CX287206

Overview
NameCX287206
Unique NameCX287206
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.101e-18
Identity = 68/208 (32.69%), Postives = 107/208 (51.44%), Query Frame = 2
Query:   38 YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHE-CNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGIS---KSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLI 643
            +  E+ + SR+ H  LV L G C E  +E +LVY++M  G L   L+        +L SL W  RL+I IGAA GL YLH       ++HRDV++++ILLD+    ++    LS++H Q +S+ ++  +  +    D     +   T   DVY FG VLLE++  +  I      ++    EW+      +    K  + +I+DPSLI
Sbjct:  529 FQTEIQVLSRIRHRHLVSLTGYC-EENSEMILVYEFMEKGTLKEHLY------GSNLPSLTWKQRLEICIGAARGLDYLHSSGSEGAIIHRDVKSTNILLDEHNIAKVADFGLSKIHNQDESNISINIKGTFGYL-DPEYLQTHKLTEKSDVYAFGVVLLEVLFARPAIDPYLPHEEVNLSEWV------MFCKSKGTIDEILDPSLI 722          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.437e-18
Identity = 74/223 (33.18%), Postives = 109/223 (48.88%), Query Frame = 2
Query:   38 YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTS--DASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            +  E+++ ++  H  LV L+G C E+ +E ++VY+YM  G L   L+   DL+D     L W  RL+I +GAA GL YLH      ++HRDV++++ILLDD F  ++          D  Q  ++  +       D         T   DVY FG V+LE+V G+  I   D +  RE +      + L  K  L  IIDP L+  +  LEEV     V   C
Sbjct:  528 FKTEVEMLTQFRHRHLVSLIGYCDEN-SEMIIVYEYMEKGTLKDHLY---DLDDKP--RLSWRQRLEICVGAARGLHYLHTGSTRAIIHRDVKSANILLDDNFMAKVADFGLSKTGPDLDQTHVSTAVKGSFGYLDPEYLTRQQLTEKSDVYSFGVVMLEVVCGRPVI---DPSLPREKVNLIEWAMKLVKKGKLEDIIDPFLV-GKVKLEEVKKYCEVTEKC 740          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.877e-18
Identity = 74/227 (32.60%), Postives = 113/227 (49.78%), Query Frame = 2
Query:   38 YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGD-SHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATT---REWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            ++ E++   ++ H  LV L G C +H+ + LL+Y Y+  G L S L+ V      S   L W  R +IA G A GL YLH E    ++HRDV+ S++L+D K   RLG   L+ L+ +G  S    L   +     + S +G+ ++  A DV+ FG +LLE+V G+    K  D+ T    +W+      + LH    +   IDP L    D  E   A+A+    C
Sbjct:  408 FVAEIESLGKLRHKNLVNLQGWC-KHKNDLLLIYDYIPNGSLDSLLYTVPRR---SGAVLSWNARFQIAKGIASGLLYLHEEWEKIVIHRDVKPSNVLIDSKMNPRLGDFGLARLYERGTLSETTALVGTIGYMAPELSRNGNPSS--ASDVFAFGVLLLEIVCGR----KPTDSGTFFLVDWV------MELHANGEILSAIDPRLGSGYDGGEARLALAVGLLCC 618          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.452e-18
Identity = 66/190 (34.74%), Postives = 95/190 (50.00%), Query Frame = 2
Query:   23 FKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSGSS-AATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTL 583
            F+ E  ++  + F   +H  LV L G CL+  +EK+LV++YM  G L   +   T L+        W  R+ IA   A GL +LHHEC P +VHRDV+AS++LLD     R+    L+ L   GDSH  V T         A   G +  AT   DVY +G + +EL TG+  +   ++    EW    +
Sbjct:  855 FRAEMEVLSANAFGDWAHPNLVRLYGWCLDG-SEKILVHEYMGGGSLEELITDKTKLQ--------WKKRIDIATDVARGLVFLHHECYPSIVHRDVKASNVLLDKHGNARVTDFGLARLLNVGDSH--VSTVIAGTIGYVAPEYGQTWQATTRGDVYSYGVLTMELATGRRAVDGGEECLV-EWARRVM 1032          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: SRF6_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana GN=SRF6 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.452e-18
Identity = 58/207 (28.02%), Postives = 105/207 (50.72%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAY----DVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSL 640
            + ++  +   + + H  +  L+G C EH  + L+VY++   G L   LH    L ++  ++L W +R+KIA+G A  L YLH  C+P +V +++++++ILLD +    L         G +        L  QT +  ++   + +  Y    D+Y FG V+LEL+TG+     +   + +  +    P   LHD + L K++DP+L
Sbjct:  457 DDFIEMVSKIANLDHPNVTKLVGYCAEHG-QHLVVYEFHKNGSLHDFLH----LSEEESKALVWNSRVKIALGTARALEYLHEVCSPSIVDKNIKSANILLDSELNPHLSD------SGLASFLPTANELLNQTDEGYSAPEVSMSGQYSLKSDIYSFGVVMLELLTGRKPFDSTRSRSEQSLVRWATPQ--LHDIDALAKMVDPAL 650          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.452e-18
Identity = 63/177 (35.59%), Postives = 94/177 (53.11%), Query Frame = 2
Query:   32 ESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSH-QNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDA 553
            + +  E++L S+V H  LV LLG C     E LLVY+Y+       SLH    +  D +Q L+W  R KI +G AEG++YLH E N  ++HRD++ S+ILL+D F  R+    L+ L  +  +H    +   L     +    G    T   DVY FG +++E++TGK   +   DA
Sbjct:  362 DHFFNEVNLISQVDHKNLVKLLG-CSITGPESLLVYEYIA----NQSLHDYLFVRKD-VQPLNWAKRFKIILGTAEGMAYLHEESNLRIIHRDIKLSNILLEDDFTPRIADFGLARLFPEDKTHISTAIAGTLGYMAPEYVVRGK--LTEKADVYSFGVLMIEVITGKRNNAFVQDA 530          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 3.202e-18
Identity = 71/225 (31.56%), Postives = 108/225 (48.00%), Query Frame = 2
Query:   38 YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSA-ATCAYDVYCFGKVLLELVTG---KLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            ++ E+ + S + H  LV L G C+E   + LLVY+++    LA +L    + +      LDW TR KI IG A GL+YLH E    +VHRD++A+++LLD +   ++          +   ++ TR        A         T   DVY FG V LE+V G   K+  SK++     +W+E       L +K  L +++DP L   E   EE   M  +A  C
Sbjct:  665 FLNEIGMISALHHPNLVKLYGCCVEGG-QLLLVYEFVENNSLARALFGPQETQ----LRLDWPTRRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGLAKLDEEDSTHISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHGRSNKIERSKNNTFYLIDWVE------VLREKNNLLELVDPRL-GSEYNREEAMTMIQIAIMC 877          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.182e-18
Identity = 64/178 (35.96%), Postives = 93/178 (52.25%), Query Frame = 2
Query:   29 KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVR-----LGSLSELHAQGDSHQNVLTRFLWRQTS---DASNSGSSAATCAYDVYCFGKVLLELVTGKLGIS 538
            ++ +  E++L SR+ H  LV LLG C + + E++LVY+YM  G L  +L           Q L    RL+IA+G+A G+ YLH E +PP++HRD++ S+ILLD K   +     +  L  L   G    +V T  + + T    D     S   T   DVY  G V LE++TG   IS
Sbjct:  669 QKEFFTEIELLSRLHHRNLVSLLGYC-DQKGEQMLVYEYMPNGSLQDALSA------RFRQPLSLALRLRIALGSARGILYLHTEADPPIIHRDIKPSNILLDSKMNPKVADFGISKLIALDGGGVQRDHVTT--IVKGTPGYVDPEYYLSHRLTEKSDVYSLGIVFLEILTGMRPIS 837          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.182e-18
Identity = 73/227 (32.16%), Postives = 120/227 (52.86%), Query Frame = 2
Query:   26 KKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWR-QTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKE-MLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            K + ++ E+ + S+++H  +V LLG CLE E   +LVY+++  G+L   LH     E D   +L W  R++IA+  +   SYLH     P+ HRD+++++ILLD+K+  ++       +    H +  T         D    GSS  T   DVY FG VL+EL+TG+  +    +  T+E +     +  L  +E  L +IID + I ++  LE+V A+A +A  C
Sbjct:  491 KLQEFINEVIILSQINHRHVVKLLGCCLETEVP-ILVYEFIPNGNLFQHLHE----EFDDYTAL-WGVRMRIAVDISGAFSYLHTAACSPIYHRDIKSTNILLDEKYRAKVSDFGTSRSVSIDHTHWTTVISGTVGYVDPEYYGSSHFTEKSDVYSFGVVLVELITGEKPVITLSE--TQE-ITGLADYFRLAMRENRLFEIID-ARIRNDCKLEQVIAVANLALRC 707          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: KPRO_MAIZE (Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.182e-18
Identity = 64/167 (38.32%), Postives = 88/167 (52.69%), Query Frame = 2
Query:   29 KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTG 523
            KE +  EL +  R++H  LV + G C E  + +LLV +Y+  G LA+ L       +     LDW  R  IA+G A+GL+YLHHEC   ++H DV+  +ILLD  FE ++    L +L  +G S QNV                S   T   DVY +G VLLEL+TG
Sbjct:  571 KEVFQAELSVIGRINHMNLVRIWGFCSEG-SHRLLVSEYVENGSLANIL-----FSEGGNILLDWEGRFNIALGVAKGLAYLHHECLEWVIHCDVKPENILLDQAFEPKITDFGLVKLLNRGGSTQNVSHVRGTLGYIAPEWVSSLPITAKVDVYSYGVVLLELLTG 731          
The following BLAST results are available for this feature:
BLAST of CX287206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
Y2232_ARATH1.101e-1832.69Probable receptor-like protein kinase At2g23200 OS... [more]
Y2393_ARATH1.437e-1833.18Probable receptor-like protein kinase At2g39360 OS... [more]
LRKA1_ARATH1.877e-1832.60Lectin-domain containing receptor kinase A4.1 OS=A... [more]
Y1743_ARATH2.452e-1834.74Probable LRR receptor-like serine/threonine-protei... [more]
SRF6_ARATH2.452e-1828.02Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsi... [more]
CRK3_ARATH2.452e-1835.59Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
Y1534_ARATH3.202e-1831.56Probable LRR receptor-like serine/threonine-protei... [more]
Y5374_ARATH4.182e-1835.96Probable LRR receptor-like serine/threonine-protei... [more]
WAKLL_ARATH4.182e-1832.16Putative wall-associated receptor kinase-like 13 O... [more]
KPRO_MAIZE4.182e-1838.32Putative receptor protein kinase ZmPK1 OS=Zea mays... [more]

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Properties
Property NameValue
Genbank descriptionC01005H06SK Veg1 Citrus clementina cDNA clone C01005H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287206 ID=CX287206; Name=CX287206; organism=Citrus clementina; type=EST; length=700bp
AAAAAAGGTCAGTCTGCATTCGTTCAAGAAAGAATCATACATGATGGAAT
TAGATTTGTTCAGCAGAGTTTCACATGCAAGACTGGTGCCACTTTTAGGC
CAATGCTTGGAGCATGAGACAGAGAAACTTTTGGTCTACAAATATATGGT
ATGTGGAGATTTGGCTAGTTCCTTGCACAGGGTTACAGATTTGGAGGATG
ACAGTTTACAATCCCTAGATTGGATTACAAGATTGAAAATTGCAATTGGT
GCGGCGGAAGGTTTATCCTACCTACATCATGAGTGTAACCCTCCTCTTGT
TCACAGAGATGTTCAAGCCAGCAGTATCCTTCTCGATGATAAATTTGAAG
TTCGACTTGGAAGCTTGAGTGAGCTTCATGCTCAAGGAGATTCACACCAA
AATGTGCTAACGAGATTTTTGTGGAGACAAACCTCTGATGCAAGCAATTC
AGGCTCCTCCGCGGCAACTTGTGCCTATGATGTGTACTGCTTTGGAAAAG
TCCTACTTGAGCTTGTAACTGGCAAGCTTGGTATTAGCAAATCAGATGAT
GCTACTACACGAGAGTGGTTGGAACATACACTACCTCACATCACTTTACA
CGACAAGGAAATGTTGACCAAGATCATCGACCCATCTCTGATTCTAGATG
AGGATCTACTGGAAGAAGTATGGGCCATGGCAATTGTAGCCAGATCATGC
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