CX287176
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287176 vs. ExPASy Swiss-Prot
Match: PME68_ARATH (Probable pectinesterase 68 OS=Arabidopsis thaliana GN=PME68 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.235e-18 Identity = 49/172 (28.49%), Postives = 81/172 (47.09%), Query Frame = 3 Query: 3 TLYAHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRPLKIYSTTVFLESYIDDFIEPAGWTEWSGDQGLD-TLYYGEFNNYGPGSGTDNRVTWPGYHVMDENDAYAFTVSQLIDGQEWL 515 TL + R +++EC + G+ID+IFGN + + C + S + +F I A + P E TG + C + T L Y+GR + YS V+ +Y D + GW +W T ++G +N YGPG+ V+W +D A+ F ++G+ W+ Sbjct: 200 TLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHS---IASRFGSIAAHGRTCPEEKTGFAFVGCRVTGTGPL---------YVGRAMGQYSRIVYAYTYFDALVAHGGWDDWDHKSNKSKTAFFGVYNCYGPGAAATRGVSWA--RALDYESAHPFIAKSFVNGRHWI 357
BLAST of CX287176 vs. ExPASy Swiss-Prot
Match: PME67_ARATH (Probable pectinesterase 67 OS=Arabidopsis thaliana GN=PME67 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.393e-17 Identity = 51/172 (29.65%), Postives = 78/172 (45.35%), Query Frame = 3 Query: 3 TLYAHSFRQFYRECDVYGTIDYIFGNAAVVLQACNI-VSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRPLKIYSTTVFLESYIDDFIEPAGWTEWSGDQGLDTLYYGEFNNYGPGSGTDNRVTWPGYHVMDENDAYAFTVSQLIDGQEWL 515 TL+ + R +Y EC + G+ID+IFG A + C I V + ITA ++ E TG + +++Y LGR YS +F ++Y+ + P GWT WS LY+GE+ +GPG+ R W + + + +F IDG WL Sbjct: 176 TLFDNKGRHYYHECYIQGSIDFIFGRATSIFNNCEIFVISDKRVKPYGSITAHHRESAEEKTGYVFIRGKVYGIDEVY---------LGRAKGPYSRVIFAKTYLSKTVVPDGWTNWSYHGSTQNLYHGEYKCHGPGAERQKRSDWA--KDLTKQEVESFLSIDFIDGTSWL 336
BLAST of CX287176 vs. ExPASy Swiss-Prot
Match: PME31_ARATH (Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.899e-16 Identity = 53/174 (30.46%), Postives = 83/174 (47.70%), Query Frame = 3 Query: 3 TLYAHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRPLKIYSTTVFLESYIDDFIEPAGWTEWSGDQGLDTLYYGEFNNYGPGSGTDNRVTWPGYHVMDENDAYAFTVSQLIDGQE---WL 515 TLY H +Q+ ++C + G++D+IFGN+ +L+ C+I + ITAQ + E+TG C I N S YLGRP + V +Y+D I GW W + + + E+ +GPGS + RV W +MD+ +A F +D ++ WL Sbjct: 145 TLYLHHGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSQ-----GFITAQSRKSSQESTGYVFLRCVITG------NGQSGYMYLGRPWGPFGRVVLAYTYMDACIRNVGWHNWGNAENERSACFYEYRCFGPGSCSSERVPW-SRELMDD-EAGHFVHHSFVDPEQDRPWL 305
BLAST of CX287176 vs. ExPASy Swiss-Prot
Match: PME55_ARATH (Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.576e-14 Identity = 44/147 (29.93%), Postives = 67/147 (45.58%), Query Frame = 3 Query: 3 TLYAHSFRQFYRECDVYGTIDYIFGNAAVVLQAC--NIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRPLKIYSTTVFLESYIDDFIEPAGWTEWSGDQGLDTLYYGEFNNYGPGSGTDNRVTW 437 TL+ R ++ C + G +D+I G+ + Q+C ++ PG ITAQ + + N+ G NC + K+YLGR + YS +F S + D ++P GW EW+ L Y E +G GS T R W Sbjct: 162 TLWDSDGRHYFHRCTIQGAVDFILGSGQSIYQSCVIQVLGGQLGPGVTGYITAQGRTNANDANGFVFINCLV---------HGFGKAYLGRAWRPYSRVIFYNSNLTDVVDPLGWWEWNYQGYEKQLTYAEHGCFGSGSNTSRRAKW 299
BLAST of CX287176 vs. ExPASy Swiss-Prot
Match: PME29_ARATH (Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14 Identity = 47/179 (26.26%), Postives = 77/179 (43.02%), Query Frame = 3 Query: 3 TLYAHSFRQFYRECDVYGTIDYIFGNAAVVLQAC--NIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRPLKIYSTTVFLESYIDDFIEPAGWTEWSGDQGLDTLYYGEFNNYGPGSGTDNRVTWPGYHVMDENDAYAFTVSQLIDGQEWLDSTSIP 533 TL+ R ++ C + G +D+IFG + Q+C ++ PG ITAQ + +P + G NC + T ++LGRP + YS +F S + D + P GW W+ + L + E +G G+ RV W + E+ I+ W++ IP Sbjct: 167 TLWDFDGRHYFHRCTIQGAVDFIFGTGQSIYQSCVIQVLGGQLEPGLAGYITAQGRTNPYDANGFIFINCLVYGTG---------MAFLGRPWRGYSRVIFYNSNLTDVVVPEGWDAWNFVGHENQLVFAEHGCFGSGANIGRRVKW--VKKLSESAIQNLADLSFINRGGWVEDLPIP 334
BLAST of CX287176 vs. ExPASy Swiss-Prot
Match: PME50_ARATH (Probable pectinesterase 50 OS=Arabidopsis thaliana GN=PME50 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.516e-12 Identity = 51/173 (29.48%), Postives = 81/173 (46.82%), Query Frame = 3 Query: 3 TLYAHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQ-FTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRPLKIYSTTVFLESYIDDFIEPAGWTEWSGDQGLD-TLYYGEFNNYGPGSGTDNRVTWPGYHVMDENDAYAFTVSQLIDGQEWL 515 TL F+++C + GT D+IFG A + + ++L G VITAQ + E G + +C + T YLGR + V+ + + + P+GW E + ++G D T++YGE+ +GPGS + RV P +D+N+ F I G WL Sbjct: 198 TLCDDKGNHFFKDCYIEGTYDFIFGRGASLY----LNTQLHAVGDGLRVITAQGRQSATEQNGYTFVHCKVTGT--------GTGIYLGRSWMSHPKVVYAFTEMTSVVNPSGWRE-NLNRGYDKTVFYGEYKCFGPGSHLEKRV--PYTQDIDKNEVTPFLTLGYIKGSTWL 355
BLAST of CX287176 vs. ExPASy Swiss-Prot
Match: PME52_ARATH (Putative pectinesterase 52 OS=Arabidopsis thaliana GN=PME52 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 46/180 (25.56%), Postives = 78/180 (43.33%), Query Frame = 3 Query: 3 TLYAHSFRQFYRECDVYGTIDYIFGNAAVVLQACNI---VSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRPLKIYSTTVFLESYIDDFIEPAGWTEWSGDQGLDTLYYGEFNNYGPGSGTDNRVTWPGYHVMDENDAY----AFTVSQLIDGQEWLDS 521 T++ + R ++ C + G ID+IFG+ V + C+I L F ITAQ + ++ +G S+ S S YLGR +S +F+++ + + P GW W + Y E G GS RV W +D+ ++ F++S ID +W+ + Sbjct: 124 TVWDNLGRHHFKNCYIEGAIDFIFGSGQSVYEDCHINATAGALASKVSFGYITAQGRSSDSDPSGFVFLRGSV---------SGSTSVYLGRAYGPFSRVIFIQTDLSSVVHPEGWYSWHYGGYEMSFTYAEVECKGAGSDMSRRVPW-----IDKLHSFYTKQQFSISNFIDQDQWISN 289 The following BLAST results are available for this feature:
BLAST of CX287176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287176 ID=CX287176; Name=CX287176; organism=Citrus clementina; type=EST; length=687bpback to top |