CX287190

Overview
NameCX287190
Unique NameCX287190
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length652
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig445 contig Ccv1_Contig445:84..735. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287190 vs. ExPASy Swiss-Prot
Match: CALM_CIOIN (Calmodulin OS=Ciona intestinalis PE=2 SV=3)

HSP 1 Score: 270.781 bits (691), Expect = 4.420e-72
Identity = 133/147 (90.48%), Postives = 141/147 (95.92%), Query Frame = 1
Query:   10 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 450
            DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQ+NYEEFV +M  K
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVNMMTNK 149          
BLAST of CX287190 vs. ExPASy Swiss-Prot
Match: CALM_CAEEL (Calmodulin OS=Caenorhabditis elegans GN=cmd-1 PE=1 SV=3)

HSP 1 Score: 270.781 bits (691), Expect = 4.420e-72
Identity = 132/147 (89.80%), Postives = 141/147 (95.92%), Query Frame = 1
Query:   10 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 450
            DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M  K
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTTK 149          
BLAST of CX287190 vs. ExPASy Swiss-Prot
Match: CALM_TRYBG (Calmodulin OS=Trypanosoma brucei gambiense PE=3 SV=2)

HSP 1 Score: 270.396 bits (690), Expect = 5.772e-72
Identity = 133/147 (90.48%), Postives = 143/147 (97.28%), Query Frame = 1
Query:   10 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 450
            DQL+++QISEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVD DG+GTIDFPEFL LMARKM+D+DSEEE+KEAFRVFDKD NGFISAAELRH+MTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MM+K
Sbjct:    3 DQLSNEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTLMARKMQDSDSEEEIKEAFRVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMSK 149          

HSP 2 Score: 70.0922 bits (170), Expect = 1.145e-11
Identity = 33/75 (44.00%), Postives = 47/75 (62.67%), Query Frame = 1
Query:    7 RDQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 231
            R     D   E KEAF +FDKDG+G I+  EL  +M +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:   75 RKMQDSDSEEEIKEAFRVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMSK 149          
BLAST of CX287190 vs. ExPASy Swiss-Prot
Match: CALM_TRYBB (Calmodulin OS=Trypanosoma brucei brucei PE=3 SV=2)

HSP 1 Score: 270.396 bits (690), Expect = 5.772e-72
Identity = 133/147 (90.48%), Postives = 143/147 (97.28%), Query Frame = 1
Query:   10 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 450
            DQL+++QISEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVD DG+GTIDFPEFL LMARKM+D+DSEEE+KEAFRVFDKD NGFISAAELRH+MTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MM+K
Sbjct:    3 DQLSNEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTLMARKMQDSDSEEEIKEAFRVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMSK 149          

HSP 2 Score: 70.0922 bits (170), Expect = 1.145e-11
Identity = 33/75 (44.00%), Postives = 47/75 (62.67%), Query Frame = 1
Query:    7 RDQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 231
            R     D   E KEAF +FDKDG+G I+  EL  +M +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:   75 RKMQDSDSEEEIKEAFRVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMSK 149          
BLAST of CX287190 vs. ExPASy Swiss-Prot
Match: CALM_PLECO (Calmodulin OS=Pleurotus cornucopiae GN=CMD1 PE=1 SV=2)

HSP 1 Score: 270.396 bits (690), Expect = 5.772e-72
Identity = 131/147 (89.12%), Postives = 143/147 (97.28%), Query Frame = 1
Query:   10 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 450
            DQL+++QISEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKM+DTDSEEE+KEAF+VFDKD NG+ISAAELRHVMTNLGEKLTD EVDEMIREAD+DGDGQINYEEFVK+M++K
Sbjct:    3 DQLSEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDNEVDEMIREADIDGDGQINYEEFVKMMLSK 149          
BLAST of CX287190 vs. ExPASy Swiss-Prot
Match: CALM_STIJA (Calmodulin OS=Stichopus japonicus PE=1 SV=2)

HSP 1 Score: 270.011 bits (689), Expect = 7.539e-72
Identity = 131/147 (89.12%), Postives = 142/147 (96.60%), Query Frame = 1
Query:   10 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 450
            DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 149          
BLAST of CX287190 vs. ExPASy Swiss-Prot
Match: CALM_MYXGL (Calmodulin OS=Myxine glutinosa PE=2 SV=3)

HSP 1 Score: 270.011 bits (689), Expect = 7.539e-72
Identity = 131/147 (89.12%), Postives = 143/147 (97.28%), Query Frame = 1
Query:   10 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 450
            DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEV+ADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVNADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149          
BLAST of CX287190 vs. ExPASy Swiss-Prot
Match: CALM_RENRE (Calmodulin OS=Renilla reniformis PE=1 SV=2)

HSP 1 Score: 269.626 bits (688), Expect = 9.846e-72
Identity = 131/147 (89.12%), Postives = 143/147 (97.28%), Query Frame = 1
Query:   10 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 450
            DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADG+GTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD +GFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFVK+M +K
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVKMMTSK 149          
BLAST of CX287190 vs. ExPASy Swiss-Prot
Match: CALM_PYUSP (Calmodulin OS=Pyuridae sp. PE=1 SV=2)

HSP 1 Score: 269.24 bits (687), Expect = 1.286e-71
Identity = 131/147 (89.12%), Postives = 142/147 (96.60%), Query Frame = 1
Query:   10 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 450
            DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADG+GTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 149          
BLAST of CX287190 vs. ExPASy Swiss-Prot
Match: CALMB_HALRO (Calmodulin-B OS=Halocynthia roretzi PE=3 SV=3)

HSP 1 Score: 269.24 bits (687), Expect = 1.286e-71
Identity = 131/147 (89.12%), Postives = 141/147 (95.92%), Query Frame = 1
Query:   10 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 450
            DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMK+TDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M  K
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTCK 149          
The following BLAST results are available for this feature:
BLAST of CX287190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 484
Match NameE-valueIdentityDescription
CALM_CIOIN4.420e-7290.48Calmodulin OS=Ciona intestinalis PE=2 SV=3[more]
CALM_CAEEL4.420e-7289.80Calmodulin OS=Caenorhabditis elegans GN=cmd-1 PE=1... [more]
CALM_TRYBG5.772e-7290.48Calmodulin OS=Trypanosoma brucei gambiense PE=3 SV... [more]
CALM_TRYBB5.772e-7290.48Calmodulin OS=Trypanosoma brucei brucei PE=3 SV=2[more]
CALM_PLECO5.772e-7289.12Calmodulin OS=Pleurotus cornucopiae GN=CMD1 PE=1 S... [more]
CALM_STIJA7.539e-7289.12Calmodulin OS=Stichopus japonicus PE=1 SV=2[more]
CALM_MYXGL7.539e-7289.12Calmodulin OS=Myxine glutinosa PE=2 SV=3[more]
CALM_RENRE9.846e-7289.12Calmodulin OS=Renilla reniformis PE=1 SV=2[more]
CALM_PYUSP1.286e-7189.12Calmodulin OS=Pyuridae sp. PE=1 SV=2[more]
CALMB_HALRO1.286e-7189.12Calmodulin-B OS=Halocynthia roretzi PE=3 SV=3[more]

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Properties
Property NameValue
Genbank descriptionC01005G01SK Veg1 Citrus clementina cDNA clone C01005G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287190 ID=CX287190; Name=CX287190; organism=Citrus clementina; type=EST; length=652bp
GGCACGAGGGATCAGCTCACGGACGATCAGATCTCTGAGTTCAAAGAGGC
CTTCAGCTTGTTTGACAAGGATGGCGACGGTTGCATTACCACCAAGGAGC
TTGGCACTGTTATGAGGTCACTGGGTCAGAACCCCACTGAGGCTGAGCTC
CAGGACATGATCAATGAAGTGGATGCTGATGGTAATGGAACTATTGATTT
TCCTGAATTCCTAAACCTCATGGCCAGGAAGATGAAGGATACCGACTCTG
AGGAGGAGCTGAAAGAGGCCTTCCGGGTTTTCGACAAGGATCAGAATGGT
TTCATCTCAGCTGCTGAGCTGCGCCATGTGATGACAAACCTAGGAGAGAA
ACTTACTGATGAAGAAGTTGATGAGATGATAAGGGAAGCTGATGTTGATG
GTGATGGCCAGATAAATTATGAGGAATTTGTCAAGGTTATGATGGCCAAG
TAATGACCCCAACCCACCAATACTTATAAAATGGGTTGACTAAATTATAA
AGGGATTCCTAGTTTTCTCTTTTACAATTTTTAATTTGATAGTCATGAGG
GTCAGGCTAAAGGAAGCAATGGTCTTTTAATGGTGATGGGCCTGATGGTG
TAGGAAGAATGTTGTCTCCCTCGTCAATATGTCTTGTGACTCGCAAAACT
TT
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