CX287134
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_PROM5 (Glycine cleavage system H protein OS=Prochlorococcus marinus (strain MIT 9515) GN=gcvH PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.775e-22 Identity = 48/116 (41.38%), Postives = 75/116 (64.66%), Query Frame = -1 Query: 165 DGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAY 512 + LKYA +HE+VK E + +G+++ A D LG++VFVEL E G ++++G FG +ESVKA +V P +GEV+ VN + + P ++ + P GWL+ +KP S L+ LM+ Y Sbjct: 7 NNLKYADTHEYVKEENGLLKIGVSEFAIDQLGDIVFVELVEKGTNLQKGETFGTIESVKAVEEVYLPFAGEVLSVNESVIDNPEILQNDPIGNGWLLIIKPESNVLLDELMNSDEY 122
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_CHLPD (Glycine cleavage system H protein OS=Chlorobium phaeobacteroides (strain DSM 266) GN=gcvH PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.319e-22 Identity = 52/121 (42.98%), Postives = 76/121 (62.81%), Query Frame = -1 Query: 165 SVLDGLKYASSHEWVK--HEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAY 521 ++ + L+Y HEWVK +GS A GITD AQ LG++VFVEL G +K FG VE+VK +D+ +PI+GE++ +N L + +VN+ PY EGWL+K+K +E L+D +Y Sbjct: 2 NIPEDLRYTKDHEWVKLLDDGSTALAGITDFAQSELGDIVFVELKAPGTKLKAHEVFGTVEAVKTVADLFAPIAGELVGINEAL-DAAEVVNTDPYGEGWLVKIKVDDAKAVEELLDAASY 121
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_PROM2 (Glycine cleavage system H protein OS=Prochlorococcus marinus (strain MIT 9215) GN=gcvH PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.028e-22 Identity = 46/116 (39.66%), Postives = 74/116 (63.79%), Query Frame = -1 Query: 165 DGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAY 512 D L YA +HE+V E + +G+++ A D LG++VFVEL + G+++++G FG +ESVKA +V P SGE++ VN + + P L+ + P EGWL+ +KP + + LM + Y Sbjct: 7 DNLNYADTHEYVLEEKGLLKIGVSEFAIDQLGDIVFVELADQGSTLEKGETFGTIESVKAVEEVYLPFSGEIVSVNENVVDNPELLQNDPIGEGWLVILKPKTKVSISDLMTSEEY 122
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_MYCGI (Glycine cleavage system H protein OS=Mycobacterium gilvum (strain PYR-GCK) GN=gcvH PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.028e-22 Identity = 55/124 (44.35%), Postives = 75/124 (60.48%), Query Frame = -1 Query: 165 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPS---DLESLMDPQAY 524 S + L Y HEWV+ G VGITD+AQ LG+VVFV+LP+ A++ G FG VES K+ SD+ +P++ +V+ VN L P LVNS PY EGWL++++ S S L L D + Y Sbjct: 2 SEIPADLSYTEEHEWVQRTGDDTVRVGITDYAQAALGDVVFVQLPDVDAALTAGESFGEVESTKSVSDLYAPLTAKVVAVNGDLESNPQLVNSDPYGEGWLVELQADSASLDAALAELFDAEGY 125
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_CYAP8 (Glycine cleavage system H protein OS=Cyanothece sp. (strain PCC 8801) GN=gcvH PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.028e-22 Identity = 48/117 (41.03%), Postives = 78/117 (66.67%), Query Frame = -1 Query: 165 DGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSS-PSDLESLMDPQAY 512 D L+Y SHE+V+ +G +AT+G++ A + LG++V +ELPE G ++++G FG +ESVKA D+ P+SG VI+ N ++ E P + PY +GWLIKV+ S+ ++L+ + Y Sbjct: 7 DDLRYLDSHEYVRLDGEIATIGLSAFAIEQLGDIVHLELPEVGEALEKGESFGAIESVKAAEDLYPPVSGTVIDRNEEMIENPDQLADDPYGDGWLIKVRVSNLDAELDDTLSASEY 123
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH1_SULAC (Probable glycine cleavage system H protein 1 OS=Sulfolobus acidocaldarius GN=gcvH1 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.028e-22 Identity = 49/118 (41.53%), Postives = 73/118 (61.86%), Query Frame = -1 Query: 165 VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAY 518 +L Y + EW+ G++ATVGITD+AQ L ++V +ELP+ G V G VVESVKA +D+ SP+SG V+EVN +L +P +N PY GW+ K+K ++ L++ + Y Sbjct: 11 ILKDRHYTETDEWILINGNIATVGITDYAQKKLKDIVGIELPQVGREVTIGEQVAVVESVKAAADIFSPLSGSVLEVNKELQSSPETINKDPYGRGWIFKLKIKDEKEVSKLLNFEQY 128
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_THEFY (Glycine cleavage system H protein OS=Thermobifida fusca (strain YX) GN=gcvH PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.955e-22 Identity = 55/127 (43.31%), Postives = 76/127 (59.84%), Query Frame = -1 Query: 144 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVK-PSSPSDLESLMDPQAYTKFCEEE 521 SV L Y HEWV +ATVGIT A + LG++V+VE PE G++V G G +ES K+ S++ SP+ GEV++VN + P L+ S PY GWL KV+ P+D L+ P+ YT+ E E Sbjct: 2 SVPAELGYTKEHEWVAINEGIATVGITAFAAEALGDIVYVEPPEVGSTVTAGESCGEIESHKSVSELYSPVDGEVVDVNQAAVDDPELIGSDPYGRGWLFKVELAEEPAD---LLTPEQYTQLTEGE 125
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_THEEB (Glycine cleavage system H protein OS=Thermosynechococcus elongatus (strain BP-1) GN=gcvH PE=3 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 5.165e-22 Identity = 52/116 (44.83%), Postives = 77/116 (66.38%), Query Frame = -1 Query: 168 DGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSS-PSDLESLMDPQA 512 + L+Y SHE+++ EG AT+GI+ A D LG++VFVELP G +++ G FG +ESVKA D+ +P+ G VI VN + + P + + PY EGWL+KV+ S+ P+ L S D +A Sbjct: 7 EDLQYLDSHEYLRLEGDTATLGISAFAVDQLGDIVFVELPAVGDALEPGERFGTIESVKAVEDLYAPLGGTVIAVNQAVIDNPEQIAADPYGEGWLVKVQVSTLPTGLLSAADYRA 122
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_VESOH (Glycine cleavage system H protein OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=gcvH PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.746e-22 Identity = 59/123 (47.97%), Postives = 73/123 (59.35%), Query Frame = -1 Query: 159 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTK 524 S + D +Y +HEW+ G T+GITDHAQ LG++VFVELP V F VVESVKA S V SP ++IE N L + P LVNSS Y++GWL+K K S D LMD AY + Sbjct: 2 SEIRDDRQYTQTHEWILDNGDDTYTMGITDHAQALLGDMVFVELPNVDDEVSIDDEFCVVESVKAASGVYSPADLQIIEANEALDDEPELVNSSCYDDGWLVKFKSHSVVD---LMDSTAYAQ 121
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_PROA2 (Glycine cleavage system H protein OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=gcvH PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.746e-22 Identity = 51/122 (41.80%), Postives = 74/122 (60.66%), Query Frame = -1 Query: 147 LKYASSHEWVK--HEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 506 L Y HEW+K +G+ A VGITD AQ LG++VFVE G + + FG VE+VK +D+ +P+ G ++EVN L + +VNSSPYE+GW++KV S ++LM Y++ E Sbjct: 7 LLYTKDHEWIKVLDDGTTALVGITDFAQSELGDIVFVETKPVGTELSEHDVFGTVEAVKTVADLFAPVDGVIVEVNEAL-DAAEVVNSSPYEDGWMVKVSLKDASQFDALMSAAEYSEMVGE 127 The following BLAST results are available for this feature:
BLAST of CX287134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 461
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287134 ID=CX287134; Name=CX287134; organism=Citrus clementina; type=EST; length=635bpback to top |