LKYASSHEW+ K E TVGIT+HAQ+ LG++VFVELPE G +V G V ESVKA SD+ +PISGEVI VN L ++P LVNS Y EGW +V PS S++++L+D + Y +EE Sbjct: 2 SNIPTELKYASSHEWIRKEEDGSYTVGITEHAQELLGDMVFVELPEVGDTVTAGDDCAVAESVKAASDIYAPISGEVIAVNEALEDSPELVNSDAYGEGWFFRVMPSDESEVDALLDAEGYQAVIDEE 129 The following BLAST results are available for this feature:
BLAST of CX287134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 461
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287134 ID=CX287134; Name=CX287134; organism=Citrus clementina; type=EST; length=635bpback to top |