CX287134
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_HALS3 (Probable glycine cleavage system H protein OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=gcvH PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.226e-24 Identity = 57/118 (48.31%), Postives = 78/118 (66.10%), Query Frame = -1 Query: 165 VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAY 518 V D L+Y SHEW+ + + VGI++ AQD LG+VVFVELP G ++ Q GVVES+KA SD+ +P+SGEV VN LT P LVN +P+ +GWL+++ S DLE+ +D Y Sbjct: 5 VPDDLQYLESHEWI--DPATGRVGISEFAQDELGDVVFVELPSVGDALDQHDELGVVESIKAVSDLYAPVSGEVTAVNDALTNEPELVNEAPFGDGWLVEIDFDS-DDLEATLDSDDY 119
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_DESVV (Glycine cleavage system H protein OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=gcvH PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.226e-24 Identity = 55/121 (45.45%), Postives = 78/121 (64.46%), Query Frame = -1 Query: 144 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 506 LKY+ +HEW++ EG A +GIT AQ+ LG++ FV+LP G ++ G VESVKA S++ +P++GEVI VN L P LVN SPY EGW+++VK ++ E L+D AY + E Sbjct: 7 LKYSKTHEWIRIEGDEAVIGITHFAQEQLGDLTFVDLPGVGDTLDVEQEMGSVESVKAASELYAPVAGEVIAVNDALASAPELVNQSPYTEGWMLRVKLAATP--EDLLDATAYGELVASE 125
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_DESVH (Glycine cleavage system H protein OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=gcvH PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.226e-24 Identity = 55/121 (45.45%), Postives = 78/121 (64.46%), Query Frame = -1 Query: 144 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 506 LKY+ +HEW++ EG A +GIT AQ+ LG++ FV+LP G ++ G VESVKA S++ +P++GEVI VN L P LVN SPY EGW+++VK ++ E L+D AY + E Sbjct: 7 LKYSKTHEWIRIEGDEAVIGITHFAQEQLGDLTFVDLPGVGDTLDVEQEMGSVESVKAASELYAPVAGEVIAVNDALASAPELVNQSPYTEGWMLRVKLAATP--EDLLDATAYGELVASE 125
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_CYAP7 (Glycine cleavage system H protein OS=Cyanothece sp. (strain PCC 7424) GN=gcvH PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.226e-24 Identity = 53/124 (42.74%), Postives = 81/124 (65.32%), Query Frame = -1 Query: 144 DGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSP-SDLESLMDPQAYTKFCEEE 512 D L+Y SHE+V+ +G +AT+GI+ A + LG++VF+ELPE G +V+ G FG +ESVKA D+ P+SG VIE N + ++P L+ PY EGWL+K++ +P ++L+ + Y E E Sbjct: 7 DDLRYLDSHEYVRLDGEIATIGISAFAIEQLGDIVFLELPEVGEAVEVGESFGHIESVKAVEDLYPPVSGTVIERNEAMIDSPELIGDDPYGEGWLLKLRVVNPDNELDDTLTADEYRSQVEGE 130
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_SYNS9 (Glycine cleavage system H protein OS=Synechococcus sp. (strain CC9902) GN=gcvH PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.519e-24 Identity = 51/114 (44.74%), Postives = 78/114 (68.42%), Query Frame = -1 Query: 162 KYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYT 503 ++A SHE+ +G + VGI+ A D LG++VFV+LP+ GAS+ +G FG VESVKA D+ +PI+GEV+E N + +P + + P+ GWL+ V+PS P+ LE+L+D Y+ Sbjct: 10 RFADSHEYAHLDGELIRVGISAFAVDQLGDIVFVDLPDVGASLDKGTSFGSVESVKAVEDMYAPIAGEVVERNEAVLASPEELQNDPHGAGWLLVVRPSDPAQLETLLDSATYS 123
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_SYNPX (Glycine cleavage system H protein OS=Synechococcus sp. (strain WH8102) GN=gcvH PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.519e-24 Identity = 50/113 (44.25%), Postives = 77/113 (68.14%), Query Frame = -1 Query: 165 KYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAY 503 ++A SHE+ +G + VGI+ A D LG++VFV+LP+ G S+ +G FG VESVKA D+ +P++GEV++ N + +P + + P+ EGWL+ ++PS PS LE+LMD Y Sbjct: 10 RFADSHEYANADGELVRVGISAFAVDQLGDIVFVDLPDVGDSLDKGATFGSVESVKAVEDMYAPVAGEVVQRNEAVLASPEELQNDPHGEGWLLVLRPSDPSQLEALMDAGTY 122
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_RHIE6 (Glycine cleavage system H protein OS=Rhizobium etli (strain CIAT 652) GN=gcvH PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.519e-24 Identity = 52/114 (45.61%), Postives = 72/114 (63.16%), Query Frame = -1 Query: 165 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAY 506 LK+ + HEW++ +G VATVGIT +A + LG++VFVELPE G S + VESVKA S+V P+ GE+ VN + P L+NS P GW K+K + +D + L+D AY Sbjct: 2 LKFTAEHEWLELDGDVATVGITTYAVEQLGDLVFVELPEVGKSFSKNDDAATVESVKAASEVYCPLDGEITAVNDAIVADPSLINSDPQGAGWFFKLKLKNRADADGLLDEAAY 115
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_BORA1 (Glycine cleavage system H protein OS=Bordetella avium (strain 197N) GN=gcvH PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.519e-24 Identity = 53/113 (46.90%), Postives = 74/113 (65.49%), Query Frame = -1 Query: 165 KYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAY 503 KY +SHEWVK EG V VGIT++AQD LG++VFV GA++K G GVVESVKA SD+ +P+ G ++ N +L P L+N S + W+ K+KP + +D + L+D Y Sbjct: 8 KYTTSHEWVKAEGDVFVVGITENAQDQLGDLVFVGDVSVGANLKAGETAGVVESVKAASDIYAPVDGVIVAFNDELEANPNLINESAF-TAWIFKIKPLNAADADKLLDAAGY 119
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_ACICJ (Glycine cleavage system H protein OS=Acidiphilium cryptum (strain JF-5) GN=gcvH PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.519e-24 Identity = 54/116 (46.55%), Postives = 72/116 (62.07%), Query Frame = -1 Query: 156 KYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKF 503 +++ HEWV+ +G VATVGITDHAQ LG+VVFVELPETG V G VVESVKA SDV +P++G V E N L + PG+VN+ W ++ + ++L+ Y F Sbjct: 5 RFSKDHEWVRLDGDVATVGITDHAQSALGDVVFVELPETGRHVDAGEACAVVESVKAASDVYAPLAGTVTEANGALADDPGMVNAQAESGAWFFRMTLDDRAAFDALLTADDYQAF 120
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_STRAW (Glycine cleavage system H protein OS=Streptomyces avermitilis GN=gcvH PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.208e-24 Identity = 54/118 (45.76%), Postives = 80/118 (67.80%), Query Frame = -1 Query: 156 LKYASSHEWVKH-EGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKF 506 L+Y+ HEW+ E V+TVGIT+HA + LG+VV+V+LPE G +V G G +ES K+ SD+ SP++GEV+E N + + P LVNS+P+E GWL KV+ + + + L+ YT+F Sbjct: 7 LRYSKEHEWLSGAEDGVSTVGITEHAANALGDVVYVQLPEVGDTVTAGETCGELESTKSVSDLYSPVTGEVVEANQDVVDDPSLVNSAPFEGGWLFKVRVA--EEPKDLLSADEYTEF 122 The following BLAST results are available for this feature:
BLAST of CX287134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 461
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287134 ID=CX287134; Name=CX287134; organism=Citrus clementina; type=EST; length=635bpback to top |