CX287134
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_STAEQ (Glycine cleavage system H protein OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gcvH PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.313e-30 Identity = 59/119 (49.58%), Postives = 86/119 (72.27%), Query Frame = -1 Query: 147 KYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 503 KY+ HEWVK E +VAT+GIT++AQ+ LG++VFVELPET + +G FG VESVK S++ +PISG+++EVN +L ++P VN SPYE+ W++K++ S S LE L+ Y++ E Sbjct: 8 KYSKEHEWVKIENNVATIGITEYAQNELGDIVFVELPETDDELNEGDTFGSVESVKTVSELYAPISGKIVEVNEELEDSPEFVNESPYEKAWMVKIEISDDSQLEELLSADQYSEMIGE 126
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_SERP5 (Glycine cleavage system H protein OS=Serratia proteamaculans (strain 568) GN=gcvH PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.313e-30 Identity = 68/127 (53.54%), Postives = 89/127 (70.08%), Query Frame = -1 Query: 147 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 524 S+V LKYASSHEWV+ EG+ V TVGIT+HAQ+ LG++VFV+LPE G +V G V ESVKA SD+ +PISGE++ VN +L +P LVNS PY EG+L ++K S +L L+D AY +E Sbjct: 2 SNVPTELKYASSHEWVRSEGNGVYTVGITEHAQELLGDMVFVDLPEVGRTVAAGEDCAVAESVKAASDIYAPISGEIVAVNGELESSPELVNSGPYAEGFLFQIKASDEGELAKLLDATAYQASIDE 128
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_SACD2 (Glycine cleavage system H protein OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=gcvH PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.313e-30 Identity = 66/129 (51.16%), Postives = 83/129 (64.34%), Query Frame = -1 Query: 141 SSVLDGLKYASSHEWVK-HEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEEN 524 S + LKY SHEW + E T+GITDHAQ+ LG+VVFVE+PE G+ V G GVVESVKA SD+ SP+SGEVI VN L + P VNSSPY++GW KVKP +LE + + Y E ++ Sbjct: 2 SELRSELKYLESHEWARVEEDGTVTIGITDHAQEALGDVVFVEVPEVGSQVSIGEEAGVVESVKAASDIYSPVSGEVIAVNEALEDAPETVNSSPYDDGWFFKVKPDDLDELEKALSMEDYKAAIESDD 130
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_PELUB (Glycine cleavage system H protein OS=Pelagibacter ubique GN=gcvH PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.313e-30 Identity = 60/123 (48.78%), Postives = 84/123 (68.29%), Query Frame = -1 Query: 138 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEENA 506 +KY+ HEW+K +G A VGIT HA + LG++VFVELPE G+SV + G GVVES KA SD+ +P+SGE+IE N + + P VNS P E W K+K + S+++SLM+ + Y KF +E + Sbjct: 4 VKYSKEHEWIKLDGDTAVVGITQHATEMLGDIVFVELPEIGSSVVKDGNAGVVESTKAASDIYTPVSGEIIENNQAIVDDPAKVNSDPENEAWFFKLKITDKSEMDSLMNKEEYEKFSKESGS 126
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_MAGSM (Glycine cleavage system H protein OS=Magnetococcus sp. (strain MC-1) GN=gcvH PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.313e-30 Identity = 61/124 (49.19%), Postives = 84/124 (67.74%), Query Frame = -1 Query: 150 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCE 521 S+ L Y HEW++ EG +GIT A D LG+VVFVELP+ +++ GG FGVVESVKA SD+ SPI+G+VI N L E P LVN PY +GW++++KP P+ +++L+ QAYT + E Sbjct: 2 SIPQELYYTKDHEWLRKEGDEVVIGITRFAADQLGDVVFVELPQVEDTLQMGGTFGVVESVKAASDLFSPITGQVIATNPDLAEAPELVNEDPYGKGWMLRLKPEDPAQMDALLTAQAYTAWLE 125
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_KLEP7 (Glycine cleavage system H protein OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=gcvH PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.313e-30 Identity = 63/128 (49.22%), Postives = 89/128 (69.53%), Query Frame = -1 Query: 144 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 524 S+V LKY+ HEW++ E TVGIT+HAQ+ LG++VFV+LPE GA+V+ G V ESVKA SD+ +PISGE++ VN +L ++P LVNS PY +GW+ K+K S + + +L+D AY E+E Sbjct: 2 SNVPAELKYSKEHEWLRKEAEGTYTVGITEHAQELLGDMVFVDLPEVGATVEAGADCAVAESVKAASDIYAPISGEIVAVNEELNDSPELVNSDPYTDGWIFKIKASDEAQVAALLDAAAYEALLEDE 129
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_BACSU (Glycine cleavage system H protein OS=Bacillus subtilis GN=gcvH PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.313e-30 Identity = 62/126 (49.21%), Postives = 85/126 (67.46%), Query Frame = -1 Query: 144 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 521 S+ L+Y+ HEWVK EG A +GIT AQ LG++VFVELPE GA +K FG VESVK S++ +PI+G V+EVN L ++P VN SPYE+ W+I V+PS S++E LM + Y + +E+ Sbjct: 2 SIPKDLRYSGEHEWVKVEGEKARIGITHFAQSELGDIVFVELPEVGAEIKADEPFGSVESVKTVSELYAPINGTVVEVNEDLDDSPEFVNESPYEKAWMIVVEPSDASEIEKLMTAEQYEEMTQED 127
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_BACFN (Glycine cleavage system H protein OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=gcvH PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.313e-30 Identity = 58/114 (50.88%), Postives = 84/114 (73.68%), Query Frame = -1 Query: 165 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAY 506 +KY + HEW++ EG VA VGITD+AQ+ LG++VFV++P G +++ G FG +E VK SD+ P++GEV+E N L E P LVN PY EGWLIK+KP++ +DL++L+D + Y Sbjct: 7 VKYTNEHEWIRLEGDVAYVGITDYAQEQLGDIVFVDIPTEGETLEAGEVFGTIEVVKTISDLFLPVAGEVVEQNPALEENPELVNKDPYGEGWLIKMKPANAADLDNLLDAEGY 120
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_MYXXD (Glycine cleavage system H protein OS=Myxococcus xanthus (strain DK 1622) GN=gcvH PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.021e-30 Identity = 55/115 (47.83%), Postives = 84/115 (73.04%), Query Frame = -1 Query: 162 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYT 506 LKY HEW + +G+ VG+T HAQ+ LG+VV+VELP+ G++V +G FGV+ES KA S++ SP++G+V++VN L++ P VN+ PY GW+++++PS P ++ LMD AYT Sbjct: 9 LKYTREHEWARVQGTSVVVGVTQHAQESLGDVVYVELPKVGSTVTEGKQFGVIESTKAVSELYSPLTGKVVKVNDGLSDNPSTVNTDPYGAGWIVEIEPSDPKQVDGLMDAAAYT 123
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_CITK8 (Glycine cleavage system H protein OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=gcvH PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.021e-30 Identity = 63/128 (49.22%), Postives = 89/128 (69.53%), Query Frame = -1 Query: 144 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 524 S+V LKY+ HEW++ E TVGIT+HAQ+ LG++VFV+LP+ GA+V G V ESVKA SD+ +P+SGE++ VN L+++P LVNS PY GW+ K+K S S+++SL+D AY E+E Sbjct: 2 SNVPVELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPDVGATVAAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESEIDSLLDATAYEALLEDE 129 The following BLAST results are available for this feature:
BLAST of CX287134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 461
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287134 ID=CX287134; Name=CX287134; organism=Citrus clementina; type=EST; length=635bpback to top |