CX287134
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_PHEZH (Glycine cleavage system H protein OS=Phenylobacterium zucineum (strain HLK1) GN=gcvH PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.499e-29 Identity = 60/117 (51.28%), Postives = 79/117 (67.52%), Query Frame = -1 Query: 156 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKF 506 +++ HEWV +G VAT+GIT HA + LG+VVFVE+PE G VK G F VVESVKA SDV +P++GEV+E N L+ P VN+ P GW KV+ + P++L+ LMD AY F Sbjct: 1 MRFTKDHEWVALDGDVATIGITAHAAEQLGDVVFVEVPEVGRQVKAGDAFAVVESVKAASDVYAPVTGEVVEANEALSGAPETVNAEPEAGGWFAKVRVADPAELDGLMDKAAYDAF 117
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_HALLT (Probable glycine cleavage system H protein OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=gcvH PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.499e-29 Identity = 60/118 (50.85%), Postives = 78/118 (66.10%), Query Frame = -1 Query: 165 VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAY 518 V D +Y SHEWV G +G++D AQD LG+VVFVELPE G + G FGVVES+KA SD+ +P+SGEV+ VN +L + P LVN PY +GWL++V+P D E L+D Y Sbjct: 5 VPDDRRYLESHEWVTTGGDTVRIGVSDFAQDELGDVVFVELPEAGDEITAGEAFGVVESIKAVSDLYAPVSGEVVAVNEELFDRPELVNEDPYGDGWLLEVEPVEGGDAEGLLDADEY 122
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_CAUCR (Glycine cleavage system H protein OS=Caulobacter crescentus GN=gcvH PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.499e-29 Identity = 64/117 (54.70%), Postives = 81/117 (69.23%), Query Frame = -1 Query: 156 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKF 506 +++ HEWV EG VATVGIT +A + LG+VVFVE PE G VKQG G VVESVKA SDV +P+SGEVIE N +L P VN+ P GW K+K ++P++L++LMD AY F Sbjct: 1 MRFTKDHEWVIVEGDVATVGITAYAAEQLGDVVFVETPEAGKVVKQGEGLAVVESVKAASDVYAPVSGEVIEGNGELAGAPETVNALPESGGWFAKIKLANPAELDALMDRDAYEAF 117
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_CAUCN (Glycine cleavage system H protein OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=gcvH PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.499e-29 Identity = 64/117 (54.70%), Postives = 81/117 (69.23%), Query Frame = -1 Query: 156 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKF 506 +++ HEWV EG VATVGIT +A + LG+VVFVE PE G VKQG G VVESVKA SDV +P+SGEVIE N +L P VN+ P GW K+K ++P++L++LMD AY F Sbjct: 1 MRFTKDHEWVIVEGDVATVGITAYAAEQLGDVVFVETPEAGKVVKQGEGLAVVESVKAASDVYAPVSGEVIEGNGELAGAPETVNALPESGGWFAKIKLANPAELDALMDRDAYEAF 117
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_BREBN (Glycine cleavage system H protein OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=gcvH PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.499e-29 Identity = 60/120 (50.00%), Postives = 86/120 (71.67%), Query Frame = -1 Query: 147 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 506 L+Y+ HEWV+ EG+ A +GIT AQ LG++VFVELPE GA+++Q FG VESVK S++ +P++G+V+EVN +L + P LVNSSPYE+ W+I V+ S ++L+ LMD Y +E Sbjct: 7 LRYSEEHEWVRVEGNKAYIGITSFAQAELGDIVFVELPEVGATIQQDEPFGSVESVKTVSELYAPVTGKVVEVNGELEDAPELVNSSPYEQAWMIVVELSDTAELDKLMDADKYEAMVKE 126
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_BOVIN (Glycine cleavage system H protein, mitochondrial OS=Bos taurus GN=GCSH PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.499e-29 Identity = 62/122 (50.82%), Postives = 84/122 (68.85%), Query Frame = -1 Query: 156 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKF 521 ++L K+ HEWV E V TVGI++ AQ+ LG+VV+ LPE G + + FG +ESVKA S++ SP+SGEV E+N L E PGLVN S YE+GWLIK+ S+PS+L+ LM +AY K+ Sbjct: 46 ALLSVRKFTEKHEWVTTENGVGTVGISNFAQEALGDVVYCSLPEVGTKLNKQEEFGALESVKAASELYSPLSGEVTEINKALAENPGLVNKSCYEDGWLIKMTFSNPSELDELMSEEAYEKY 167
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_THEP3 (Glycine cleavage system H protein OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=gcvH PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.958e-29 Identity = 62/125 (49.60%), Postives = 84/125 (67.20%), Query Frame = -1 Query: 144 VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 518 V++GL Y+ HEWVK EG A +GITD+AQ LG +V++ELPE GA + G GVVESVKA SDV +P+ G+V+EVN + + P LVN+ PY W+ V+ S L++LM + Y KF +EE Sbjct: 3 VIEGLYYSKDHEWVKVEGDKAYIGITDYAQHSLGNIVYIELPEVGAELSAGDVLGVVESVKAASDVYTPVDGKVLEVNNAIVDDPSLVNNDPY-GSWMALVELKDKSQLDNLMTAEEYKKFLDEE 126
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_CELJU (Glycine cleavage system H protein OS=Cellvibrio japonicus (strain Ueda107) GN=gcvH PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.958e-29 Identity = 64/128 (50.00%), Postives = 82/128 (64.06%), Query Frame = -1 Query: 144 SSVLDGLKYASSHEWVK-HEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 524 S + LKY SSHEW + E T+GITDHAQD LG+VV+VE PE G+ V G GVVESVKA SD+ S +SG+V+ VN L + P VNSSPY+EGW +V+P S+L+ + Y + E E Sbjct: 2 SDIRKELKYLSSHEWARVEEDGTVTIGITDHAQDALGDVVYVETPEVGSRVSLGEEAGVVESVKAASDIYSLVSGKVVAVNELLQDAPETVNSSPYDEGWFFRVQPDDVSELDEALSADEYRELLESE 129
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_BURXL (Glycine cleavage system H protein OS=Burkholderia xenovorans (strain LB400) GN=gcvH PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.958e-29 Identity = 63/122 (51.64%), Postives = 86/122 (70.49%), Query Frame = -1 Query: 159 SVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTK 521 S+ LKY SHEWV+ E TVGITDHAQ+ LG++VF E+ E G +V G V+ESVKA SD+ +P+SGE+IE N+ + +TP LVNS+PY E WL K+KP++ + L+ L+D AY+K Sbjct: 2 SIPADLKYTESHEWVRTEADGTLTVGITDHAQEALGDIVFFEVQELGKTVSAGDTVAVIESVKAASDIYAPVSGEIIEANSAVADTPDLVNSTPY-ESWLFKIKPAADAALDRLIDADAYSK 122
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_BACLD (Glycine cleavage system H protein OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=gcvH PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.958e-29 Identity = 60/121 (49.59%), Postives = 82/121 (67.77%), Query Frame = -1 Query: 144 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 506 L+Y+ HEWVK EG +GITD AQ LG++VFVELPE G +K FG VESVK S++ +PI+G+V+EVN L ++P VN SPYE+ W+I V+PS S++E+LM Y +E+ Sbjct: 7 LRYSEEHEWVKTEGDKVRIGITDFAQSELGDIVFVELPEVGDEIKADEPFGSVESVKTVSELYAPINGKVVEVNEDLEDSPEFVNESPYEKAWMIVVEPSDASEIENLMTAGQYEDMIKED 127 The following BLAST results are available for this feature:
BLAST of CX287134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 461
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287134 ID=CX287134; Name=CX287134; organism=Citrus clementina; type=EST; length=635bpback to top |