CX287134
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_YEAST (Glycine cleavage system H protein, mitochondrial OS=Saccharomyces cerevisiae GN=GCV3 PE=1 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 4.672e-23 Identity = 52/120 (43.33%), Postives = 72/120 (60.00%), Query Frame = -1 Query: 159 LKYASSHEWVK-HEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPS---SPSDLESLMDPQAYTK 506 ++Y S HEW+ H+ A VGIT +A D LG+ +VELPE G + QG G +ESVK+ S++ P G V E+NT L E PG+VN P +GWL+K+K + +E LM + Y K Sbjct: 45 VRYTSQHEWIAVHQDKTAFVGITKYATDSLGDATYVELPEVGTEISQGESLGSIESVKSASEIYQPADGTVEEINTNLEENPGVVNEDPMGDGWLVKMKLGEGVNVEQVEGLMSLEQYEK 164
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_MYCLE (Glycine cleavage system H protein OS=Mycobacterium leprae GN=gcvH PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 4.672e-23 Identity = 58/125 (46.40%), Postives = 74/125 (59.20%), Query Frame = -1 Query: 165 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLES----LMDPQAY 524 S + L Y + HEW++ VG+TD AQ LG+VVFV+LPE GA + G FG VES K+ SD+ +P+SG V VNT L +P LVNS PY GWL+ V S LES L+D + Y Sbjct: 2 SDIPSDLHYTAEHEWIRRSREDTVRVGLTDFAQSTLGDVVFVQLPEVGAELAAGKSFGEVESTKSVSDLYAPVSGTVSAVNTDLEGSPQLVNSDPYGAGWLLDVHVSDVGALESAIATLLDAETY 126
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_MYCLB (Glycine cleavage system H protein OS=Mycobacterium leprae (strain Br4923) GN=gcvH PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 4.672e-23 Identity = 58/125 (46.40%), Postives = 74/125 (59.20%), Query Frame = -1 Query: 165 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLES----LMDPQAY 524 S + L Y + HEW++ VG+TD AQ LG+VVFV+LPE GA + G FG VES K+ SD+ +P+SG V VNT L +P LVNS PY GWL+ V S LES L+D + Y Sbjct: 2 SDIPSDLHYTAEHEWIRRSREDTVRVGLTDFAQSTLGDVVFVQLPEVGAELAAGKSFGEVESTKSVSDLYAPVSGTVSAVNTDLEGSPQLVNSDPYGAGWLLDVHVSDVGALESAIATLLDAETY 126
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_PELLD (Glycine cleavage system H protein OS=Pelodictyon luteolum (strain DSM 273) GN=gcvH PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 7.969e-23 Identity = 50/116 (43.10%), Postives = 78/116 (67.24%), Query Frame = -1 Query: 165 LKYASSHEWVK--HEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAY 506 L+Y HEW++ +G+ A VGITD AQ LG++VFVEL G ++K+ FG VE+VK +D+ +P++GE++EVN L ++ VN PY GW++K+K + P+ + +L+D AY Sbjct: 7 LRYTKDHEWIQLLDDGATALVGITDFAQSELGDIVFVELKPAGTALKEHEIFGTVEAVKTVADLFAPVAGEILEVNAGL-DSAETVNQDPYGSGWMVKMKLADPASVANLLDAAAY 121
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH1_SULSO (Probable glycine cleavage system H protein 1 OS=Sulfolobus solfataricus GN=gcvH1 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 7.969e-23 Identity = 55/120 (45.83%), Postives = 76/120 (63.33%), Query Frame = -1 Query: 165 VLDGLKYASSHEWVK-HEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPS-DLESLMDPQAY 518 VL Y + EWV +VA +GITD+AQ L ++V +ELP+ VK G GV+ESVKA +D+ SP+SG ++EVN KL E P ++N PY EGW+ K+K S S + E L+ P+ Y Sbjct: 11 VLTDRLYTETDEWVVLSNDNVAVIGITDYAQKKLRDIVGIELPQLQKEVKAGESVGVIESVKAAADIFSPLSGIIVEVNNKLLEHPEIINKDPYGEGWIFKLKASKLSEEKEKLLSPEKY 130
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH1_DICDI (Probable glycine cleavage system H protein 1, mitochondrial OS=Dictyostelium discoideum GN=gcvH1 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 7.969e-23 Identity = 52/120 (43.33%), Postives = 75/120 (62.50%), Query Frame = -1 Query: 147 KYASSHEWVKHEGSVA-TVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 503 +Y + HEWV GS +GITD AQ LG++VFVE+P+ GA++ QG VVESVKA SD+ P+ G + VN +L +P LVN P +GW+++ K S +SLM+ Y ++ +E Sbjct: 26 RYTNDHEWVTSLGSQNYRLGITDFAQKQLGDIVFVEIPQIGATLSQGQPITVVESVKAASDIYIPMDGSITTVNQELESSPELVNEEPMGDGWIVEYKSSKTDQFQSLMNKAQYDEYIKE 145
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_PROM9 (Glycine cleavage system H protein OS=Prochlorococcus marinus (strain MIT 9312) GN=gcvH PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.041e-22 Identity = 48/116 (41.38%), Postives = 74/116 (63.79%), Query Frame = -1 Query: 165 DGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAY 512 D L YA +HE+V E + +G+++ A D LG++VFVEL + GA++++G FG +ESVKA +V P SGE++ VN + + P L+ + P EGWL+ +KP S + LM + Y Sbjct: 7 DNLNYADTHEYVLEEEGLLKIGVSEFAIDQLGDIVFVELADQGATLEKGETFGTIESVKAVEEVYLPFSGEIVSVNESVIDNPELLQNDPIGEGWLVILKPESKVSIADLMTSEEY 122
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_MYCS2 (Glycine cleavage system H protein OS=Mycobacterium smegmatis GN=gcvH PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.041e-22 Identity = 56/124 (45.16%), Postives = 75/124 (60.48%), Query Frame = -1 Query: 165 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSS---PSDLESLMDPQAY 524 S + L Y S HEWV G VGITD+AQ LG+VVFV+LP+ GA V G FG VES K+ SD+ +P++ +V+ VN L +P LVNS PY EGWL+ ++ + L L+D + Y Sbjct: 2 SEIPADLYYTSEHEWVLRTGDDTVRVGITDYAQSALGDVVFVQLPDVGADVASGDAFGEVESTKSVSDLYAPVTAKVVAVNGDLEGSPELVNSDPYGEGWLVDLRVEAGTLDEALGGLLDAEGY 125
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_DESVM (Glycine cleavage system H protein OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=gcvH PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.041e-22 Identity = 55/119 (46.22%), Postives = 76/119 (63.87%), Query Frame = -1 Query: 168 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPS-SPSDLESLMDPQA 521 S+ L Y +HEWV+ EG A +GIT AQ+ LG++ FV+LP G ++ G G VESVKA S++ SP++G V VN L+ P LVN SPY +GW+++VK S +P L S D +A Sbjct: 2 SIPADLLYTDTHEWVRIEGDEAVIGITQFAQEQLGDLTFVDLPAVGDTLATGQEMGSVESVKAASELYSPLAGTVSAVNDALSGAPELVNQSPYTDGWMVRVKLSATPEGLLSAADYEA 120
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_THEVO (Probable glycine cleavage system H protein OS=Thermoplasma volcanium GN=gcvH PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.359e-22 Identity = 50/104 (48.08%), Postives = 71/104 (68.27%), Query Frame = -1 Query: 213 SSVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVK 524 ++V DGLKY +HEW K + +ATVGITD+AQ + ++V+V+LPE G K G +ESVK+ DV SP++GE+ EVN +LT+ P +N PY WL+K+K Sbjct: 2 TNVPDGLKYTKTHEWYKVDNGIATVGITDYAQSQMTDIVYVDLPEVGDKKKVGDVLLTIESVKSAEDVYSPLTGEITEVNQELTKHPENINKDPY-GNWLVKMK 104 The following BLAST results are available for this feature:
BLAST of CX287134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 461
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287134 ID=CX287134; Name=CX287134; organism=Citrus clementina; type=EST; length=635bpback to top |