CX287192

Overview
NameCX287192
Unique NameCX287192
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length630
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287192 vs. ExPASy Swiss-Prot
Match: ADHL6_ARATH (Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana GN=At5g24760 PE=2 SV=2)

HSP 1 Score: 226.483 bits (576), Expect = 8.922e-59
Identity = 102/209 (48.80%), Postives = 139/209 (66.51%), Query Frame = 1
Query:    1 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMKAALECCHKGWG 627
            VTE + GDHV+  +  EC  C+ C SGK+N+C +V G    G+M +D+K+RFSI GKP+YH+   S+FS+YTVVH     K+DP APL K+CLL CGV  GLGA WN A V+ GS V +FGLGTV             ++++G+DI+P K ++AK FGVT+F+N  D  +PI QV+  +T GG D+SFEC+G+  +   AL+ C  GWG
Sbjct:   85 VTEFEKGDHVLAVFTGECGSCRHCISGKSNMC-QVLGMERKGLMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVQKGSSVVIFGLGTVGLSVAQGAKLRGAAQILGVDINPAKAEQAKTFGVTDFINSNDLSEPIPQVIKRMTGGGADFSFECVGDTGIATTALQSCSDGWG 292          
BLAST of CX287192 vs. ExPASy Swiss-Prot
Match: FADH_CANMA (S-(hydroxymethyl)glutathione dehydrogenase OS=Candida maltosa GN=FDH1 PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 3.390e-58
Identity = 115/212 (54.25%), Postives = 136/212 (64.15%), Query Frame = 1
Query:    1 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPK--DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMKAALECCHKGWGT 630
            VT V+ GDHVI  Y  EC ECKFCKSGKTNLCGK+R   G GVM  D  SRF+  GK I HFMG STFSQYTVV D+SV  I+P+A  DK CLLGCG+ TG GA   TA V+ G  VAVFG G V             +++I +DI  KK +  +  G T FVNP        I   L+++TDGG D++F+C GNV VM+ ALE CHKGWGT
Sbjct:   84 VTNVKVGDHVIALYTPECGECKFCKSGKTNLCGKIRATQGKGVMP-DGTSRFTCKGKEILHFMGCSTFSQYTVVADISVVAINPKAEFDKACLLGCGITTGYGAATITANVQKGDNVAVFGGGIVGLSVIQGCAERGAAQIILVDISDKKEEWGQKLGATAFVNPTKLPEGTTIVDKLIEMTDGGCDFTFDCTGNVGVMRNALEACHKGWGT 294          
BLAST of CX287192 vs. ExPASy Swiss-Prot
Match: FADH1_SCHPO (Probable S-(hydroxymethyl)glutathione dehydrogenase 1 OS=Schizosaccharomyces pombe GN=SPBC1539.07c PE=2 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 1.288e-57
Identity = 112/209 (53.59%), Postives = 139/209 (66.51%), Query Frame = 1
Query:    1 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMKAALECCHKGWG 627
            V  V+PGDHVI  Y  EC+ECKFC+SGKTNLC K+R   G G +M D  SRFS   K + H+MG S+FSQYTVV D+S+  I   APL  +CLLGCGV TG GAV ++AKVE GS VAV G G V             SR+I IDI+  K   AK FG T+F++     K + Q ++D+TDGGVDY+F+C GNV+VM+  L+ CHKGWG
Sbjct:   82 VINVRPGDHVILLYTPECKECKFCRSGKTNLCSKIRETQGRG-LMPDGTSRFSCRDKTLLHYMGCSSFSQYTVVADISLVAISHSAPLRSICLLGCGVTTGFGAVTHSAKVESGSTVAVVGCGCVGLAAMQGAVAAGASRIIAIDINADKEVYAKKFGATDFID-SSKVKDLVQYVIDVTDGGVDYAFDCTGNVTVMQQELQFCHKGWG 288          
BLAST of CX287192 vs. ExPASy Swiss-Prot
Match: FADH_PARDE (S-(hydroxymethyl)glutathione dehydrogenase OS=Paracoccus denitrificans GN=flhA PE=1 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 4.895e-57
Identity = 109/216 (50.46%), Postives = 145/216 (67.13%), Query Frame = 1
Query:    1 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFS-INGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTD------GGVDYSFECIGNVSVMKAALECCHKGWG 627
            VT V+PG+HVIP Y  ECR+C  C SGKTNLC  +R   G G +M D  SRFS ++G PI+H+MG STFS YTV+ +++VAK+   AP DK+C +GCGV TG+GAV NTAKVE G+   VFGLG +               +IG+D++  K   A++FG+T F+NPK+ +  +Q++ V+LT       GG DYSF+C GNV VM+ ALEC H+GWG
Sbjct:   75 VTSVKPGNHVIPLYTPECRQCASCLSGKTNLCTAIRATQGQG-LMPDGTSRFSMLDGTPIFHYMGCSTFSNYTVLPEIAVAKVREDAPFDKICYIGCGVTTGIGAVINTAKVEIGAKAVVFGLGGIGLNVLQGLRLAGADMIIGVDLNDDKKPMAEHFGMTHFINPKNCENVVQEI-VNLTKTPFDQIGGADYSFDCTGNVKVMRDALECTHRGWG 288          
BLAST of CX287192 vs. ExPASy Swiss-Prot
Match: FADH_PICPA (S-(hydroxymethyl)glutathione dehydrogenase OS=Pichia pastoris GN=FLD1 PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 6.394e-57
Identity = 110/211 (52.13%), Postives = 133/211 (63.03%), Query Frame = 1
Query:    1 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPK--DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMKAALECCHKGWG 627
            V  V+ GD V+  Y  ECRECKFC SGKTNLCGK+R   G G ++ D  SRF   GK ++H+MG S+FSQYTVV D+SV K+  +AP DK CLLGCGV TG GA  NTAK+  G  + VFG G +             S +I IDI+  K   A  FG T+FVNP        I   L+D+TDGG DY+F+C GNV VM+ ALE CHKGWG
Sbjct:   82 VESVKVGDSVVLLYTPECRECKFCLSGKTNLCGKIRATQGKG-LLPDGTSRFRCKGKDLFHYMGCSSFSQYTVVADISVVKVQDEAPKDKTCLLGCGVTTGYGAAINTAKISKGDKIGVFGAGCIGLSVIQGAVSKGASEIIVIDINDSKKAWADQFGATKFVNPTTLPEGTNIVDYLIDITDGGFDYTFDCTGNVQVMRNALESCHKGWG 291          
BLAST of CX287192 vs. ExPASy Swiss-Prot
Match: ADHI_RHOS4 (Alcohol dehydrogenase class-3 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=adhI PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 6.394e-57
Identity = 109/216 (50.46%), Postives = 141/216 (65.28%), Query Frame = 1
Query:    1 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFS-INGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTD------GGVDYSFECIGNVSVMKAALECCHKGWG 627
            VT V+PGDHVIP Y  ECR+C  C S KTNLC  +RG  G G +M D  SRFS ++G PI H+MG STFS YTV+ +++VAK+ P AP DK+C +GCGV TG+GAV NTAKVE G+   VFGLG +               +IG+D++  K +  + FG+T FVNP + D  +   LV++T       GG DY+F+C GNV VM+ ALE CH+GWG
Sbjct:   75 VTSVKPGDHVIPLYTPECRQCPSCLSQKTNLCTAIRGTQGQG-LMPDGTSRFSMLDGTPILHYMGCSTFSNYTVLPEIAVAKVRPDAPFDKICYIGCGVTTGIGAVINTAKVEIGAKAVVFGLGGIGLNVIQGLKLAGADMIIGVDLNNAKKEWGERFGMTHFVNPSEIDGDVVAHLVNMTKTPFDQIGGADYTFDCTGNVKVMRQALEACHRGWG 289          
BLAST of CX287192 vs. ExPASy Swiss-Prot
Match: ADH4_MOUSE (Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE=1 SV=3)

HSP 1 Score: 219.935 bits (559), Expect = 8.350e-57
Identity = 105/213 (49.30%), Postives = 141/213 (66.20%), Query Frame = 1
Query:    1 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGV---MMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMKAALECCHKGWGT 630
            VT  +PGD VIP +  +C+ CK C S  TNLCGK+R      +   +M DR SRF+  G+ IYHFMG S+FSQYTVV + ++A++D +A L++VCL+GCG  +G GA  NTAKV PGS  AVFGLG V             SR+I IDI+ +KF +AK  G T+ +NP++ DKP+Q V+ +LT GGVDYS +C G    +KAA++C   GWG+
Sbjct:   81 VTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGS 293          
BLAST of CX287192 vs. ExPASy Swiss-Prot
Match: ADH1_STRCA (Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH1 PE=1 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 8.350e-57
Identity = 112/209 (53.59%), Postives = 136/209 (65.07%), Query Frame = 1
Query:    1 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMKAALECCHKGWG 627
            VT V+PGD VIP +  +C EC  C S K NLC K      A  +M D  SRF+  GK I+HF GTSTF++YTV+H+ +VAKID  APL+KVCL+GCG  TG GA   TAKVEPGS  AVFGLG V             SR+IG+DI+  KF +AK  G T+ VNPKD  KPI +VL+++T  GVDYSFE IG+   M AAL  CH  +G
Sbjct:   80 VTSVKPGDKVIPLFVPQCGECSVCLSTKGNLCRK-NDIGPASALMPDGTSRFTCKGKAIHHFAGTSTFTEYTVLHETAVAKIDAAAPLEKVCLIGCGFSTGYGAALQTAKVEPGSTCAVFGLGGVGLSVVMGCKAAGASRIIGVDINKDKFAKAKELGATDCVNPKDFTKPIHEVLMEMTGLGVDYSFEVIGHTETMAAALASCHFNYG 287          
BLAST of CX287192 vs. ExPASy Swiss-Prot
Match: ADH1B_PAPHA (Alcohol dehydrogenase 1B OS=Papio hamadryas GN=ADH1B PE=2 SV=2)

HSP 1 Score: 219.935 bits (559), Expect = 8.350e-57
Identity = 108/210 (51.43%), Postives = 141/210 (67.14%), Query Frame = 1
Query:    1 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMKAALECCHKGWGT 630
            VT V+PGD VIP +  +C +C+ CKS + N C K   +   G +  D   RF+  GKPI+HF+GTSTFSQYTVV + +VAKID  +PL+KVCL+GCG  TG G+  N AKV PGS+ AVFGLG V             +R+I +DI+  KF +AK  G TE +NP+D+ KPIQ+VL ++TDGGVD+SFE IG +  M A+L CCH+  GT
Sbjct:   81 VTTVKPGDKVIPLFTPQCGKCRVCKSPEGNYCVKNDLSNPRGTLQ-DGTRRFTCRGKPIHHFVGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSVCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGT 289          
BLAST of CX287192 vs. ExPASy Swiss-Prot
Match: ADH1_NAJNA (Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.091e-56
Identity = 114/211 (54.03%), Postives = 139/211 (65.88%), Query Frame = 1
Query:    1 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMKAALECCHKGWGT 630
            VT V+PGD VIP +  +C +C+ C+S K NLC      +G+G +M D  SRF+  GK I+HF+ TSTF++YTVVH+ SV KIDP APL+KVCL+GCG  TG GA   TAKVEPGSI AVFGLG V             SR+IG+DI+  KF +AK  G TE +NP D  KPI +VL DLT G GVDYSFE IG    M +A   CH+  GT
Sbjct:   80 VTCVKPGDKVIPLFAPQCGKCRACQSPKGNLCTSNDLNSGSG-LMPDGTSRFTCKGKSIHHFISTSTFTEYTVVHENSVVKIDPSAPLEKVCLIGCGFSTGYGAAMQTAKVEPGSICAVFGLGGVGLSVVMGCKAAGASRIIGVDINKDKFAKAKEMGATECINPLDFKKPINEVLFDLTGGEGVDYSFEVIGRTETMISAFTSCHQNLGT 289          
The following BLAST results are available for this feature:
BLAST of CX287192 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
ADHL6_ARATH8.922e-5948.80Alcohol dehydrogenase-like 6 OS=Arabidopsis thalia... [more]
FADH_CANMA3.390e-5854.25S-(hydroxymethyl)glutathione dehydrogenase OS=Cand... [more]
FADH1_SCHPO1.288e-5753.59Probable S-(hydroxymethyl)glutathione dehydrogenas... [more]
FADH_PARDE4.895e-5750.46S-(hydroxymethyl)glutathione dehydrogenase OS=Para... [more]
FADH_PICPA6.394e-5752.13S-(hydroxymethyl)glutathione dehydrogenase OS=Pich... [more]
ADHI_RHOS46.394e-5750.46Alcohol dehydrogenase class-3 OS=Rhodobacter sphae... [more]
ADH4_MOUSE8.350e-5749.30Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE... [more]
ADH1_STRCA8.350e-5753.59Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH... [more]
ADH1B_PAPHA8.350e-5751.43Alcohol dehydrogenase 1B OS=Papio hamadryas GN=ADH... [more]
ADH1_NAJNA1.091e-5654.03Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC01005G03SK Veg1 Citrus clementina cDNA clone C01005G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287192 ID=CX287192; Name=CX287192; organism=Citrus clementina; type=EST; length=630bp
GTGACCGAGGTTCAACCAGGTGATCATGTCATCCCTTGTTACCAGGCAGA
ATGCCGAGAGTGCAAGTTTTGCAAGTCTGGAAAGACTAACCTCTGTGGTA
AGGTTAGGGGTGCCACTGGTGCTGGTGTCATGATGAATGACCGCAAGAGC
CGTTTCTCGATAAATGGAAAGCCTATCTATCACTTCATGGGAACCTCAAC
ATTTAGCCAGTACACAGTTGTGCATGATGTTAGTGTTGCAAAGATTGACC
CACAAGCTCCTTTGGACAAAGTATGCCTTCTTGGCTGTGGTGTTCCTACT
GGTCTTGGAGCAGTTTGGAACACTGCAAAAGTAGAGCCGGGTTCTATAGT
TGCTGTTTTTGGCCTTGGGACTGTTGGCCTTGCTGTGGCAGAGGGTGCAA
AGGCAGCTGGAGCTTCACGTGTTATTGGTATAGATATTGACCCAAAAAAG
TTTGATAGAGCAAAGAATTTTGGAGTTACTGAATTTGTAAATCCCAAGGA
CCATGACAAACCCATTCAGCAGGTCCTTGTCGATCTCACGGATGGTGGTG
TTGACTATAGTTTTGAATGCATTGGCAATGTCTCTGTGATGAAGGCAGCT
TTGGAATGCTGTCACAAGGGCTGGGGAACA
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