CX287134
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_LARHH (Glycine cleavage system H protein OS=Laribacter hongkongensis (strain HLHK9) GN=gcvH PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.038e-30 Identity = 65/123 (52.85%), Postives = 86/123 (69.92%), Query Frame = -1 Query: 159 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTK 524 S++ LKY +SHEWV+ EG V TVG+T HAQ+ LG++V++ELP G + +G G GVVESVKA SDV +PI+GEV+EVN L P VN+ PY GW K+K +P+D+ SL+D AY K Sbjct: 2 SNIPADLKYVASHEWVRDEGDGVVTVGVTFHAQELLGDIVYIELPAVGQVLAEGDGAGVVESVKAASDVYAPIAGEVLEVNADLESAPETVNADPYGAGWFFKLKLVNPADMASLLDAAAYEK 124
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_THET2 (Glycine cleavage system H protein OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=gcvH PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.356e-30 Identity = 60/119 (50.42%), Postives = 80/119 (67.23%), Query Frame = -1 Query: 144 YASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 500 Y +HEW EG VGITD+AQD LG+VV+VELPE G V++G VVESVK SD+ +P++GE++EVN L +TP LVN PY EGW+ ++KP DL+ L+D + Y + E E Sbjct: 9 YTKTHEWALPEGDTVLVGITDYAQDALGDVVYVELPEVGRVVEKGEAVAVVESVKTASDIYAPVAGEIVEVNLALEKTPELVNQDPYGEGWIFRLKPRDMGDLDELLDAEGYQEVLESE 127
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_SHESW (Glycine cleavage system H protein OS=Shewanella sp. (strain W3-18-1) GN=gcvH PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.356e-30 Identity = 67/128 (52.34%), Postives = 88/128 (68.75%), Query Frame = -1 Query: 144 SSVLDGLKYASSHEWV-KHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 524 S++ LKYASSHEW+ K E TVGIT+HAQ+ LG++VFVELPE G +V G V ESVKA SD+ +PISGEVI VN L ++P LVNS Y EGW +V PS +++++L+D + Y +EE Sbjct: 2 SNIPTELKYASSHEWIRKEEDGSYTVGITEHAQELLGDMVFVELPEVGDTVTAGDDCAVAESVKAASDIYAPISGEVIAVNEALEDSPELVNSDAYGEGWFFRVMPSDETEVDALLDAEGYQAVIDEE 129
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_SHEPC (Glycine cleavage system H protein OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=gcvH PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.356e-30 Identity = 67/128 (52.34%), Postives = 88/128 (68.75%), Query Frame = -1 Query: 144 SSVLDGLKYASSHEWV-KHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 524 S++ LKYASSHEW+ K E TVGIT+HAQ+ LG++VFVELPE G +V G V ESVKA SD+ +PISGEVI VN L ++P LVNS Y EGW +V PS +++++L+D + Y +EE Sbjct: 2 SNIPTELKYASSHEWIRKEEDGSYTVGITEHAQELLGDMVFVELPEVGDTVTAGDDCAVAESVKAASDIYAPISGEVIAVNEALEDSPELVNSDAYGEGWFFRVMPSDETEVDALLDAEGYQAVIDEE 129
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_PSEA6 (Glycine cleavage system H protein OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=gcvH PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.356e-30 Identity = 63/128 (49.22%), Postives = 88/128 (68.75%), Query Frame = -1 Query: 144 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 524 S++ L+YA++HEWV+ EG TVGI++HAQ+ LG++VFVELP+ GA+V G V ESVKA SDV +PI GE++ VN L ++P LVNS PY +GWL ++K ++E L+D + Y EEE Sbjct: 2 SNIPSDLRYATTHEWVRPEGDGTFTVGISEHAQELLGDMVFVELPDVGATVSAGDDIAVAESVKAASDVYAPIGGEIVGVNEDLEDSPELVNSDPYGDGWLFRIKADDADEVEGLLDAEGYENSIEEE 129
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_MARMS (Glycine cleavage system H protein OS=Marinomonas sp. (strain MWYL1) GN=gcvH PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.356e-30 Identity = 64/122 (52.46%), Postives = 85/122 (69.67%), Query Frame = -1 Query: 162 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYT 524 S++ + LKYA SHEWV G TVGITDHAQD LG+VV+VELPE G V F +VESVKA SD+ +P++GEVIEVN L + P L+N +P+E W+ K+K S+ +DL+ L+D Y+ Sbjct: 2 STIPENLKYADSHEWVLDNGDGTVTVGITDHAQDLLGDVVYVELPEVGTEVTATEQFSLVESVKAASDIYAPVNGEVIEVNDALNDAPELINEAPFEGAWIAKIKLSNAADLDKLLDAAGYS 123
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_STAES (Glycine cleavage system H protein OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gcvH PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.771e-30 Identity = 60/119 (50.42%), Postives = 86/119 (72.27%), Query Frame = -1 Query: 147 KYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 503 KY+ HEWVK E +VATVGIT++AQ+ LG++VFVELPET + +G FG VESVK S++ +PISG+++EVN +L ++P VN SPYE+ W++K++ S S LE L+ Y++ E Sbjct: 8 KYSKEHEWVKIENNVATVGITEYAQNELGDIVFVELPETDDELNEGDTFGSVESVKTVSELYAPISGKIVEVNEELEDSPEFVNESPYEKAWMVKIEISDDSQLEELLSADQYSEMIGE 126
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_RABIT (Glycine cleavage system H protein, mitochondrial OS=Oryctolagus cuniculus GN=GCSH PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.771e-30 Identity = 72/167 (43.11%), Postives = 99/167 (59.28%), Query Frame = -1 Query: 156 MALRMWASSTANALRISCAS-------------KTPAFALSRCFSSVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKF 617 MALR+ S A A + AS + A R ++L K+ HEW+ E + TVGI++ AQ+ LG+VV+ LPE G +K+ FG +ESVKA S++ SP+SGEV E+N L E PGLVN S YE+GWLIK+ S+PS+L+ LM +AY K+ Sbjct: 1 MALRVVRSLRAAACSLFAASAPAAPCSPLPWRLRAGAVRTLRTGPALLSVRKFTEKHEWITTENGIGTVGISNFAQEALGDVVYCSLPEVGTKLKKQDEFGALESVKAASELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEKY 167
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_KLEP3 (Glycine cleavage system H protein OS=Klebsiella pneumoniae (strain 342) GN=gcvH PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.771e-30 Identity = 63/128 (49.22%), Postives = 89/128 (69.53%), Query Frame = -1 Query: 144 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 524 S+V LKY+ HEW++ E TVGIT+HAQ+ LG++VFV+LPE GA+V+ G V ESVKA SD+ +PISGE++ VN +L ++P LVNS PY +GW+ K+K S + + +L+D AY E+E Sbjct: 2 SNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVEAGADCAVAESVKAASDIYAPISGEIVAVNEELNDSPELVNSDPYSDGWIFKIKASDEAQVAALLDATAYEALLEDE 129
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_ALKOO (Glycine cleavage system H protein OS=Alkaliphilus oremlandii (strain OhILAs) GN=gcvH PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.771e-30 Identity = 65/122 (53.28%), Postives = 85/122 (69.67%), Query Frame = -1 Query: 144 GLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 509 GL Y+ HEWVK EG+ A +GITD AQ LGE+VFVELPE + QG F VVESVKA SD SP+SG+V+EVN +L P L+N + W+IKV+ ++PS+LE L+ + Y +FCE+E Sbjct: 6 GLLYSKDHEWVKVEGNEAYIGITDFAQHALGEIVFVELPEVDDEIAQGDAFSVVESVKAASDAYSPVSGKVLEVNEELDGAPELLNEDAF-ANWIIKVELTNPSELEGLLSDKEYAEFCEKE 126 The following BLAST results are available for this feature:
BLAST of CX287134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 461
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287134 ID=CX287134; Name=CX287134; organism=Citrus clementina; type=EST; length=635bpback to top |