CX287199
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287199 vs. ExPASy Swiss-Prot
Match: DHH1_DEBHA (ATP-dependent RNA helicase DHH1 OS=Debaryomyces hansenii GN=DHH1 PE=3 SV=2) HSP 1 Score: 311.227 bits (796), Expect = 2.838e-84 Identity = 150/212 (70.75%), Postives = 178/212 (83.96%), Query Frame = 3 Query: 6 RELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 641 RELALQTSQV + LGKHL +Q MVTTGGTSL+DDI+RL PVH+LVGTPGR+LDL+ + V L +C + VMDEADK+LS EF+ +EQ++ F P RQ L+FSATFP+ VK F D++L KPY INLMDELTL+GI+Q+YAFVEE+QK+HCLNTLFSKLQINQ+IIFCNS NRVELLAKKITELGYSC+Y HAKM Q RN+VFH+FR G R Sbjct: 108 RELALQTSQVVRTLGKHLGLQCMVTTGGTSLRDDILRLNDPVHVLVGTPGRVLDLASRKVADLSECPLFVMDEADKMLSREFKGIIEQILAFFPTTRQSLLFSATFPLAVKSFMDQHLTKPYEINLMDELTLRGISQFYAFVEEKQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQHARNKVFHEFRQGKVR 319
BLAST of CX287199 vs. ExPASy Swiss-Prot
Match: DHH1_YEAST (ATP-dependent RNA helicase DHH1 OS=Saccharomyces cerevisiae GN=DHH1 PE=1 SV=1) HSP 1 Score: 310.842 bits (795), Expect = 3.707e-84 Identity = 149/212 (70.28%), Postives = 178/212 (83.96%), Query Frame = 3 Query: 6 RELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 641 RELALQTSQV + LGKH I MVTTGGT+L+DDI+RL + VH+LVGTPGR+LDL+ + V L DCS+ +MDEADK+LS +F+ +EQ++ FLP Q L+FSATFP+TVK+F K+L KPY INLM+ELTLKGITQYYAFVEERQK+HCLNTLFSKLQINQ+IIFCNS NRVELLAKKIT+LGYSC+Y HA+M Q RN+VFH+FR G R Sbjct: 124 RELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQILSFLPPTHQSLLFSATFPLTVKEFMVKHLHKPYEINLMEELTLKGITQYYAFVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVR 335
BLAST of CX287199 vs. ExPASy Swiss-Prot
Match: DHH1_YEAS7 (ATP-dependent RNA helicase DHH1 OS=Saccharomyces cerevisiae (strain YJM789) GN=DHH1 PE=3 SV=1) HSP 1 Score: 310.842 bits (795), Expect = 3.707e-84 Identity = 149/212 (70.28%), Postives = 178/212 (83.96%), Query Frame = 3 Query: 6 RELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 641 RELALQTSQV + LGKH I MVTTGGT+L+DDI+RL + VH+LVGTPGR+LDL+ + V L DCS+ +MDEADK+LS +F+ +EQ++ FLP Q L+FSATFP+TVK+F K+L KPY INLM+ELTLKGITQYYAFVEERQK+HCLNTLFSKLQINQ+IIFCNS NRVELLAKKIT+LGYSC+Y HA+M Q RN+VFH+FR G R Sbjct: 124 RELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQILSFLPPTHQSLLFSATFPLTVKEFMVKHLHKPYEINLMEELTLKGITQYYAFVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVR 335
BLAST of CX287199 vs. ExPASy Swiss-Prot
Match: DHH1_VANPO (ATP-dependent RNA helicase DHH1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=DHH1 PE=3 SV=1) HSP 1 Score: 307.76 bits (787), Expect = 3.138e-83 Identity = 147/212 (69.34%), Postives = 178/212 (83.96%), Query Frame = 3 Query: 6 RELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 641 RELALQTSQV + LGKH I MVTTGGT+L+DDI+RL + VH+LVGTPGR+LDL+ + V L +C++ +MDEADK+LS +F+ +EQ++ FLP N Q L+FSATFP++VK+F +L KPY INLMDELTLKGITQYYAFVEE+QK+HCLNTLFSKLQINQ+IIFCNS NRVELLAKKIT+LGYSC+Y HA+M Q RNRVFH+FR G R Sbjct: 112 RELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRKVADLSECNLFIMDEADKMLSRDFKSIIEQILVFLPKNHQSLLFSATFPLSVKEFMVNHLHKPYEINLMDELTLKGITQYYAFVEEKQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNRVFHEFRQGKVR 323
BLAST of CX287199 vs. ExPASy Swiss-Prot
Match: DHH1_CANGA (ATP-dependent RNA helicase DHH1 OS=Candida glabrata GN=DHH1 PE=3 SV=1) HSP 1 Score: 307.76 bits (787), Expect = 3.138e-83 Identity = 148/212 (69.81%), Postives = 178/212 (83.96%), Query Frame = 3 Query: 6 RELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 641 RELALQTSQV + LG+H + MVTTGGT+L+DDI+RL + VH+LVGTPGR+LDL+ + V L +CS+ VMDEADK+LS +F+ +EQ++ FLP Q L+FSATFP+TVK+F K+L KPY INLM+ELTLKGITQYYAFVEERQK+HCLNTLFSKLQINQ+IIFCNS NRVELLAKKIT+LGYSC+Y HA+M Q RN+VFHDFR G R Sbjct: 109 RELALQTSQVIRTLGRHCGVSCMVTTGGTNLRDDILRLNETVHVLVGTPGRVLDLASRKVADLSECSLFVMDEADKMLSRDFKTIIEQVLTFLPKAHQSLLFSATFPLTVKEFMVKHLHKPYEINLMEELTLKGITQYYAFVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQDRNKVFHDFRQGKVR 320
BLAST of CX287199 vs. ExPASy Swiss-Prot
Match: DHH1_KLULA (ATP-dependent RNA helicase DHH1 OS=Kluyveromyces lactis GN=DHH1 PE=3 SV=1) HSP 1 Score: 307.375 bits (786), Expect = 4.099e-83 Identity = 147/212 (69.34%), Postives = 179/212 (84.43%), Query Frame = 3 Query: 6 RELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 641 RELALQTSQV + LGKH I MVTTGGT+L+DDIMRL +PVH+LVGTPGR+LDL+ + V L +C + +MDEADK+LS +F+ EQ++ FLP RQ+L+FSATFPVTVK+F K+L+ P+ INLMDELTLKGI+Q+YAFVEE+QK+HCLNTLFSKLQINQ+IIFCNS NRVELLAKKITELG+SC+Y HA+M Q RN+VFH+FR G R Sbjct: 114 RELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDIMRLNEPVHILVGTPGRVLDLASRRVTDLSECHLFIMDEADKMLSRDFKVLAEQILGFLPERRQLLLFSATFPVTVKEFMVKHLKNPHEINLMDELTLKGISQFYAFVEEKQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITELGFSCYYSHARMKQSERNKVFHEFRQGKVR 325
BLAST of CX287199 vs. ExPASy Swiss-Prot
Match: DDX6_CHICK (Probable ATP-dependent RNA helicase DDX6 OS=Gallus gallus GN=DDX6 PE=2 SV=1) HSP 1 Score: 304.294 bits (778), Expect = 3.470e-82 Identity = 148/213 (69.48%), Postives = 179/213 (84.04%), Query Frame = 3 Query: 6 RELALQTSQVCKELGKHLN-IQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 641 RELALQ SQ+C ++ KH+ +VM TTGGT+L+DDIMRL VH+++ TPGRILDL KKGV ++ M+V+DEADKLLS +F +E +I LP NRQIL++SATFP++V+ F + +LQKPY INLM+ELTLKG+TQYYA+V ERQKVHCLNTLFS+LQINQSIIFCNS RVELLAKKI++LGYSCFYIHAKM Q+HRNRVFHDFRNG CR Sbjct: 174 RELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVEHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCR 386
BLAST of CX287199 vs. ExPASy Swiss-Prot
Match: DDX6_XENTR (Probable ATP-dependent RNA helicase ddx6 OS=Xenopus tropicalis GN=ddx6 PE=2 SV=1) HSP 1 Score: 303.908 bits (777), Expect = 4.532e-82 Identity = 148/213 (69.48%), Postives = 178/213 (83.57%), Query Frame = 3 Query: 6 RELALQTSQVCKELGKHLN-IQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 641 RELALQ SQ+C ++ KH+ ++VM TTGGT+L+DDIMRL VH+++ TPGRILDL KKGV + M+V+DEADKLLS +F +E +I LP NRQIL++SATFP++V+ F +LQKPY INLM+ELTLKG+TQYYA+V ERQKVHCLNTLFS+LQINQSIIFCNS RVELLAKKI++LGYSCFYIHAKM Q+HRNRVFHDFRNG CR Sbjct: 173 RELALQVSQICIQVSKHMGGVKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHIQMIVLDEADKLLSQDFVQIMEDIIITLPKNRQILLYSATFPLSVQKFMTSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCR 385
BLAST of CX287199 vs. ExPASy Swiss-Prot
Match: DDX6_MOUSE (Probable ATP-dependent RNA helicase DDX6 OS=Mus musculus GN=Ddx6 PE=2 SV=1) HSP 1 Score: 303.523 bits (776), Expect = 5.919e-82 Identity = 148/213 (69.48%), Postives = 178/213 (83.57%), Query Frame = 3 Query: 6 RELALQTSQVCKELGKHLN-IQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 641 RELALQ SQ+C ++ KH+ +VM TTGGT+L+DDIMRL VH+++ TPGRILDL KKGV + M+V+DEADKLLS +F +E +I LP NRQIL++SATFP++V+ F + +LQKPY INLM+ELTLKG+TQYYA+V ERQKVHCLNTLFS+LQINQSIIFCNS RVELLAKKI++LGYSCFYIHAKM Q+HRNRVFHDFRNG CR Sbjct: 174 RELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCR 386
BLAST of CX287199 vs. ExPASy Swiss-Prot
Match: DDX6_HUMAN (Probable ATP-dependent RNA helicase DDX6 OS=Homo sapiens GN=DDX6 PE=1 SV=2) HSP 1 Score: 303.523 bits (776), Expect = 5.919e-82 Identity = 148/213 (69.48%), Postives = 178/213 (83.57%), Query Frame = 3 Query: 6 RELALQTSQVCKELGKHLN-IQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 641 RELALQ SQ+C ++ KH+ +VM TTGGT+L+DDIMRL VH+++ TPGRILDL KKGV + M+V+DEADKLLS +F +E +I LP NRQIL++SATFP++V+ F + +LQKPY INLM+ELTLKG+TQYYA+V ERQKVHCLNTLFS+LQINQSIIFCNS RVELLAKKI++LGYSCFYIHAKM Q+HRNRVFHDFRNG CR Sbjct: 174 RELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCR 386 The following BLAST results are available for this feature:
BLAST of CX287199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287199 ID=CX287199; Name=CX287199; organism=Citrus clementina; type=EST; length=643bpback to top |