CX287190
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287190 vs. ExPASy Swiss-Prot
Match: MLC1_DROME (Myosin light chain alkali OS=Drosophila melanogaster GN=Mlc1 PE=2 SV=4) HSP 1 Score: 67.3958 bits (163), Expect = 7.422e-11 Identity = 43/144 (29.86%), Postives = 75/144 (52.08%), Query Frame = 1 Query: 28 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA--RKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DVDGDGQINYEEFVKVMMA 447 ++ + F + G+G I +LG +R+L NPT A L + + I EFL + + +K K+ E+ E +++DK++NG + AEL+H + LGE L DE+V+ + + D +G I Y +FV+ +M+ Sbjct: 8 EVENVEFVFEVMGSPGEG-IDAVDLGDALRALNLNPTLA-LIEKLGGTKKRNEKKIKLDEFLPIYSQVKKEKEQGCYEDFIECLKLYDKEENGTMLLAELQHALLALGESLDDEQVETLFADCMDPEDDEGFIPYSQFVQRLMS 149
BLAST of CX287190 vs. ExPASy Swiss-Prot
Match: CML29_ORYSJ (Probable calcium-binding protein CML29 OS=Oryza sativa subsp. japonica GN=CML29 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.422e-11 Identity = 47/136 (34.56%), Postives = 72/136 (52.94%), Query Frame = 1 Query: 31 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM-ARKMKDTDSEEELKEAFRVFDK--DQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 429 IS EAF FD D DG +T EL ++ SLG + E E++DM+ DAD +G + E L++M A ++ L+ A + +G + A EL +++ +G + E+ E+I D DGDG I+ EEF Sbjct: 29 ISSLVEAFQAFDSDNDGLVTAPELRGLLASLGLDKPEHEVRDMLARADADRDGKLSVEELLDVMNAGQLGLGALGALLQSAVPALESAAGPDGVLGADELARLLSVMG-TASVEDCMEIIACMDGDGDGAISVEEF 163
BLAST of CX287190 vs. ExPASy Swiss-Prot
Match: ACTN2_MOUSE (Alpha-actinin-2 OS=Mus musculus GN=Actn2 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.422e-11 Identity = 37/109 (33.94%), Postives = 65/109 (59.63%), Query Frame = 1 Query: 4 TRDQ--LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELR 324 TRD +T Q++EF+ +F+ FD+ +G + ++ + S+G + EAE ++ VD +G GT+ F F++ M R+ DTD+ E++ +FR+ D+ +I A ELR Sbjct: 744 TRDAKGITQKQMNEFRASFNHFDRRKNGLMDHEDFRACLISMGYDLGEAEFARIMTLVDPNGQGTVTFQSFIDFMTRETADTDTAEQVIASFRILASDK-PYILAEELR 851
BLAST of CX287190 vs. ExPASy Swiss-Prot
Match: SCMC1_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Homo sapiens GN=SLC25A24 PE=1 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 9.693e-11 Identity = 35/135 (25.93%), Postives = 74/135 (54.81%), Query Frame = 1 Query: 25 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 429 +Q + ++ F D++GDG + EL +R+LG + + + D + +G +DF EF+ + D E+++K AF+ DK+ +G I A+E+ + LG +++++ + +++ DVDG +++ E+ Sbjct: 19 EQPTRYETLFQALDRNGDGVVDIGELQEGLRNLGIPLGQDAEEKIFTTGDVNKDGKLDFEEFMKYLK------DHEKKMKLAFKSLDKNNDGKIEASEIVQSLQTLGLTISEQQAELILQSIDVDGTMTVDWNEW 147 The following BLAST results are available for this feature:
BLAST of CX287190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 484
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287190 ID=CX287190; Name=CX287190; organism=Citrus clementina; type=EST; length=652bpback to top |