CX287134
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH2_DICDI (Glycine cleavage system H-like protein gcvH2 OS=Dictyostelium discoideum GN=gcvH2 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.465e-18 Identity = 48/120 (40.00%), Postives = 73/120 (60.83%), Query Frame = -1 Query: 150 YASSHEWVK--HEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATS-DVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCE 500 Y++ EWVK + VATVG++ LG++ +VELP+ ++ FGV+ES AT+ + +P+SGEV+EVN KL ++P L+N P W++K K S P + + LMD Y KF + Sbjct: 29 YSAELEWVKLSDDNKVATVGLSSFGAQRLGKINYVELPKEHRKCRREEKFGVLESSNATAFGLYAPVSGEVLEVNEKLKKSPSLLNEDP-ANNWMVKFKVSKPDEFKKLMDSNKYKKFVQ 147
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_KORCO (Probable glycine cleavage system H protein OS=Korarchaeum cryptofilum (strain OPF8) GN=gcvH PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.910e-18 Identity = 50/130 (38.46%), Postives = 75/130 (57.69%), Query Frame = -1 Query: 147 YASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKL-------TETP-GL--VNSSPYEEGWLI--KVKPSSPSDLESLMDPQAYTKFCEE 500 Y +HEWVK + A +GIT +A + LG++ F+E+ G +K+G GVVES K T + +P+SGE++E+N +E P GL + PYEEGW++ +VK S+L LM + Y K +E Sbjct: 9 YTKTHEWVKISENRAIIGITSYAIEQLGDITFLEVKPKGTLIKKGEVLGVVESSKTTEKIYAPVSGEIVEINRDCGVVEEGSSEVPIGLEKIVEDPYEEGWIVVLEVKGDLSSELRDLMSSEDYLKHLKE 138
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_NOCFA (Glycine cleavage system H protein OS=Nocardia farcinica GN=gcvH PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.008e-17 Identity = 44/121 (36.36%), Postives = 70/121 (57.85%), Query Frame = -1 Query: 165 DGLKYASSHEWVKHEGSVAT-VGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLE----SLMDPQAY 512 + L+Y HEWV+ G VGITD+AQ LG+VV+V+LP+ G VES K+ SD+ +P++ +V+ VN +L+ P +N+ PY GWL +++ + + L+ L+D Y Sbjct: 6 EDLRYTEEHEWVRRIGPTRVRVGITDYAQSQLGDVVYVQLPDEQREAAAGESIAEVESTKSVSDIYAPLAAKVVAVNEELSNAPETLNADPYGAGWLFELEVADAAALDVTLGELLDAAGY 126
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_CORA7 (Glycine cleavage system H protein OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=gcvH PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.003e-17 Identity = 44/108 (40.74%), Postives = 63/108 (58.33%), Query Frame = -1 Query: 192 YASSHEWVKHE-----GSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDL 500 Y+ HEW+ GS +GIT A D LGEVVF ELP G +V+ G G VES K+ SD+ SP++G V VN + + ++N+ P+ EGWL +V+ + +L Sbjct: 10 YSEDHEWINATADSVVGSTVRIGITSVATDRLGEVVFAELPAVGDTVEHGETCGEVESTKSVSDLYSPVTGTVTAVNEGVHDDYAVINNDPFGEGWLFEVEVTEAGEL 117
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_TROWT (Glycine cleavage system H protein OS=Tropheryma whipplei (strain Twist) GN=gcvH PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.534e-17 Identity = 46/120 (38.33%), Postives = 71/120 (59.17%), Query Frame = -1 Query: 147 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 506 L Y+ HEWV + +A VGIT +A LG++V+++LP A + QG G +ES K+ S++ SP+SG VI VN + +PGL+NS WL K + ++ LMD Y+++ +E Sbjct: 7 LVYSKEHEWVFIDDDIAWVGITKYAVKKLGDIVYIDLPSQDALIVQGECVGEIESTKSVSEIYSPVSGRVIAVNEDVISSPGLLNSD--SSVWLFK---AECENIPELMDWGQYSEYTKE 121
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_TROW8 (Glycine cleavage system H protein OS=Tropheryma whipplei (strain TW08/27) GN=gcvH PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.534e-17 Identity = 46/120 (38.33%), Postives = 71/120 (59.17%), Query Frame = -1 Query: 147 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 506 L Y+ HEWV + +A VGIT +A LG++V+++LP A + QG G +ES K+ S++ SP+SG VI VN + +PGL+NS WL K + ++ LMD Y+++ +E Sbjct: 7 LVYSKEHEWVFIDDDIAWVGITKYAVKKLGDIVYIDLPSQDALIVQGECVGEIESTKSVSEIYSPVSGRVIAVNEDVISSPGLLNSD--SSVWLFK---AECENIPELMDWGQYSEYTKE 121
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH3_DICDI (Putative glycine cleavage system H protein 3 OS=Dictyostelium discoideum GN=gcvH3 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.534e-17 Identity = 39/126 (30.95%), Postives = 73/126 (57.94%), Query Frame = -1 Query: 132 KYASSHEWVK--HEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEENAAH 503 +Y+ SHEW+K H T+GIT +A D L +V + LP+ +++ + FG +ES K +D+ S + G+ + +N+ + P +V+ SP ++GWLIK++ + +M Y +F ++ N ++ Sbjct: 23 RYSESHEWIKFNHRNKTCTLGITKYASDQLKSIVNINLPDLNSTITRKQPFGNIESTKTVADLFSDVDGKAVLLNSDVIVDPTIVSHSPEDKGWLIKMESNDFESFNKMMTKSEYGQFLKDINKSN 148
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_METFK (Glycine cleavage system H protein OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=gcvH PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.901e-16 Identity = 46/120 (38.33%), Postives = 71/120 (59.17%), Query Frame = -1 Query: 168 SVLDGLKYASSHEWVK-HEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPS-SPSDLESLMDPQA 521 ++ + L+Y + H WV+ E GITDHAQD LG++V+VE P+ G + G G+VESVK SD+++P+ G V +N L TP +N PY + W+ +P +P+ L S + +A Sbjct: 2 NIPENLQYTAEHLWVRPDENGHWLAGITDHAQDLLGDIVYVEAPKPGTRLSAGQPCGLVESVKTGSDLHAPLDGTVTAINEALQITPEEINDRPY-DAWIFSFEPEHAPTGLLSAAEYRA 120
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH2_SULTO (Probable glycine cleavage system H protein 2 OS=Sulfolobus tokodaii GN=gcvH2 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.532e-16 Identity = 45/106 (42.45%), Postives = 63/106 (59.43%), Query Frame = -1 Query: 168 WVKHEG-SVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQA 482 W K E V VGITD AQ G+VV V L + G V++G +ES K V +P SGE+I+VN + + P LVN PY +GWL+K+K ++P +L+ L+ A Sbjct: 24 WAKQEAPDVIVVGITDIAQTMAGKVVKVRLKKKGTKVERGKPVATMESGKWAGPVPAPASGEIIDVNPDVEKNPVLVNQDPYGKGWLVKMKVNNPEELKQLVTGSA 129
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH2_SULSO (Probable glycine cleavage system H protein 2 OS=Sulfolobus solfataricus GN=gcvH2 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.532e-16 Identity = 42/106 (39.62%), Postives = 64/106 (60.38%), Query Frame = -1 Query: 168 WVKHEG-SVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQA 482 W K E VGITD AQ G++V V + + G V++G +ES K V +P++GEV+EVN + ++P ++N PY +GWL+K+K S+P +L+ L QA Sbjct: 24 WAKLESPDTIVVGITDLAQTMAGKIVKVRIKKKGTKVEKGRPVATMESGKWAGPVPAPVTGEVVEVNAEAEKSPIIINQDPYGKGWLVKMKMSNPEELKQLFSGQA 129 The following BLAST results are available for this feature:
BLAST of CX287134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 461
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287134 ID=CX287134; Name=CX287134; organism=Citrus clementina; type=EST; length=635bpback to top |