CX287175

Overview
NameCX287175
Unique NameCX287175
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length661
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287175 vs. ExPASy Swiss-Prot
Match: PROF_PRUAV (Profilin OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.389e-57
Identity = 101/129 (78.29%), Postives = 116/129 (89.92%), Query Frame = 2
Query:  137 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 523
            WQAYVDDHL+C+I+GN L+AAAI+G DGSVW+QS  FP  KPEEI  I+ D ++PGTLAPTGL+LGGTKYMVIQGE GAVIRGKKG GG+T+KKT+ ALIIGIYDEP+TPGQCNMIVERLGDYLI+QGL
Sbjct:    3 WQAYVDDHLMCDIDGNRLTAAAILGQDGSVWSQSATFPAFKPEEIAAILKDLDQPGTLAPTGLFLGGTKYMVIQGEAGAVIRGKKGSGGITVKKTNQALIIGIYDEPLTPGQCNMIVERLGDYLIEQGL 131          
BLAST of CX287175 vs. ExPASy Swiss-Prot
Match: PROF1_OLEEU (Profilin-1 OS=Olea europaea GN=PRO1 PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.389e-57
Identity = 102/132 (77.27%), Postives = 117/132 (88.64%), Query Frame = 2
Query:  137 WQAYVDDHLLCEIEGNH---LSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 523
            WQAYVDDHL+C+IEG+    L+AAAI+GHDGSVWAQS  FPQ KPEE+ GIM DFNEPG LAPTGL+LGGTKYMVIQGE GAVIRGKKG GG+TIKKT  AL+ GIY+EP+TPGQCNM+VERLGDYL++QG+
Sbjct:    3 WQAYVDDHLMCDIEGHEDHRLTAAAIVGHDGSVWAQSATFPQFKPEEMNGIMTDFNEPGHLAPTGLHLGGTKYMVIQGEAGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMVVERLGDYLVEQGM 134          
BLAST of CX287175 vs. ExPASy Swiss-Prot
Match: PROF2_PARJU (Profilin-2 OS=Parietaria judaica GN=PRO2 PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.075e-57
Identity = 103/130 (79.23%), Postives = 119/130 (91.54%), Query Frame = 2
Query:  137 WQAYVDDHLLCEI-EGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 523
            WQAYVDDHL+C++ +GN L++AAIIGHDGSVWAQS NFPQLKPEE+TGIMNDFNE G LAPTGL+LGGTKYMVIQGE GAVI GKKG GG T+KKT  A++IGIYDEPMTPGQCN++VERLGDYL++QG+
Sbjct:    3 WQAYVDDHLMCDVGDGNTLASAAIIGHDGSVWAQSANFPQLKPEEVTGIMNDFNEGGFLAPTGLFLGGTKYMVIQGESGAVI-GKKGSGGATLKKTGQAIVIGIYDEPMTPGQCNLVVERLGDYLLEQGM 131          
BLAST of CX287175 vs. ExPASy Swiss-Prot
Match: PROF3_OLEEU (Profilin-3 OS=Olea europaea GN=PRO3 PE=1 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 5.323e-57
Identity = 102/132 (77.27%), Postives = 116/132 (87.88%), Query Frame = 2
Query:  137 WQAYVDDHLLCEIEGNH---LSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 523
            WQAYVDDHL+C+IEG+    L+AAAI+GHDGSVWAQS  FPQ KPEE+ GIM DFNEPG LAPTGL+LGGTKYMVIQGE GAVIRGKKG GG+TIKKT  AL+ GIY+EP+TPGQCNM+ ERLGDYL++QGL
Sbjct:    3 WQAYVDDHLMCDIEGHEGHRLTAAAIVGHDGSVWAQSATFPQFKPEEMNGIMTDFNEPGHLAPTGLHLGGTKYMVIQGEAGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMVAERLGDYLLEQGL 134          
BLAST of CX287175 vs. ExPASy Swiss-Prot
Match: PROF2_MAIZE (Profilin-2 OS=Zea mays GN=PRO2 PE=2 SV=2)

HSP 1 Score: 220.705 bits (561), Expect = 5.323e-57
Identity = 97/129 (75.19%), Postives = 116/129 (89.92%), Query Frame = 2
Query:  137 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 523
            WQAYVD+HL+CEIEG+HL+AAAI+GHDG+ WAQS  FP+ K E++  IM DF+EPG LAPTGL+LG TKYMVIQGEPGAVIRGKKG GG+T+KKT  AL++GIYDEPMTPGQCNM+VERLGDYL++QG+
Sbjct:    3 WQAYVDEHLMCEIEGHHLAAAAIVGHDGAAWAQSTAFPEFKTEDMANIMKDFDEPGHLAPTGLFLGPTKYMVIQGEPGAVIRGKKGSGGITVKKTGQALVVGIYDEPMTPGQCNMVVERLGDYLLEQGM 131          
BLAST of CX287175 vs. ExPASy Swiss-Prot
Match: PROF5_ARATH (Profilin-5 OS=Arabidopsis thaliana GN=PRO5 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 6.952e-57
Identity = 100/129 (77.52%), Postives = 113/129 (87.60%), Query Frame = 2
Query:  137 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 523
            WQ YVDDHL+C++ GN L+AAAI+G DGSVWAQS NFPQ+KPEEI GI +DF  PGTLAPTGL+LGG KYMVIQGEP AVIRGKKG GGVTIKKT+ AL+ GIYDEPMTPGQCNM+VE LG+YLI+ GL
Sbjct:    3 WQTYVDDHLMCDVAGNRLTAAAILGQDGSVWAQSNNFPQVKPEEIQGIKDDFTTPGTLAPTGLFLGGNKYMVIQGEPNAVIRGKKGAGGVTIKKTTLALVFGIYDEPMTPGQCNMVVENLGEYLIESGL 131          
BLAST of CX287175 vs. ExPASy Swiss-Prot
Match: PROF1_SOLLC (Profilin-1 OS=Solanum lycopersicum GN=PRO1 PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 9.079e-57
Identity = 100/130 (76.92%), Postives = 117/130 (90.00%), Query Frame = 2
Query:  137 WQAYVDDHLLCEIEG--NHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 520
            WQ YVDDHL+C+IEG  +HLS+AAI+G DGSVWAQS NFP+ K EEIT IM DF+EPG LAPTGL+L GTKYMVIQGEPGAVIRGKKGPGG+TIKKT+ ALI G+Y+EP+TPGQCNM+VE++GDYL+DQG
Sbjct:    3 WQTYVDDHLMCDIEGTGHHLSSAAILGFDGSVWAQSPNFPKFKAEEITNIMKDFDEPGHLAPTGLFLAGTKYMVIQGEPGAVIRGKKGPGGITIKKTAQALIFGVYEEPVTPGQCNMVVEKIGDYLVDQG 132          
BLAST of CX287175 vs. ExPASy Swiss-Prot
Match: PROF1_ARATH (Profilin-1 OS=Arabidopsis thaliana GN=PRO1 PE=1 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.023e-56
Identity = 100/129 (77.52%), Postives = 113/129 (87.60%), Query Frame = 2
Query:  137 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 523
            WQ+YVDDHL+C++EGNHL+AAAI+G DGSVWAQS  FPQLKP+EI GI  DF EPG LAPTGL+LGG KYMVIQGE GAVIRGKKGPGGVTIKKT+ AL+ G YDEPMT GQCN++VERLGDYLI+  L
Sbjct:    3 WQSYVDDHLMCDVEGNHLTAAAILGQDGSVWAQSAKFPQLKPQEIDGIKKDFEEPGFLAPTGLFLGGEKYMVIQGEQGAVIRGKKGPGGVTIKKTNQALVFGFYDEPMTGGQCNLVVERLGDYLIESEL 131          
BLAST of CX287175 vs. ExPASy Swiss-Prot
Match: PROF_CROSA (Profilin OS=Crocus sativus PE=1 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 2.642e-56
Identity = 96/128 (75.00%), Postives = 116/128 (90.62%), Query Frame = 2
Query:  137 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 520
            WQ YVD+HL+C+++G+ L++AAI+GHDGSVWAQS  FP+LKP EIT I+NDFNEPG+LAPTG+Y+ G KYMVIQGEPG VIRGKKG GGVTIKK++ ALI G+YDEPMTPGQCN++VERLGDYLI+QG
Sbjct:    3 WQTYVDEHLMCDMDGHVLTSAAILGHDGSVWAQSAGFPELKPAEITAILNDFNEPGSLAPTGMYINGAKYMVIQGEPGVVIRGKKGSGGVTIKKSNMALIFGLYDEPMTPGQCNLVVERLGDYLIEQG 130          
BLAST of CX287175 vs. ExPASy Swiss-Prot
Match: PROF2_TOBAC (Profilin-2 OS=Nicotiana tabacum GN=PRO2 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 5.885e-56
Identity = 100/131 (76.34%), Postives = 116/131 (88.55%), Query Frame = 2
Query:  137 WQAYVDDHLLCEIEG---NHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 520
            WQ YVDDHL+ +IEG   NHL+AAAI+G+DGSVWAQS  FP+ KPEEIT IM DF+EPG LAPTGL+LGG KYMVIQGEPGAVIRGKKG GG+TIKKT+ ALI GIY+EP+TPGQCNM+VE++GDYL+DQG
Sbjct:    3 WQTYVDDHLMADIEGQQGNHLAAAAILGNDGSVWAQSTTFPKFKPEEITNIMKDFDEPGHLAPTGLFLGGAKYMVIQGEPGAVIRGKKGSGGITIKKTNQALIFGIYEEPVTPGQCNMVVEKIGDYLVDQG 133          
The following BLAST results are available for this feature:
BLAST of CX287175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
PROF_PRUAV2.389e-5778.29Profilin OS=Prunus avium PE=1 SV=1[more]
PROF1_OLEEU2.389e-5777.27Profilin-1 OS=Olea europaea GN=PRO1 PE=1 SV=1[more]
PROF2_PARJU4.075e-5779.23Profilin-2 OS=Parietaria judaica GN=PRO2 PE=1 SV=1[more]
PROF3_OLEEU5.323e-5777.27Profilin-3 OS=Olea europaea GN=PRO3 PE=1 SV=1[more]
PROF2_MAIZE5.323e-5775.19Profilin-2 OS=Zea mays GN=PRO2 PE=2 SV=2[more]
PROF5_ARATH6.952e-5777.52Profilin-5 OS=Arabidopsis thaliana GN=PRO5 PE=2 SV... [more]
PROF1_SOLLC9.079e-5776.92Profilin-1 OS=Solanum lycopersicum GN=PRO1 PE=2 SV... [more]
PROF1_ARATH2.023e-5677.52Profilin-1 OS=Arabidopsis thaliana GN=PRO1 PE=1 SV... [more]
PROF_CROSA2.642e-5675.00Profilin OS=Crocus sativus PE=1 SV=1[more]
PROF2_TOBAC5.885e-5676.34Profilin-2 OS=Nicotiana tabacum GN=PRO2 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC01005E07SK Veg1 Citrus clementina cDNA clone C01005E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287175 ID=CX287175; Name=CX287175; organism=Citrus clementina; type=EST; length=661bp
TTTGTCTAGCTCTTCACAAAATCTCTTCTCGACAAAAATTAAGTCTTAAA
CACACTCATTTGTAAAAAGGCTTCAGGAAAAAAAAAAAAAATTCACAGAG
AAATCAGAGGAATCATCAAAGCAGAAAAAGATGTCGTGGCAAGCTTACGT
CGATGATCATCTGTTGTGTGAAATTGAGGGTAACCATCTCTCAGCTGCCG
CTATCATCGGCCACGACGGCAGCGTTTGGGCCCAGAGTGAAAACTTCCCT
CAGTTAAAACCTGAGGAAATAACTGGTATCATGAATGACTTTAATGAACC
TGGAACACTAGCACCAACTGGACTGTATCTTGGTGGCACAAAATATATGG
TGATCCAGGGTGAGCCAGGTGCTGTCATCCGAGGGAAGAAGGGCCCTGGT
GGTGTTACCATCAAGAAGACCAGTGCAGCCTTAATCATTGGAATCTATGA
TGAGCCGATGACCCCTGGGCAGTGCAACATGATTGTTGAAAGGCTTGGTG
ATTATCTCATTGATCAGGGTCTTTAGGTGGTTTGCATGTCCGCTAATTTG
TTTCATTTCTTGGCTTCCCTAAAAAGCTCGCACTGTTGAACTTCGGTGTA
ATAATATTACAGTATTCAAAGTTATGGGAACTGTGTGTGGAAAGGAAAGG
TTTGGTGCATG
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