CX287190

Overview
NameCX287190
Unique NameCX287190
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length652
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX287190 vs. ExPASy Swiss-Prot
Match: CALM_PROMN (Calmodulin OS=Prorocentrum minimum PE=2 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 3.997e-73
Identity = 136/147 (92.52%), Postives = 144/147 (97.96%), Query Frame = 1 
Query:   10 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 450
            DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD+D NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMAK 149
[Close]
BLAST of CX287190 vs. ExPASy Swiss-Prot
Match: CALM_PFIPI (Calmodulin OS=Pfiesteria piscicida PE=2 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 3.997e-73
Identity = 136/147 (92.52%), Postives = 144/147 (97.96%), Query Frame = 1 
Query:   10 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 450
            DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD+D NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMAK 149
[Close]
BLAST of CX287190 vs. ExPASy Swiss-Prot
Match: CALM_KARMI (Calmodulin OS=Karlodinium micrum PE=2 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 3.997e-73
Identity = 136/147 (92.52%), Postives = 144/147 (97.96%), Query Frame = 1 
Query:   10 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 450
            DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD+D NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMAK 149
[Close]
BLAST of CX287190 vs. ExPASy Swiss-Prot
Match: CALM_ALEFU (Calmodulin OS=Alexandrium fundyense PE=2 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 3.997e-73
Identity = 136/147 (92.52%), Postives = 144/147 (97.96%), Query Frame = 1 
Query:   10 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 450
            DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD+D NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMAK 149
[Close]
BLAST of CX287190 vs. ExPASy Swiss-Prot
Match: CALM2_PETHY (Calmodulin-2 OS=Petunia hybrida GN=CAM72 PE=2 SV=2)

HSP 1 Score: 274.248 bits (700), Expect = 3.997e-73
Identity = 132/147 (89.80%), Postives = 146/147 (99.32%), Query Frame = 1 
Query:   10 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 450
            +QLT++QI+EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMI+EVDAD NGTIDFPEFLNLMARKMKDTDSEEELKEAF+VFDKDQNG+ISAA++RHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M+AK
Sbjct:    3 EQLTEEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMISEVDADQNGTIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGYISAADVRHVMTNLGEKLTDEEVDEMIREADMDGDGQVNYEEFVRMMLAK 149
[Close]
BLAST of CX287190 vs. ExPASy Swiss-Prot
Match: CALM_MACPY (Calmodulin OS=Macrocystis pyrifera PE=2 SV=3)

HSP 1 Score: 273.863 bits (699), Expect = 5.221e-73
Identity = 134/147 (91.16%), Postives = 143/147 (97.28%), Query Frame = 1 
Query:   10 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 450
            DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE+ EAF+VFDKD NGFISAAELRH+MTNLGEKLTDEEVDEMIREAD+DGDGQINYEEFVK+MMAK
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIIEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMAK 149
[Close]
BLAST of CX287190 vs. ExPASy Swiss-Prot
Match: CALM_METSE (Calmodulin OS=Metridium senile PE=1 SV=3)

HSP 1 Score: 273.478 bits (698), Expect = 6.819e-73
Identity = 133/147 (90.48%), Postives = 143/147 (97.28%), Query Frame = 1 
Query:   10 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 450
            DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFVK+M +K
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVKMMTSK 149
[Close]
BLAST of CX287190 vs. ExPASy Swiss-Prot
Match: CALM_LUMRU (Calmodulin OS=Lumbricus rubellus PE=2 SV=3)

HSP 1 Score: 273.478 bits (698), Expect = 6.819e-73
Identity = 133/147 (90.48%), Postives = 143/147 (97.28%), Query Frame = 1 
Query:   10 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 450
            DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +MM+K
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMMSK 149
[Close]
BLAST of CX287190 vs. ExPASy Swiss-Prot
Match: CALM_PYTSP (Calmodulin OS=Pythium splendens PE=2 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 8.905e-73
Identity = 133/147 (90.48%), Postives = 143/147 (97.28%), Query Frame = 1 
Query:   10 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 450
            DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE+ EAF+VFDKD NGFISAAELRH+MTNLGEKLTDEEVDEMIREAD+DGDGQINYEEFVK+MM+K
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMSK 149
[Close]
BLAST of CX287190 vs. ExPASy Swiss-Prot
Match: CALM_PHYIN (Calmodulin OS=Phytophthora infestans GN=CMD1 PE=3 SV=2)

HSP 1 Score: 273.092 bits (697), Expect = 8.905e-73
Identity = 133/147 (90.48%), Postives = 143/147 (97.28%), Query Frame = 1 
Query:   10 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 450
            DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE+ EAF+VFDKD NGFISAAELRH+MTNLGEKLTDEEVDEMIREAD+DGDGQINYEEFVK+MM+K
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMSK 149
The following BLAST results are available for this feature:
BLAST of CX287190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 484
Match NameE-valueIdentityDescription
CALM_PROMN3.997e-7392.52Calmodulin OS=Prorocentrum minimum PE=2 SV=1[more]
CALM_PFIPI3.997e-7392.52Calmodulin OS=Pfiesteria piscicida PE=2 SV=1[more]
CALM_KARMI3.997e-7392.52Calmodulin OS=Karlodinium micrum PE=2 SV=1[more]
CALM_ALEFU3.997e-7392.52Calmodulin OS=Alexandrium fundyense PE=2 SV=1[more]
CALM2_PETHY3.997e-7389.80Calmodulin-2 OS=Petunia hybrida GN=CAM72 PE=2 SV=2[more]
CALM_MACPY5.221e-7391.16Calmodulin OS=Macrocystis pyrifera PE=2 SV=3[more]
CALM_METSE6.819e-7390.48Calmodulin OS=Metridium senile PE=1 SV=3[more]
CALM_LUMRU6.819e-7390.48Calmodulin OS=Lumbricus rubellus PE=2 SV=3[more]
CALM_PYTSP8.905e-7390.48Calmodulin OS=Pythium splendens PE=2 SV=1[more]
CALM_PHYIN8.905e-7390.48Calmodulin OS=Phytophthora infestans GN=CMD1 PE=3 ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC01005G01SK Veg1 Citrus clementina cDNA clone C01005G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287190 ID=CX287190; Name=CX287190; organism=Citrus clementina; type=EST; length=652bp
GGCACGAGGGATCAGCTCACGGACGATCAGATCTCTGAGTTCAAAGAGGC
CTTCAGCTTGTTTGACAAGGATGGCGACGGTTGCATTACCACCAAGGAGC
TTGGCACTGTTATGAGGTCACTGGGTCAGAACCCCACTGAGGCTGAGCTC
CAGGACATGATCAATGAAGTGGATGCTGATGGTAATGGAACTATTGATTT
TCCTGAATTCCTAAACCTCATGGCCAGGAAGATGAAGGATACCGACTCTG
AGGAGGAGCTGAAAGAGGCCTTCCGGGTTTTCGACAAGGATCAGAATGGT
TTCATCTCAGCTGCTGAGCTGCGCCATGTGATGACAAACCTAGGAGAGAA
ACTTACTGATGAAGAAGTTGATGAGATGATAAGGGAAGCTGATGTTGATG
GTGATGGCCAGATAAATTATGAGGAATTTGTCAAGGTTATGATGGCCAAG
TAATGACCCCAACCCACCAATACTTATAAAATGGGTTGACTAAATTATAA
AGGGATTCCTAGTTTTCTCTTTTACAATTTTTAATTTGATAGTCATGAGG
GTCAGGCTAAAGGAAGCAATGGTCTTTTAATGGTGATGGGCCTGATGGTG
TAGGAAGAATGTTGTCTCCCTCGTCAATATGTCTTGTGACTCGCAAAACT
TT
back to top