CX287164

Overview
NameCX287164
Unique NameCX287164
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length593
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287164 vs. ExPASy Swiss-Prot
Match: MAOM_ASCSU (NAD-dependent malic enzyme, mitochondrial (Fragment) OS=Ascaris suum PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.490e-41
Identity = 87/191 (45.55%), Postives = 126/191 (65.97%), Query Frame = 2
Query:   20 EETRKKICLVDSKGLIVSSRKD-SLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIA 589
            EE   +I L+D  GL+  +RK+ + +H +  +A +     ++L+ ++  +P  LIG+S V   F +EVI AMA  NE+P+I ALSNPTS++ECTAEEAYT++ G A++ASGSPF  FE NG  + PGQ NNAYIFPG  LG ++     V +D+ L A++ +A  VTE++ + G +YP    IR+IS  IA
Sbjct:  389 EEACNRIYLMDIDGLVTKNRKEMNPRHVQ--FAKDMPETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIFALSNPTSKAECTAEEAYTFTNGAALYASGSPFPNFELNGHTYKPGQGNNAYIFPGVALGTILFQIRHVDNDLFLLAAKKVASCVTEDSLKVGRVYPQLKEIREISIQIA 577          
BLAST of CX287164 vs. ExPASy Swiss-Prot
Match: MAO1_ENTS8 (NAD-dependent malic enzyme OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=sfcA PE=3 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 2.083e-35
Identity = 82/203 (40.39%), Postives = 120/203 (59.11%), Query Frame = 2
Query:   20 EETRKKICLVDSKGLIVSS-------------RKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIA 589
            E+ R ++ +VD  GL+  +             ++DSL    K W  + + ++ LLD V+  KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T  +   W+ G A+ A+GSPF P     K +   Q NNAYIFPG GLG++ SGA+RV D+M++AASEALA      N   GL+ PP ++I+++S +IA
Sbjct:  327 EQARARVFMVDRFGLLTDNMPNLLSFQSKLVQKRDSL----KGWDTQSDSIS-LLDVVRNAKPDILIGVSGQTGLFTEEIIREMHKHCARPIVMPLSNPTSRVEATPHDILNWTDGAALVATGSPFQPVTVKEKTYPIAQCNNAYIFPGIGLGIISSGALRVTDEMMMAASEALASHSPLVNTGSGLVLPPLTDIQQVSKDIA 524          
BLAST of CX287164 vs. ExPASy Swiss-Prot
Match: MAO1_SALAR (NAD-dependent malic enzyme OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=sfcA PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.721e-35
Identity = 83/203 (40.89%), Postives = 121/203 (59.61%), Query Frame = 2
Query:   20 EETRKKICLVDSKGLIVS-------------SRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIA 589
            +  R+K+ +VD  GL+                + D+LQH    W  E++ V +LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF P  +  KV+   Q NNAYIFPG GLG++ SGA R+ D+ML++ASE LAK     N  +GL+ P   +I+ +S  IA
Sbjct:  326 DAARQKVFMVDRFGLLTDRMPNLLSFQTKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIA 523          
BLAST of CX287164 vs. ExPASy Swiss-Prot
Match: MAO1_CITK8 (NAD-dependent malic enzyme OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=sfcA PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 7.917e-35
Identity = 82/203 (40.39%), Postives = 120/203 (59.11%), Query Frame = 2
Query:   20 EETRKKICLVDSKGLIVSS-------------RKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIA 589
            E  R+K+ +VD  GL+                ++++LQH    W  E E V +LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF P  +  K++   Q NNAYIFPG GLG++ SGA R+ D+ML++ASE LAK        +GL+ P   +I+ +S  IA
Sbjct:  326 EAARQKVFMVDRFGLLTDQMPNLLSFQTKLVQKRENLQH----WDSESE-VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFAPVAWKDKIYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKYSPLVLNGEGLVLPELKDIQTVSRAIA 523          
BLAST of CX287164 vs. ExPASy Swiss-Prot
Match: MAO1_SALTY (NAD-dependent malic enzyme OS=Salmonella typhimurium GN=sfcA PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.034e-34
Identity = 82/203 (40.39%), Postives = 120/203 (59.11%), Query Frame = 2
Query:   20 EETRKKICLVDSKGLIVS-------------SRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIA 589
            +  R+ + +VD  GL+                + D+LQH    W  E++ V +LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF P  +  KV+   Q NNAYIFPG GLG++ SGA R+ D+ML++ASE LAK     N  +GL+ P   +I+ +S  IA
Sbjct:  326 DAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIA 523          
BLAST of CX287164 vs. ExPASy Swiss-Prot
Match: MAO1_SALTI (NAD-dependent malic enzyme OS=Salmonella typhi GN=sfcA PE=3 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.034e-34
Identity = 82/203 (40.39%), Postives = 120/203 (59.11%), Query Frame = 2
Query:   20 EETRKKICLVDSKGLIVS-------------SRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIA 589
            +  R+ + +VD  GL+                + D+LQH    W  E++ V +LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF P  +  KV+   Q NNAYIFPG GLG++ SGA R+ D+ML++ASE LAK     N  +GL+ P   +I+ +S  IA
Sbjct:  326 DAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIA 523          
BLAST of CX287164 vs. ExPASy Swiss-Prot
Match: MAO1_SALSV (NAD-dependent malic enzyme OS=Salmonella schwarzengrund (strain CVM19633) GN=sfcA PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.034e-34
Identity = 82/203 (40.39%), Postives = 120/203 (59.11%), Query Frame = 2
Query:   20 EETRKKICLVDSKGLIVS-------------SRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIA 589
            +  R+ + +VD  GL+                + D+LQH    W  E++ V +LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF P  +  KV+   Q NNAYIFPG GLG++ SGA R+ D+ML++ASE LAK     N  +GL+ P   +I+ +S  IA
Sbjct:  326 DAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIA 523          
BLAST of CX287164 vs. ExPASy Swiss-Prot
Match: MAO1_SALPB (NAD-dependent malic enzyme OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=sfcA PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.034e-34
Identity = 82/203 (40.39%), Postives = 120/203 (59.11%), Query Frame = 2
Query:   20 EETRKKICLVDSKGLIVS-------------SRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIA 589
            +  R+ + +VD  GL+                + D+LQH    W  E++ V +LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF P  +  KV+   Q NNAYIFPG GLG++ SGA R+ D+ML++ASE LAK     N  +GL+ P   +I+ +S  IA
Sbjct:  326 DAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIA 523          
BLAST of CX287164 vs. ExPASy Swiss-Prot
Match: MAO1_SALPA (NAD-dependent malic enzyme OS=Salmonella paratyphi A GN=sfcA PE=3 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.034e-34
Identity = 82/203 (40.39%), Postives = 120/203 (59.11%), Query Frame = 2
Query:   20 EETRKKICLVDSKGLIVS-------------SRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIA 589
            +  R+ + +VD  GL+                + D+LQH    W  E++ V +LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF P  +  KV+   Q NNAYIFPG GLG++ SGA R+ D+ML++ASE LAK     N  +GL+ P   +I+ +S  IA
Sbjct:  326 DAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIA 523          
BLAST of CX287164 vs. ExPASy Swiss-Prot
Match: MAO1_SALHS (NAD-dependent malic enzyme OS=Salmonella heidelberg (strain SL476) GN=sfcA PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.034e-34
Identity = 82/203 (40.39%), Postives = 120/203 (59.11%), Query Frame = 2
Query:   20 EETRKKICLVDSKGLIVS-------------SRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIA 589
            +  R+ + +VD  GL+                + D+LQH    W  E++ V +LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF P  +  KV+   Q NNAYIFPG GLG++ SGA R+ D+ML++ASE LAK     N  +GL+ P   +I+ +S  IA
Sbjct:  326 DAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIA 523          
The following BLAST results are available for this feature:
BLAST of CX287164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAOM_ASCSU1.490e-4145.55NAD-dependent malic enzyme, mitochondrial (Fragmen... [more]
MAO1_ENTS82.083e-3540.39NAD-dependent malic enzyme OS=Enterobacter sakazak... [more]
MAO1_SALAR2.721e-3540.89NAD-dependent malic enzyme OS=Salmonella arizonae ... [more]
MAO1_CITK87.917e-3540.39NAD-dependent malic enzyme OS=Citrobacter koseri (... [more]
MAO1_SALTY1.034e-3440.39NAD-dependent malic enzyme OS=Salmonella typhimuri... [more]
MAO1_SALTI1.034e-3440.39NAD-dependent malic enzyme OS=Salmonella typhi GN=... [more]
MAO1_SALSV1.034e-3440.39NAD-dependent malic enzyme OS=Salmonella schwarzen... [more]
MAO1_SALPB1.034e-3440.39NAD-dependent malic enzyme OS=Salmonella paratyphi... [more]
MAO1_SALPA1.034e-3440.39NAD-dependent malic enzyme OS=Salmonella paratyphi... [more]
MAO1_SALHS1.034e-3440.39NAD-dependent malic enzyme OS=Salmonella heidelber... [more]

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Properties
Property NameValue
Genbank descriptionC01005D06SK Veg1 Citrus clementina cDNA clone C01005D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287164 ID=CX287164; Name=CX287164; organism=Citrus clementina; type=EST; length=593bp
GCAGACTAAAGCTCCTGTGGAAGAGACCCGGAAGAAGATATGTCTTGTAG
ACTCAAAGGGACTGATAGTCAGCTCCCGGAAAGATTCACTTCAACACTTC
AAGAAGCCTTGGGCTCATGAACATGAGCCTGTCAACAATCTCTTAGATGC
TGTCAAGGTAATCAAGCCAACAATTTTGATTGGATCATCTGGAGTTGGAA
GAACTTTTACAAAAGAAGTAATCGAGGCCATGGCCTCCTTCAATGAGAAA
CCTCTCATCCTGGCTCTCTCCAACCCAACCTCACAGTCAGAATGTACAGC
TGAAGAAGCTTACACTTGGAGTAAGGGTCGTGCAATTTTCGCTAGTGGAA
GTCCATTTGATCCTTTTGAATACAATGGAAAAGTTTTTGTTCCTGGCCAG
GCCAACAATGCTTACATCTTCCCTGGATTTGGTTTGGGTTTGGTCATCTC
TGGAGCAATTCGGGTACATGACGACATGCTTCTGGCAGCCTCGGAAGCCT
TGGCAAAACAAGTGACAGAAGAGAACTTTGAGAAGGGATTGATCTACCCA
CCATTTTCTAATATTAGAAAAATTTCAGCCAATATAGCTGCTA
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