CX287134
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_SYNPW (Glycine cleavage system H protein OS=Synechococcus sp. (strain WH7803) GN=gcvH PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.606e-23 Identity = 47/116 (40.52%), Postives = 74/116 (63.79%), Query Frame = -1 Query: 165 DGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAY 512 D +YA SHE+ + + +G++ +A D LG++VFV+LPE GA + +G FG VESVKA ++ +P+SG V++ N L P + + P+ EGWL+ ++P PS ++ LMD Y Sbjct: 7 DSYRYADSHEYAWQDAAAVRIGLSAYAVDQLGDIVFVDLPEVGAELNRGSSFGTVESVKAVEEMYAPLSGVVLQRNEALLANPEELQNDPHGEGWLLVIQPGDPSQMDQLMDAATY 122
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_PYRHO (Probable glycine cleavage system H protein OS=Pyrococcus horikoshii GN=gcvH PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.097e-23 Identity = 56/123 (45.53%), Postives = 79/123 (64.23%), Query Frame = -1 Query: 156 VLDGLKYASSHEWVKH-EGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSS-PSDLESLMDPQAYTKF 518 V +GL Y HEW + E VGITD+AQ LG++ +VELPE G V +G VESVKA S+V +P+SGEVIEVN +L+++P +N PY W+ K+KP + +L+ LMD + Y ++ Sbjct: 13 VKEGLYYTKDHEWAQVLEDGTVLVGITDYAQKELGDLAYVELPEVGKEVSKGDVLCEVESVKAVSEVYAPVSGEVIEVNEELSDSPEKINEDPY-GAWIAKIKPKNLEEELKELMDAEKYAEY 134
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_PROVI (Glycine cleavage system H protein OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=gcvH PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.097e-23 Identity = 54/118 (45.76%), Postives = 78/118 (66.10%), Query Frame = -1 Query: 159 LKYASSHEWVK--HEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTK 506 L+Y HEWVK +G+ A VGITD AQ LG++VFVEL G + + FG VE+VK +D+ +P++G ++E+N L + VN PY EGW++K+K + PS L++LMD AYT+ Sbjct: 7 LRYTKDHEWVKLLADGATALVGITDFAQSELGDIVFVELKPEGTVLGEQEIFGTVEAVKTVADLFAPVAGTILELNGVL-DAAETVNQDPYGEGWMVKMKVADPSSLDALMDAAAYTE 123
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_MYCA9 (Glycine cleavage system H protein OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=gcvH PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.097e-23 Identity = 54/119 (45.38%), Postives = 75/119 (63.03%), Query Frame = -1 Query: 165 LKYASSHEWVKHEGSVAT-VGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLES----LMDPQAY 506 L Y HEWV+ G +GITD+AQ LG+VVFV+LP+ G+ + G FG VES K+ SD+ +PI+ +VI N L P LVNS PY EGWL+ ++ +S +DL++ L+D Y Sbjct: 8 LHYTEEHEWVRRTGDTTVRIGITDYAQSQLGDVVFVQLPDVGSELTAGSTFGEVESTKSVSDLFAPITAKVIAANGDLDSDPQLVNSDPYGEGWLVDLEAASAADLDAALNDLLDASGY 126
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_CORJK (Glycine cleavage system H protein OS=Corynebacterium jeikeium (strain K411) GN=gcvH PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.097e-23 Identity = 55/116 (47.41%), Postives = 73/116 (62.93%), Query Frame = -1 Query: 165 YASSHEWVKH----EGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAY 500 Y+ HEWV EG VGIT A + LG++VFVELPE G+ V+ G FG VES K+ SD+ +P+SGEV+ VN L + GL+N PY EGWL +VK + + LM+ +AY Sbjct: 10 YSEEHEWVNTSAVVEGETVRVGITHIAAEALGDIVFVELPEVGSEVEAGEAFGEVESTKSVSDIYAPVSGEVVAVNEALEDNAGLINEDPYGEGWLYEVKVTEAGE---LMEAEAY 122
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_UNCTG (Glycine cleavage system H protein OS=Uncultured termite group 1 bacterium phylotype Rs-D17 GN=gcvH PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.739e-23 Identity = 51/114 (44.74%), Postives = 76/114 (66.67%), Query Frame = -1 Query: 165 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAY 506 LKY +HEWVK +G+ A VGITD AQ + +VV VELPE G VK+ VVESVK+ D+ SP+SG+++EVN + +P ++N SPYE G+L ++ + ++ L++ +Y Sbjct: 7 LKYTKTHEWVKIDGNKAKVGITDFAQYEITDVVHVELPEIGKQVKKAQPAAVVESVKSAFDIYSPLSGKILEVNDSVLRSPEVINQSPYENGYLFIIEFTDEKEIADLLEADSY 120
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_SYNY3 (Glycine cleavage system H protein OS=Synechocystis sp. (strain PCC 6803) GN=gcvH PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.739e-23 Identity = 58/113 (51.33%), Postives = 74/113 (65.49%), Query Frame = -1 Query: 180 DGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPY-EEGWLIKVKPSSPSDL-ESLM 512 D L Y SHE+V+ +G AT+G++ A D LG++VFVELPE G V+ G VESVKA SD+ SP++G VIE N+ L + P L+N PY EEGWLIKV+ D E LM Sbjct: 7 DDLYYLDSHEYVRFDGETATIGLSAFAVDELGDIVFVELPEEGDKVEFEQSMGAVESVKAASDLYSPVTGTVIEKNSALEDQPELLNQDPYGEEGWLIKVRLDDVEDAKEGLM 119
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_MICAN (Glycine cleavage system H protein OS=Microcystis aeruginosa (strain NIES-843) GN=gcvH PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.739e-23 Identity = 47/104 (45.19%), Postives = 73/104 (70.19%), Query Frame = -1 Query: 201 DGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSP 512 + L+Y +HE+V+ EG +AT+GI+ A D LG++VF+ELPE G ++K G FG +ESVKA D+ P+SG V++ N + ++P L+ P+ EGWL+KV+ +P Sbjct: 7 EDLRYLETHEYVRLEGEIATLGISAFAVDQLGDIVFLELPELGEALKVGSSFGTIESVKAVEDLYPPVSGTVVDRNQAMIDSPELIADDPHGEGWLLKVRVENP 110
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_BEUC1 (Glycine cleavage system H protein OS=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) GN=gcvH PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.739e-23 Identity = 56/126 (44.44%), Postives = 78/126 (61.90%), Query Frame = -1 Query: 144 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 521 SV Y + HEWV +GSVATVGIT+ A + LG+VVFV+LP+ GA + G G +ES K+ SD+ +P++G VIEVN+ + P VNS PY GWL +V+ ++ + L+D AY E Sbjct: 2 SVPTDRSYTAEHEWVLVDGSVATVGITEFAAEALGDVVFVQLPDVGAQLTAGEACGEIESTKSVSDLFAPVTGSVIEVNSAIDAGPETVNSDPYGAGWLFRVEIATAGE---LLDAAAYAALTSGE 124
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_SYNS3 (Glycine cleavage system H protein OS=Synechococcus sp. (strain CC9311) GN=gcvH PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.577e-23 Identity = 48/117 (41.03%), Postives = 77/117 (65.81%), Query Frame = -1 Query: 162 DGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYT 512 D ++A SHE+V+ E + VG++ +A D LG++VFV+LPE G + +G FG VESVKA ++ +PI+G+VI+ N + P + + P+ EGWL+ ++PS + +E LMD Y+ Sbjct: 7 DQFRFADSHEYVRQEAELVRVGLSAYAVDQLGDIVFVDLPEVGDDLSRGTSFGTVESVKAVEEMYAPITGKVIQRNEAVLANPEELQNDPHGEGWLLVIRPSELAQIEELMDSATYS 123 The following BLAST results are available for this feature:
BLAST of CX287134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 461
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287134 ID=CX287134; Name=CX287134; organism=Citrus clementina; type=EST; length=635bpback to top |